10 20 30 40 50 60 70 80 2C8I - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRUS/RECEPTOR 05-DEC-05 2C8I
TITLE COMPLEX OF ECHOVIRUS TYPE 12 WITH DOMAINS 1, 2, 3 AND 4 OF ITS TITLE 2 RECEPTOR DECAY ACCELERATING FACTOR (CD55) BY CRYO ELECTRON MICROSCOPY TITLE 3 AT 16 A
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ECHOVIRUS 11 COAT PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: ECHOVIRUS 11 COAT PROTEIN VP2; COMPND 6 CHAIN: B; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: ECHOVIRUS 11 COAT PROTEIN VP3; COMPND 9 CHAIN: C; COMPND 10 MOL_ID: 4; COMPND 11 MOLECULE: ECHOVIRUS 11 COAT PROTEIN VP4; COMPND 12 CHAIN: D; COMPND 13 OTHER_DETAILS: STRUCTURE OF ECHOVIRUS TYPE 11 FITTED INTO CRYO-EM COMPND 14 ELECTRON DENSITY FOR ECHOVIRUS TYPE 12. THE EM DENSITY HAS BEEN COMPND 15 DEPOSITED IN THE EMDB, WITH ACCESSION CODE 1057; COMPND 16 MOL_ID: 5; COMPND 17 MOLECULE: COMPLEMENT DECAY-ACCELERATING FACTOR; COMPND 18 CHAIN: E; COMPND 19 SYNONYM: CD55; COMPND 20 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ECHOVIRUS 11; SOURCE 3 ORGANISM_TAXID: 12078; SOURCE 4 STRAIN: GREGORY; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN ECHOVIRUS 11; SOURCE 7 ORGANISM_TAXID: 12078; SOURCE 8 STRAIN: GREGORY; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN ECHOVIRUS 11; SOURCE 11 ORGANISM_TAXID: 12078; SOURCE 12 STRAIN: GREGORY; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: HUMAN ECHOVIRUS 11; SOURCE 15 ORGANISM_TAXID: 12078; SOURCE 16 STRAIN: GREGORY; SOURCE 17 MOL_ID: 5; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS PICORNAVIRUS, DAF, VIRUS-RECEPTOR COMPLEX, ANTIGEN, BLOOD GROUP KEYWDS 2 ANTIGEN, COMPLEMENT PATHWAY, GPI-ANCHOR, IMMUNE RESPONSE, INNATE KEYWDS 3 IMMUNITY, LIPOPROTEIN, PLASMA, SUSHI
EXPDTA ELECTRON MICROSCOPY
MDLTYP CA ATOMS ONLY, CHAIN A, B, C, D, E
AUTHOR D.M.PETTIGREW,D.T.WILLIAMS,D.KERRIGAN,D.J.EVANS,S.M.LEA,D.BHELLA
REVDAT 5 19-APR-17 2C8I 1 REMARK REVDAT 4 21-APR-10 2C8I 1 VERSN REVDAT 3 24-FEB-09 2C8I 1 VERSN REVDAT 2 22-FEB-06 2C8I 1 JRNL REVDAT 1 17-JAN-06 2C8I 0
JRNL AUTH D.M.PETTIGREW,D.T.WILLIAMS,D.KERRIGAN,D.J.EVANS,S.M.LEA, JRNL AUTH 2 D.BHELLA JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THE INTERACTION OF JRNL TITL 2 ECHOVIRUSES AND DECAY-ACCELERATING FACTOR. JRNL REF J.BIOL.CHEM. V. 281 5169 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16272562 JRNL DOI 10.1074/JBC.M510362200
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.BHELLA,I.G.GOODFELLOW,P.ROVERSI,D.PETTIGREW,Y.CHAUDRY, REMARK 1 AUTH 2 D.J.EVANS,S.M.LEA REMARK 1 TITL COMPLEX OF ECHOVIRUS TYPE 12 WITH DOMAINS 3 AND 4 OF ITS REMARK 1 TITL 2 RECEPTOR DECAY ACCELERATING FACTOR (CD55) BY CRYO ELECTRON REMARK 1 TITL 3 MICROSCOPY AT 16 A REMARK 1 REF J.BIOL.CHEM. V. 279 8325 2004 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 14634014 REMARK 1 DOI 10.1074/JBC.M311334200
REMARK 2 REMARK 2 RESOLUTION. 14.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EM3DR, PFT REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1H8T REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : OTHER REMARK 3 REFINEMENT TARGET : OPTIMAL CORRELATION REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : METHOD--LOCAL CORRELATION REFINEMENT PROTOCOL- REMARK 3 -LOCAL CORRELATION REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.180 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 14.00 REMARK 3 NUMBER OF PARTICLES : 1501 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: THE SEQUENCE OF THE ECHOVIRUS CAPSID PROTEINS IS REMARK 3 FROM EV11 BUT THE EM DENSITY INTO WHICH THE STRUCTURE WAS FITTED REMARK 3 IS THAT OF EV12
REMARK 4 REMARK 4 2C8I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-APR-17. REMARK 100 THE PDBE ID CODE IS EBI-26623.
REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ECHOVIRUS TYPE 12 BOUND TO REMARK 245 DECAY ACCELERATING FACTOR REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.20 REMARK 245 SAMPLE SUPPORT DETAILS : HOLEY CARBON REMARK 245 SAMPLE VITRIFICATION DETAILS : STAINED WITH AMMONIUM MOLYBDATE REMARK 245 PH 7.2. VITRIFIED IN LIQUID REMARK 245 ETHANE (CRYO-NEGATIVE STAIN) REMARK 245 SAMPLE BUFFER : PHOSPHATE BUFFERED SALINE REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : CRYO-NEGATIVE STAIN IMAGES. 96 REMARK 245 FOCAL PAIRS. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 01-SEP-04 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 100.00 REMARK 245 MICROSCOPE MODEL : JEOL 1200 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 NOMINAL CS : 3.40 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : NULL REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 30000 REMARK 245 CALIBRATED MAGNIFICATION : 29100 REMARK 245 SOURCE : LAB6 REMARK 245 ACCELERATION VOLTAGE (KV) : 120 REMARK 245 IMAGING DETAILS : NULL
REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS.
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I).
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 2 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 2 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 3 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 4 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 5 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 7 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 8 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 8 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 9 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 10 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 12 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 12 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 13 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 13 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 13 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 14 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 14 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 14 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 15 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 15 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 15 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 16 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 17 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 17 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 18 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 18 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 18 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 19 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 19 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 19 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 20 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 20 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 20 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 22 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 22 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 23 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 24 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 24 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 25 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 25 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 25 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 26 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 27 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 27 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 28 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 28 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 28 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 29 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 29 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 29 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 30 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 30 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 30 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 31 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 31 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 32 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 32 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 33 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 33 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 33 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 34 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 35 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 35 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 36 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 36 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 37 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 37 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 38 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 38 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 38 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 39 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 39 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 39 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 40 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 40 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 40 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 41 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 41 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 42 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 43 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 43 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 44 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 44 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 44 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 45 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 45 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 45 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 46 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 46 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 47 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 47 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 48 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 48 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 48 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 49 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 49 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 50 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 50 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 52 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 52 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 53 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 53 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 53 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 54 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 54 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 55 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 57 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 58 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 58 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 59 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 59 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 59 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 60 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 60 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 60 0.809017 -0.309017 -0.500000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN E -62 REMARK 465 ASP E -61 REMARK 465 CYS E -60 REMARK 465 GLY E -59 REMARK 465 LEU E -58 REMARK 465 PRO E -57 REMARK 465 PRO E -56 REMARK 465 ASP E -55 REMARK 465 VAL E -54 REMARK 465 PRO E -53 REMARK 465 ASN E -52 REMARK 465 ALA E -51 REMARK 465 GLN E -50 REMARK 465 PRO E -49 REMARK 465 ALA E -48 REMARK 465 LEU E -47 REMARK 465 GLU E -46 REMARK 465 GLY E -45 REMARK 465 ARG E -44 REMARK 465 THR E -43 REMARK 465 SER E -42 REMARK 465 PHE E -41 REMARK 465 PRO E -40 REMARK 465 GLU E -39 REMARK 465 ASP E -38 REMARK 465 THR E -37 REMARK 465 VAL E -36 REMARK 465 ILE E -35 REMARK 465 THR E -34 REMARK 465 TYR E -33 REMARK 465 LYS E -32 REMARK 465 CYS E -31 REMARK 465 GLU E -30 REMARK 465 GLU E -29 REMARK 465 SER E -28 REMARK 465 PHE E -27 REMARK 465 VAL E -26 REMARK 465 LYS E -25 REMARK 465 ILE E -24 REMARK 465 PRO E -23 REMARK 465 GLY E -22 REMARK 465 GLU E -21 REMARK 465 LYS E -20 REMARK 465 ASP E -19 REMARK 465 SER E -18 REMARK 465 VAL E -17 REMARK 465 ILE E -16 REMARK 465 CYS E -15 REMARK 465 LEU E -14 REMARK 465 LYS E -13 REMARK 465 GLY E -12 REMARK 465 SER E -11 REMARK 465 GLN E -10 REMARK 465 TRP E -9 REMARK 465 SER E -8 REMARK 465 ASP E -7 REMARK 465 ILE E -6 REMARK 465 GLU E -5 REMARK 465 GLU E -4 REMARK 465 PHE E -3 REMARK 465 CYS E -2 REMARK 465 ASN E -1 REMARK 465 ARG E 0 REMARK 465 SER E 1
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1H03 RELATED DB: PDB REMARK 900 HUMAN CD55 DOMAINS 3 & 4 REMARK 900 RELATED ID: 1H04 RELATED DB: PDB REMARK 900 HUMAN CD55 DOMAINS 3 & 4 REMARK 900 RELATED ID: 1H2P RELATED DB: PDB REMARK 900 HUMAN CD55 DOMAINS 3 & 4 REMARK 900 RELATED ID: 1H2Q RELATED DB: PDB REMARK 900 HUMAN CD55 DOMAINS 3 & 4 REMARK 900 RELATED ID: 1M11 RELATED DB: PDB REMARK 900 STRUCTURAL MODEL OF HUMAN DECAY-ACCELERATING FACTOR BOUNDTO REMARK 900 ECHOVIRUS 7 FROM CRYO- ELECTRON MICROSCOPY REMARK 900 RELATED ID: 1NWV RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF A FUNCTIONALLY ACTIVE COMPONENT OFDECAY REMARK 900 ACCELERATING FACTOR REMARK 900 RELATED ID: 1OJV RELATED DB: PDB REMARK 900 DECAY ACCELERATING FACTOR: THE STRUCTURE OF AN INTACT HUMAN REMARK 900 COMPLEMENT REGULATOR. REMARK 900 RELATED ID: 1OJW RELATED DB: PDB REMARK 900 DECAY ACCELERATING FACTOR: THE STRUCTURE OF AN INTACT HUMAN REMARK 900 COMPLEMENT REGULATOR. REMARK 900 RELATED ID: 1OJY RELATED DB: PDB REMARK 900 DECAY ACCELERATING FACTOR: THE STRUCTURE OF AN INTACT HUMAN REMARK 900 COMPLEMENT REGULATOR. REMARK 900 RELATED ID: 1OK1 RELATED DB: PDB REMARK 900 DECAY ACCELERATING FACTOR: THE STRUCTURE OF AN INTACT HUMAN REMARK 900 COMPLEMENT REGULATOR. REMARK 900 RELATED ID: 1OK2 RELATED DB: PDB REMARK 900 DECAY ACCELERATING FACTOR: THE STRUCTURE OF AN INTACT HUMAN REMARK 900 COMPLEMENT REGULATOR. REMARK 900 RELATED ID: 1OK3 RELATED DB: PDB REMARK 900 DECAY ACCELERATING FACTOR: THE STRUCTURE OF AN INTACT HUMAN REMARK 900 COMPLEMENT REGULATOR. REMARK 900 RELATED ID: 1OK9 RELATED DB: PDB REMARK 900 DECAY ACCELERATING FACTOR: THE STRUCTURE OF AN INTACT HUMAN REMARK 900 COMPLEMENT REGULATOR. REMARK 900 RELATED ID: 1UOT RELATED DB: PDB REMARK 900 HUMAN CD55 DOMAINS 3 & 4 REMARK 900 RELATED ID: 1UPN RELATED DB: PDB REMARK 900 COMPLEX OF ECHOVIRUS TYPE 12 WITH DOMAINS 3 AND 4 OF ITS RECEPTOR REMARK 900 DECAY ACCELERATING FACTOR (CD55) BY CRYO ELECTRON MICROSCOPY AT 16 A REMARK 900 RELATED ID: EMD-1182 RELATED DB: EMDB REMARK 900 STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THE INTERACTION OF REMARK 900 ECHOVIRUSES AND DECAY-ACCELERATING FACTOR REMARK 900 RELATED ID: EMD-1183 RELATED DB: EMDB REMARK 900 STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THE INTERACTION OF REMARK 900 ECHOVIRUSES AND DECAY-ACCELERATING FACTOR
DBREF 2C8I A 1 289 UNP P29813 POLG_EC11G 569 856 DBREF 2C8I B 10 261 UNP P29813 POLG_EC11G 78 329 DBREF 2C8I C 1 238 UNP P29813 POLG_EC11G 331 568 DBREF 2C8I D 2 69 UNP P29813 POLG_EC11G 22 68 DBREF 2C8I E 3 253 UNP P08174 DAF_HUMAN 1 285
SEQADV 2C8I PHE B 226 UNP P29813 SER 304 CONFLICT SEQADV 2C8I GLU C 63 UNP P29813 GLN 394 CONFLICT
SEQRES 1 A 289 GLY ASP VAL VAL GLU ALA VAL GLU ASN ALA VAL ALA ARG SEQRES 2 A 289 VAL ALA ASP THR ILE GLY SER GLY PRO SER ASN SER GLN SEQRES 3 A 289 ALA VAL PRO ALA LEU THR ALA VAL GLU THR GLY HIS THR SEQRES 4 A 289 SER GLN VAL THR PRO SER ASP THR VAL GLN THR ARG HIS SEQRES 5 A 289 VAL LYS ASN TYR HIS SER ARG SER GLU SER SER ILE GLU SEQRES 6 A 289 ASN PHE LEU SER ARG SER ALA CYS VAL TYR MET GLY GLU SEQRES 7 A 289 TYR HIS THR THR ASN SER ASP GLN THR LYS LEU PHE ALA SEQRES 8 A 289 SER TRP THR ILE SER ALA ARG ARG MET VAL GLN MET ARG SEQRES 9 A 289 ARG LYS LEU GLU ILE PHE THR TYR VAL ARG PHE ASP VAL SEQRES 10 A 289 GLU VAL THR PHE VAL ILE THR SER LYS GLN ASP GLN GLY SEQRES 11 A 289 THR GLN LEU GLY GLN ASP MET PRO PRO LEU THR HIS GLN SEQRES 12 A 289 ILE MET TYR ILE PRO PRO GLY GLY PRO ILE PRO LYS SER SEQRES 13 A 289 VAL THR ASP TYR THR TRP GLN THR SER THR ASN PRO SER SEQRES 14 A 289 ILE PHE TRP THR GLU GLY ASN ALA PRO PRO ARG MET SER SEQRES 15 A 289 ILE PRO PHE ILE SER ILE GLY ASN ALA TYR SER ASN PHE SEQRES 16 A 289 TYR ASP GLY TRP SER HIS PHE SER GLN ASN GLY VAL TYR SEQRES 17 A 289 GLY TYR ASN THR LEU ASN HIS MET GLY GLN ILE TYR VAL SEQRES 18 A 289 ARG HIS VAL ASN GLY SER SER PRO LEU PRO MET THR SER SEQRES 19 A 289 THR VAL ARG MET TYR PHE LYS PRO LYS HIS VAL LYS ALA SEQRES 20 A 289 TRP VAL PRO ARG PRO PRO ARG LEU CYS GLN TYR LYS ASN SEQRES 21 A 289 ALA SER THR VAL ASN PHE SER PRO THR ASP ILE THR ASP SEQRES 22 A 289 LYS ARG ASN SER ILE THR TYR ILE PRO ASP THR VAL LYS SEQRES 23 A 289 PRO ASP VAL SEQRES 1 B 252 SER ASP ARG VAL ARG SER ILE THR LEU GLY ASN SER THR SEQRES 2 B 252 ILE THR THR GLN GLU SER ALA ASN VAL VAL VAL GLY TYR SEQRES 3 B 252 GLY ARG TRP PRO GLU TYR LEU ARG ASP ASP GLU ALA THR SEQRES 4 B 252 ALA GLU ASP GLN PRO THR GLN PRO ASP VAL ALA THR CYS SEQRES 5 B 252 ARG PHE TYR THR LEU GLU SER VAL THR TRP GLU LYS ASP SEQRES 6 B 252 SER PRO GLY TRP TRP TRP LYS PHE PRO ASP ALA LEU LYS SEQRES 7 B 252 ASP MET GLY LEU PHE GLY GLN ASN MET TYR TYR HIS TYR SEQRES 8 B 252 LEU GLY ARG ALA GLY TYR THR ILE HIS VAL GLN CYS ASN SEQRES 9 B 252 ALA SER LYS PHE HIS GLN GLY CYS LEU LEU VAL VAL CYS SEQRES 10 B 252 VAL PRO GLU ALA GLU MET GLY CYS SER THR VAL ASP GLY SEQRES 11 B 252 THR VAL ASN GLU HIS GLY LEU SER GLU GLY GLU THR ALA SEQRES 12 B 252 LYS LYS PHE SER ALA THR GLY THR ASN GLY THR ASN THR SEQRES 13 B 252 VAL GLN SER ILE VAL THR ASN ALA GLY MET GLY VAL GLY SEQRES 14 B 252 VAL GLY ASN LEU THR ILE PHE PRO HIS GLN TRP ILE ASN SEQRES 15 B 252 LEU ARG THR ASN ASN CYS ALA THR ILE VAL MET PRO TYR SEQRES 16 B 252 ILE ASN ASN VAL PRO MET ASP ASN MET PHE ARG HIS HIS SEQRES 17 B 252 ASN PHE THR LEU MET ILE ILE PRO PHE VAL PRO LEU ASN SEQRES 18 B 252 TYR SER SER ASP PHE SER THR TYR VAL PRO ILE THR VAL SEQRES 19 B 252 THR VAL ALA PRO MET CYS ALA GLU TYR ASN GLY LEU ARG SEQRES 20 B 252 LEU SER THR ALA LEU SEQRES 1 C 238 GLY LEU PRO VAL ILE ASN THR PRO GLY SER ASN GLN PHE SEQRES 2 C 238 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 C 238 GLN PHE ASP VAL THR PRO GLU LEU ASN ILE PRO GLY GLU SEQRES 4 C 238 VAL GLN ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 C 238 VAL PRO VAL ASN ASN VAL ALA GLY ASN LEU GLU THR MET SEQRES 6 C 238 ASP ILE TYR ARG ILE PRO VAL GLN SER GLY ASN HIS GLN SEQRES 7 C 238 SER SER GLN VAL PHE GLY PHE GLN VAL GLN PRO GLY LEU SEQRES 8 C 238 ASP GLY VAL PHE LYS HIS THR LEU LEU GLY GLU ILE LEU SEQRES 9 C 238 ASN TYR TYR ALA HIS TRP SER GLY SER ILE LYS LEU THR SEQRES 10 C 238 PHE VAL PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 C 238 LEU LEU ALA TYR ALA PRO PRO GLY ALA ASN ALA PRO LYS SEQRES 12 C 238 SER ARG LYS ASP ALA MET LEU GLY THR HIS ILE ILE TRP SEQRES 13 C 238 ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS ILE PRO SEQRES 14 C 238 TRP ILE SER GLN THR HIS TYR ARG LEU VAL GLN GLN ASP SEQRES 15 C 238 GLU TYR THR SER ALA GLY ASN VAL THR CYS TRP TYR GLN SEQRES 16 C 238 THR GLY ILE VAL VAL PRO ALA GLY THR PRO THR SER CYS SEQRES 17 C 238 SER ILE MET CYS PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 C 238 VAL ARG LEU LEU LYS ASP THR PRO PHE ILE GLN GLN ALA SEQRES 19 C 238 ALA LEU LEU GLN SEQRES 1 D 60 GLY ALA GLN VAL SER THR GLN LYS THR GLY ALA HIS GLU SEQRES 2 D 60 SER ILE ILE HIS TYR THR ASN ILE ASN TYR TYR LYS ASP SEQRES 3 D 60 ALA ALA SER ASN SER ALA ASN ARG GLN ASP PHE THR GLN SEQRES 4 D 60 ASP PRO GLY LYS PHE THR GLU PRO VAL LYS ASP ILE MET SEQRES 5 D 60 VAL LYS SER LEU PRO ALA LEU ASN SEQRES 1 E 316 GLN ASP CYS GLY LEU PRO PRO ASP VAL PRO ASN ALA GLN SEQRES 2 E 316 PRO ALA LEU GLU GLY ARG THR SER PHE PRO GLU ASP THR SEQRES 3 E 316 VAL ILE THR TYR LYS CYS GLU GLU SER PHE VAL LYS ILE SEQRES 4 E 316 PRO GLY GLU LYS ASP SER VAL ILE CYS LEU LYS GLY SER SEQRES 5 E 316 GLN TRP SER ASP ILE GLU GLU PHE CYS ASN ARG SER GLN SEQRES 6 E 316 ASP CYS GLY LEU PRO PRO ASP VAL PRO ASN ALA GLN PRO SEQRES 7 E 316 ALA LEU GLU GLY ARG THR SER PHE PRO GLU ASP THR VAL SEQRES 8 E 316 ILE THR TYR LYS CYS GLU GLU SER PHE VAL LYS ILE PRO SEQRES 9 E 316 GLY GLU LYS ASP SER VAL ILE CYS LEU LYS GLY SER GLN SEQRES 10 E 316 TRP SER ASP ILE GLU GLU PHE CYS ASN ARG SER CYS GLU SEQRES 11 E 316 VAL PRO THR ARG LEU ASN SER ALA SER LEU LYS GLN PRO SEQRES 12 E 316 TYR ILE THR GLN ASN TYR PHE PRO VAL GLY THR VAL VAL SEQRES 13 E 316 GLU TYR GLU CYS ARG PRO GLY TYR ARG ARG GLU PRO SER SEQRES 14 E 316 LEU SER PRO LYS LEU THR CYS LEU GLN ASN LEU LYS TRP SEQRES 15 E 316 SER THR ALA VAL GLU PHE CYS LYS LYS LYS SER CYS PRO SEQRES 16 E 316 ASN PRO GLY GLU ILE ARG ASN GLY GLN ILE ASP VAL PRO SEQRES 17 E 316 GLY GLY ILE LEU PHE GLY ALA THR ILE SER PHE SER CYS SEQRES 18 E 316 ASN THR GLY TYR LYS LEU PHE GLY SER THR SER SER PHE SEQRES 19 E 316 CYS LEU ILE SER GLY SER SER VAL GLN TRP SER ASP PRO SEQRES 20 E 316 LEU PRO GLU CYS ARG GLU ILE TYR CYS PRO ALA PRO PRO SEQRES 21 E 316 GLN ILE ASP ASN GLY ILE ILE GLN GLY GLU ARG ASP HIS SEQRES 22 E 316 TYR GLY TYR ARG GLN SER VAL THR TYR ALA CYS ASN LYS SEQRES 23 E 316 GLY PHE THR MET ILE GLY GLU HIS SER ILE TYR CYS THR SEQRES 24 E 316 VAL ASN ASN ASP GLU GLY GLU TRP SER GLY PRO PRO PRO SEQRES 25 E 316 GLU CYS ARG GLY
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000