10 20 30 40 50 60 70 80 2CP8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 19-MAY-05 2CP8
TITLE SOLUTION STRUCTURE OF THE RSGI RUH-046, A UBA DOMAIN FROM TITLE 2 HUMAN NEXT TO BRCA1 GENE 1 PROTEIN (KIAA0049 PROTEIN) TITLE 3 R923H VARIANT
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEXT TO BRCA1 GENE 1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBA; COMPND 5 SYNONYM: KIAA0049 PROTEIN, NEIGHBOR OF BRCA1 GENE 1 COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P040719-07; SOURCE 7 OTHER_DETAILS: CELL-FREE (E.COLI)
KEYWDS UBA DOMAIN, STRUCTURAL GENOMICS, HUMAN, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.OHASHI,H.HIROTA,T.YAMAZAKI,Y.MUTO,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2CP8 1 VERSN REVDAT 1 19-NOV-05 2CP8 0
JRNL AUTH W.OHASHI,H.HIROTA,T.YAMAZAKI,Y.MUTO,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RSGI RUH-046, A UBA JRNL TITL 2 DOMAIN FROM HUMAN NEXT TO BRCA1 GENE 1 PROTEIN JRNL TITL 3 (KIAA0049 PROTEIN) R923H VARIANT JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CP8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024473.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.62MM RSGI RUH-046 U-13C, REMARK 210 15N; 20MM TRIS-HCL U-2H, 100MM REMARK 210 NACL, 1MM DTT U-2H, 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.1, NMRPIPE 2.1, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9295, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : SIMULATED ANNELING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 33 -38.60 -134.34 REMARK 500 2 MET A 13 -34.47 -37.40 REMARK 500 2 CYS A 22 40.32 -103.16 REMARK 500 2 ILE A 38 -36.40 -34.06 REMARK 500 2 LEU A 48 48.85 -88.55 REMARK 500 3 THR A 9 -62.30 -95.26 REMARK 500 3 HIS A 15 -38.26 -34.57 REMARK 500 3 CYS A 22 30.58 -92.04 REMARK 500 3 ASN A 27 -75.02 -34.63 REMARK 500 3 HIS A 34 33.58 -95.24 REMARK 500 3 ASN A 35 37.56 37.94 REMARK 500 3 LEU A 39 -71.39 -55.41 REMARK 500 3 THR A 43 -36.18 -39.50 REMARK 500 4 ASP A 23 98.39 -34.45 REMARK 500 4 ILE A 38 -37.65 -34.98 REMARK 500 5 SER A 3 43.54 -82.79 REMARK 500 5 GLN A 8 85.54 -55.06 REMARK 500 5 THR A 9 -74.67 -112.53 REMARK 500 5 HIS A 15 -35.79 -36.05 REMARK 500 5 ASP A 23 105.92 -34.65 REMARK 500 5 ARG A 24 -70.79 -84.31 REMARK 500 5 ASN A 27 -72.56 -35.18 REMARK 500 5 ASN A 35 49.77 37.76 REMARK 500 5 ILE A 38 -35.27 -39.74 REMARK 500 5 VAL A 41 -39.67 -36.22 REMARK 500 5 SER A 53 46.51 34.40 REMARK 500 6 MET A 13 -25.97 -38.96 REMARK 500 6 ARG A 24 -70.41 -93.92 REMARK 500 6 ASN A 37 79.49 -103.66 REMARK 500 7 SER A 6 151.62 -36.87 REMARK 500 7 ALA A 11 -31.04 -37.96 REMARK 500 7 ASP A 23 96.29 -36.38 REMARK 500 7 ASN A 27 -71.07 -41.40 REMARK 500 7 HIS A 34 33.22 -99.02 REMARK 500 7 ASN A 35 36.46 39.38 REMARK 500 7 ILE A 38 -33.50 -33.95 REMARK 500 7 PRO A 51 86.18 -69.73 REMARK 500 8 SER A 5 131.81 -38.43 REMARK 500 8 ASP A 23 94.34 -36.17 REMARK 500 8 ARG A 24 -72.19 -65.13 REMARK 500 8 ASN A 35 36.47 39.19 REMARK 500 8 SER A 49 111.87 -39.14 REMARK 500 9 GLN A 8 77.93 -109.37 REMARK 500 9 THR A 9 -73.65 -101.12 REMARK 500 9 CYS A 22 45.93 -100.21 REMARK 500 9 LEU A 28 -73.47 -51.83 REMARK 500 9 ILE A 38 -33.78 -37.06 REMARK 500 9 LEU A 39 -74.61 -58.82 REMARK 500 9 LEU A 46 -36.86 -39.19 REMARK 500 10 GLN A 8 44.72 -91.34 REMARK 500 10 ALA A 11 -34.92 -36.17 REMARK 500 10 LEU A 16 -71.88 -68.32 REMARK 500 10 PHE A 17 -37.37 -39.17 REMARK 500 10 CYS A 22 48.96 -90.66 REMARK 500 10 ARG A 24 -61.39 -97.66 REMARK 500 10 LEU A 39 -73.12 -61.92 REMARK 500 10 LEU A 45 -38.96 -38.62 REMARK 500 11 SER A 2 -52.71 -125.52 REMARK 500 11 GLN A 8 42.64 -101.58 REMARK 500 11 ILE A 38 -36.82 -34.03 REMARK 500 11 THR A 43 -38.07 -34.20 REMARK 500 12 SER A 2 136.71 -38.54 REMARK 500 12 GLN A 8 41.90 -106.58 REMARK 500 12 ASP A 23 110.59 -39.07 REMARK 500 12 ASN A 35 35.21 37.37 REMARK 500 13 MET A 13 -33.45 -34.34 REMARK 500 13 HIS A 15 -36.32 -37.56 REMARK 500 13 MET A 19 -71.37 -80.17 REMARK 500 13 CYS A 22 51.74 -109.45 REMARK 500 13 HIS A 34 30.47 -96.53 REMARK 500 13 THR A 43 -30.93 -38.15 REMARK 500 14 GLN A 8 40.79 -95.28 REMARK 500 14 MET A 13 -37.25 -34.56 REMARK 500 14 ALA A 14 -73.50 -65.97 REMARK 500 14 HIS A 15 -36.56 -34.47 REMARK 500 14 ASP A 23 104.06 -35.27 REMARK 500 14 ASN A 27 -70.50 -35.31 REMARK 500 14 HIS A 34 30.30 -99.72 REMARK 500 14 LEU A 39 -70.76 -60.11 REMARK 500 15 ILE A 38 -37.20 -34.00 REMARK 500 15 LEU A 39 -71.17 -57.96 REMARK 500 15 PRO A 51 83.97 -69.81 REMARK 500 16 HIS A 15 -39.23 -35.29 REMARK 500 16 CYS A 22 48.28 -95.46 REMARK 500 16 LEU A 31 -70.48 -63.40 REMARK 500 16 ILE A 38 -34.94 -38.00 REMARK 500 17 MET A 13 -38.66 -35.36 REMARK 500 17 ASP A 23 91.24 -45.02 REMARK 500 17 LEU A 28 -72.40 -48.44 REMARK 500 17 PRO A 51 97.03 -69.79 REMARK 500 17 SER A 53 42.01 -108.80 REMARK 500 18 GLN A 8 37.51 -99.55 REMARK 500 18 CYS A 22 51.67 -94.38 REMARK 500 18 VAL A 41 -35.17 -35.26 REMARK 500 19 CYS A 22 33.43 -95.68 REMARK 500 19 LEU A 31 -71.69 -62.90 REMARK 500 19 LEU A 39 -71.11 -51.99 REMARK 500 20 CYS A 22 -71.03 -84.38 REMARK 500 20 ASP A 23 97.31 -35.47 REMARK 500 20 TYR A 36 43.81 34.26 REMARK 500 20 ILE A 38 -39.48 -33.90 REMARK 500 20 VAL A 41 -34.29 -37.14 REMARK 500 20 LEU A 48 46.04 -92.37 REMARK 500 20 SER A 53 103.91 -44.84 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100046.1 RELATED DB: TARGETDB
DBREF 2CP8 A 8 48 UNP Q14596 NBR1_HUMAN 916 956
SEQADV 2CP8 GLY A 1 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 SER A 2 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 SER A 3 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 GLY A 4 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 SER A 5 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 SER A 6 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 GLY A 7 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 HIS A 15 UNP Q14596 ARG 923 SEE REMARK 999 SEQADV 2CP8 SER A 49 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 GLY A 50 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 PRO A 51 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 SER A 52 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 SER A 53 UNP Q14596 CLONING ARTIFACT SEQADV 2CP8 GLY A 54 UNP Q14596 CLONING ARTIFACT
SEQRES 1 A 54 GLY SER SER GLY SER SER GLY GLN THR ALA ALA LEU MET SEQRES 2 A 54 ALA HIS LEU PHE GLU MET GLY PHE CYS ASP ARG GLN LEU SEQRES 3 A 54 ASN LEU ARG LEU LEU LYS LYS HIS ASN TYR ASN ILE LEU SEQRES 4 A 54 GLN VAL VAL THR GLU LEU LEU GLN LEU SER GLY PRO SER SEQRES 5 A 54 SER GLY
HELIX 1 1 GLN A 8 GLY A 20 1 13 HELIX 2 2 ASP A 23 LYS A 32 1 10 HELIX 3 3 ASN A 37 SER A 49 1 13
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000