10 20 30 40 50 60 70 80 2BF5 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 03-DEC-04 2BF5
TITLE CRYSTAL STRUCTURE OF A TOLUENE 4-MONOOXYGENASE CATALYTIC TITLE 2 EFFECTOR PROTEIN VARIANT MISSING FOUR N-TERMINAL RESIDUES TITLE 3 (DELTA-N4 T4MOD)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLUENE-4-MONOOXYGENASE SYSTEM PROTEIN D; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 5-102; COMPND 5 SYNONYM: DELTA-N4 TOLUENE 4-MONOOXYGENASE CATALYTIC EFFECTOR; COMPND 6 EC: 1.14.13.-; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS MENDOCINA; SOURCE 3 ORGANISM_TAXID: 300; SOURCE 4 STRAIN: KR1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PJDP01; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A
KEYWDS CATALYTIC EFFECTOR PROTEIN, N-TERMINAL TRUNCATED MUTANT, AROMATIC KEYWDS 2 HYDROCARBON CATABOLISM, OXIDOREDUCTASE, MONOOXYGENASE, TOLUENE KEYWDS 3 OXIDATION, MOLECULAR REPLACEMENT
EXPDTA X-RAY DIFFRACTION
AUTHOR G.T.LOUNTOS,K.H.MITCHELL,J.M.STUDTS,B.G.FOX,A.M.ORVILLE
REVDAT 3 28-DEC-16 2BF5 1 COMPND SOURCE KEYWDS JRNL REVDAT 3 2 REMARK VERSN FORMUL MASTER REVDAT 2 24-FEB-09 2BF5 1 VERSN REVDAT 1 19-MAY-05 2BF5 0
JRNL AUTH G.T.LOUNTOS,K.H.MITCHELL,J.M.STUDTS,B.G.FOX,A.M.ORVILLE JRNL TITL CRYSTAL STRUCTURES AND FUNCTIONAL STUDIES OF T4MOD, THE JRNL TITL 2 TOLUENE 4-MONOOXYGENASE CATALYTIC EFFECTOR PROTEIN JRNL REF BIOCHEMISTRY V. 44 7131 2005 JRNL REFN ISSN 0006-2960 JRNL PMID 15882052 JRNL DOI 10.1021/BI047459G
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.M.ORVILLE,J.M.STUDTS,G.T.LOUNTOS,K.H.MITCHELL,B.G.FOX REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY ANALYSIS OF NATIVE AND REMARK 1 TITL 2 N-TERMINAL TRUNCATED ISOFORMS OF TOLUENE-4- MONOOXYGENASE REMARK 1 TITL 3 CATALYTIC EFFECTOR PROTEIN REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 59 572 2003 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 12595730 REMARK 1 DOI 10.1107/S0907444903000416 REMARK 1 REFERENCE 2 REMARK 1 AUTH H.HEMMI,J.M.STUDTS,Y.K.CHAE,J.SONG,J.L.MARKLEY,B.G.FOX REMARK 1 TITL SOLUTION STRUCTURE OF THE TOLUENE 4-MONOOXYGENASE EFFECTOR REMARK 1 TITL 2 PROTEIN (T4MOD) REMARK 1 REF BIOCHEMISTRY V. 40 3512 2001 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 11297417 REMARK 1 DOI 10.1021/BI0013703 REMARK 1 REFERENCE 3 REMARK 1 AUTH J.M.STUDTS,B.G.FOX REMARK 1 TITL APPLICATION OF FED-BATCH FERMENTATION TO THE PREPARATION OF REMARK 1 TITL 2 ISOTOPICALLY LABELED OR SELENOMETHIONYL-LABELED PROTEINS REMARK 1 REF PROTEIN EXPR.PURIF. V. 16 109 1999 REMARK 1 REFN ISSN 1046-5928 REMARK 1 PMID 10336868 REMARK 1 DOI 10.1006/PREP.1999.1067 REMARK 1 REFERENCE 4 REMARK 1 AUTH K.H.MITCHELL,J.M.STUDTS,B.G.FOX REMARK 1 TITL COMBINED PARTICIPATION OF HYDROXYLASE ACTIVE SITE RESIDUES REMARK 1 TITL 2 AND EFFECTOR PROTEIN BINDING IN A PARA TO ORTHO MODULATION REMARK 1 TITL 3 OF TOLUENE 4-MONOOXYGENASE REGIOSPECIFICITY REMARK 1 REF BIOCHEMISTRY V. 41 3176 2002 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 11863457 REMARK 1 DOI 10.1021/BI012036P REMARK 1 REFERENCE 5 REMARK 1 AUTH J.D.PIKUS,J.M.STUDTS,C.ACHIM,K.E.KAUFFMANN,E.MUNCK, REMARK 1 AUTH 2 R.J.STEFFAN,K.MCCLAY,B.G.FOX REMARK 1 TITL RECOMBINANT TOLUENE 4-MONOOXYGENASE: CATALYTIC AND REMARK 1 TITL 2 MOSSBAUER STUDIES OF THE PURIFIED DIIRON AND RIESKE REMARK 1 TITL 3 COMPONENTS OF A FOUR PROTEIN COMPLEX REMARK 1 REF BIOCHEMISTRY V. 35 9106 1996 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 8703915 REMARK 1 DOI 10.1021/BI960456M
REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2381 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1522 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1710 REMARK 3 BIN FREE R VALUE SET COUNT : 191 REMARK 3 BIN FREE R VALUE : 0.2130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1468 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 238 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.094 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.053 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.559 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1492 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1380 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2015 ; 1.583 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3206 ; 0.897 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 181 ; 6.436 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 226 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1678 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 293 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 299 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1661 ; 0.260 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 969 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 167 ; 0.204 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.199 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 66 ; 0.343 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.281 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 912 ; 1.046 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1475 ; 2.001 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 580 ; 3.291 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 540 ; 5.655 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. RESIDUES 5-10 IN CHAIN A AND CHAIN B AND REMARK 3 RESIDUE 102 IN CHAIN B WERE NOT INCLUDED DUE TO THE LACK OF REMARK 3 ELECTRON DENSITY.
REMARK 4 REMARK 4 2BF5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-DEC-04. REMARK 100 THE PDBE ID CODE IS EBI-21849.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23407 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 37.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 21.800 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 21.60 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NATIVE TOLUENE 4-MONOOXYGENASE REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.4 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM REMARK 280 2.0 M AMMONIUM SULFATE, 5% (V/V) 2-PROPANOL, AND 1.5% REMARK 280 (V/V) 1,2,3-HEPTANETRIOL.
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.10750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.10750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.10750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.10750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.10750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.10750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 43.10750 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 43.10750 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 43.10750 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 43.10750 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 43.10750 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 43.10750 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 43.10750 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 43.10750 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 43.10750 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 43.10750 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 43.10750 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 43.10750 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 HOH A2021 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2022 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2023 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 5 REMARK 465 GLN A 6 REMARK 465 ALA A 7 REMARK 465 LEU A 8 REMARK 465 HIS A 9 REMARK 465 ASN A 10 REMARK 465 ASP B 5 REMARK 465 GLN B 6 REMARK 465 ALA B 7 REMARK 465 LEU B 8 REMARK 465 HIS B 9 REMARK 465 ASN B 10
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET B 102 CA C O CB CG SD CE
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 44 CE1B TYR B 47 2.02 REMARK 500 NH2 ARG B 44 OH B TYR B 47 1.53 REMARK 500 NH2 ARG B 44 CZ B TYR B 47 2.03 REMARK 500 O HOH B 2085 O HOH B 2087 2.17 REMARK 500 O HOH B 2085 O HOH B 2090 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2034 O HOH A 2061 6456 2.04 REMARK 500 O HOH A 2053 O HOH B 2084 11556 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 45 NE - CZ - NH1 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG B 45 NE - CZ - NH2 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG B 49 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 47 64.91 -159.75 REMARK 500 SER A 82 -170.44 -171.97 REMARK 500 ARG B 45 -53.39 74.61 REMARK 500 LYS B 100 -92.47 -41.06 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BF2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NATIVE TOLUENE-4-MONOOXYGENASE REMARK 900 CATALYTIC EFFECTOR PROTEIN, T4MOD REMARK 900 RELATED ID: 2BF3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A TOLUENE 4-MONOOXYGENASE CATALYTIC REMARK 900 EFFECTOR PROTEIN VARIANT MISSING TEN N-TERMINAL REMARK 900 RESIDUES (DELTA-N10 T4MOD)
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE DELTA-N4 T4MOD VARIANT WAS CREATED WITH A VECTOR THAT REMARK 999 INITIATES PROTEIN TRANSLATION AT RESIDUE 5 IN THE OPEN REMARK 999 READING FRAME. DETAILS WILL APPEAR IN LOUNTOS ET AL, REMARK 999 BIOCHEMISTRY, SUBMITTED.
DBREF 2BF5 A 5 102 UNP Q00459 TMOD_PSEME 5 102 DBREF 2BF5 B 5 102 UNP Q00459 TMOD_PSEME 5 102
SEQRES 1 A 98 ASP GLN ALA LEU HIS ASN ASN ASN VAL GLY PRO ILE ILE SEQRES 2 A 98 ARG ALA GLY ASP LEU VAL GLU PRO VAL ILE GLU THR ALA SEQRES 3 A 98 GLU ILE ASP ASN PRO GLY LYS GLU ILE THR VAL GLU ASP SEQRES 4 A 98 ARG ARG ALA TYR VAL ARG ILE ALA ALA GLU GLY GLU LEU SEQRES 5 A 98 ILE LEU THR ARG LYS THR LEU GLU GLU GLN LEU GLY ARG SEQRES 6 A 98 PRO PHE ASN MET GLN GLU LEU GLU ILE ASN LEU ALA SER SEQRES 7 A 98 PHE ALA GLY GLN ILE GLN ALA ASP GLU ASP GLN ILE ARG SEQRES 8 A 98 PHE TYR PHE ASP LYS THR MET SEQRES 1 B 98 ASP GLN ALA LEU HIS ASN ASN ASN VAL GLY PRO ILE ILE SEQRES 2 B 98 ARG ALA GLY ASP LEU VAL GLU PRO VAL ILE GLU THR ALA SEQRES 3 B 98 GLU ILE ASP ASN PRO GLY LYS GLU ILE THR VAL GLU ASP SEQRES 4 B 98 ARG ARG ALA TYR VAL ARG ILE ALA ALA GLU GLY GLU LEU SEQRES 5 B 98 ILE LEU THR ARG LYS THR LEU GLU GLU GLN LEU GLY ARG SEQRES 6 B 98 PRO PHE ASN MET GLN GLU LEU GLU ILE ASN LEU ALA SER SEQRES 7 B 98 PHE ALA GLY GLN ILE GLN ALA ASP GLU ASP GLN ILE ARG SEQRES 8 B 98 PHE TYR PHE ASP LYS THR MET
FORMUL 3 HOH *238(H2 O)
HELIX 1 1 ALA A 19 ASP A 21 5 3 HELIX 2 2 LEU A 22 ASN A 34 1 13 HELIX 3 3 ARG A 60 GLY A 68 1 9 HELIX 4 4 ASN A 72 ILE A 78 1 7 HELIX 5 5 LEU B 22 ASN B 34 1 13 HELIX 6 6 ARG B 60 GLY B 68 1 9 HELIX 7 7 ASN B 72 ASN B 79 1 8
SHEET 1 AA 4 THR A 40 GLU A 42 0 SHEET 2 AA 4 VAL A 48 GLU A 53 -1 O ARG A 49 N GLU A 42 SHEET 3 AA 4 ASN A 12 ILE A 17 -1 O VAL A 13 N ALA A 52 SHEET 4 AA 4 LEU A 80 ALA A 84 -1 N ALA A 81 O ILE A 16 SHEET 1 AB 3 GLU A 55 THR A 59 0 SHEET 2 AB 3 GLN A 93 TYR A 97 -1 O ILE A 94 N LEU A 58 SHEET 3 AB 3 GLN A 86 ALA A 89 -1 O GLN A 86 N TYR A 97 SHEET 1 BA 4 THR B 40 ASP B 43 0 SHEET 2 BA 4 TYR B 47 GLU B 53 -1 O ARG B 49 N GLU B 42 SHEET 3 BA 4 ASN B 12 ARG B 18 -1 O VAL B 13 N ALA B 52 SHEET 4 BA 4 LEU B 80 ALA B 84 -1 N ALA B 81 O ILE B 16 SHEET 1 BB 3 GLU B 55 THR B 59 0 SHEET 2 BB 3 GLN B 93 TYR B 97 -1 O ILE B 94 N LEU B 58 SHEET 3 BB 3 GLN B 86 ALA B 89 -1 O GLN B 86 N TYR B 97
CRYST1 86.215 86.215 86.215 90.00 90.00 90.00 P 21 3 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011599 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011599 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011599 0.00000