10 20 30 40 50 60 70 80 2B5V - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 29-SEP-05 2B5V
TITLE CRYSTAL STRUCTURE OF GLUCOSE DEHYDROGENASE FROM HALOFERAX MEDITERRANEI
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.1.1.47; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOFERAX MEDITERRANEI; SOURCE 3 ORGANISM_TAXID: 2252; SOURCE 4 GENE: GDH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3A
KEYWDS NUCLEOTIDE BINDING MOTIF, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR K.L.BRITTON,P.J.BAKER,M.FISHER,S.RUZHEINIKOV,D.J.GILMOUR,M.-J.BONETE, AUTHOR 2 J.FERRER,C.PIRE,J.ESCLAPEZ,D.W.RICE
REVDAT 4 13-JUL-11 2B5V 1 VERSN REVDAT 3 24-FEB-09 2B5V 1 VERSN REVDAT 2 11-APR-06 2B5V 1 JRNL REVDAT 1 04-APR-06 2B5V 0
JRNL AUTH K.L.BRITTON,P.J.BAKER,M.FISHER,S.RUZHEINIKOV,D.J.GILMOUR, JRNL AUTH 2 M.-J.BONETE,J.FERRER,C.PIRE,J.ESCLAPEZ,D.W.RICE JRNL TITL ANALYSIS OF PROTEIN SOLVENT INTERACTIONS IN GLUCOSE JRNL TITL 2 DEHYDROGENASE FROM THE EXTREME HALOPHILE HALOFERAX JRNL TITL 3 MEDITERRANEI. JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 4846 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16551747 JRNL DOI 10.1073/PNAS.0508854103
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.FERRER,M.FISHER,J.BURKE,S.E.SEDELNIKOVA,P.J.BAKER, REMARK 1 AUTH 2 D.J.GILMOUR,M.-J.BONETE,C.PIRE,J.ESCLAPEZ,D.W.RICE REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS OF GLUCOSE REMARK 1 TITL 2 DEHYDROGENASE FROM HALOFERAX MEDITERRANEI REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 57 1887 2001 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 11717506 REMARK 1 DOI 10.1107/S0907444901015189
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5, CNS REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON,BRUNGER,ADAMS, REMARK 3 : CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG, REMARK 3 : KUSZEWSKI,NILGES,PANNU,READ,RICE, REMARK 3 : SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 28102 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1463 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2753 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2B5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-05. REMARK 100 THE RCSB ID CODE IS RCSB034712.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-00 REMARK 200 TEMPERATURE (KELVIN) : 298.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32706 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.42 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00, TEMPERATURE 290 K, VAPOR REMARK 280 DIFFUSION, HANGING DROP, VAPOR DIFFUSION, HANGING DROP
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.89550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.11250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.16600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.89550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.11250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.16600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.89550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.11250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.16600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.89550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.11250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 76.16600 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 61.79100 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 152.33200
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 554 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 572 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 627 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 10 REMARK 465 ASP A 11
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 33 -64.09 -100.51 REMARK 500 ASN A 73 -134.01 48.84 REMARK 500 THR A 95 174.28 -54.44 REMARK 500 ILE A 117 -54.03 -131.20 REMARK 500 SER A 130 148.94 -172.80 REMARK 500 ARG A 207 45.57 -147.90 REMARK 500 TYR A 240 -82.47 -117.60 REMARK 500 TRP A 278 118.87 -170.14 REMARK 500 ASN A 303 -159.75 61.83 REMARK 500 SER A 304 166.61 179.83 REMARK 500 ILE A 348 -67.78 -108.69 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 568 DISTANCE = 5.35 ANGSTROMS REMARK 525 HOH A 621 DISTANCE = 5.60 ANGSTROMS REMARK 525 HOH A 627 DISTANCE = 7.01 ANGSTROMS REMARK 525 HOH A 629 DISTANCE = 5.16 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 501
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2B5W RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF D38C GLUCOSE DEHYDROGENASE MUTANT FROM REMARK 900 HALOFERAX MEDITERRANEI
DBREF 2B5V A 1 357 UNP Q977U7 Q977U7_HALME 1 357
SEQRES 1 A 357 MET LYS ALA ILE ALA VAL LYS ARG GLY GLU ASP ARG PRO SEQRES 2 A 357 VAL VAL ILE GLU LYS PRO ARG PRO GLU PRO GLU SER GLY SEQRES 3 A 357 GLU ALA LEU VAL ARG THR LEU ARG VAL GLY VAL ASP GLY SEQRES 4 A 357 THR ASP HIS GLU VAL ILE ALA GLY GLY HIS GLY GLY PHE SEQRES 5 A 357 PRO GLU GLY GLU ASP HIS LEU VAL LEU GLY HIS GLU ALA SEQRES 6 A 357 VAL GLY VAL VAL VAL ASP PRO ASN ASP THR GLU LEU GLU SEQRES 7 A 357 GLU GLY ASP ILE VAL VAL PRO THR VAL ARG ARG PRO PRO SEQRES 8 A 357 ALA SER GLY THR ASN GLU TYR PHE GLU ARG ASP GLN PRO SEQRES 9 A 357 ASP MET ALA PRO ASP GLY MET TYR PHE GLU ARG GLY ILE SEQRES 10 A 357 VAL GLY ALA HIS GLY TYR MET SER GLU PHE PHE THR SER SEQRES 11 A 357 PRO GLU LYS TYR LEU VAL ARG ILE PRO ARG SER GLN ALA SEQRES 12 A 357 GLU LEU GLY PHE LEU ILE GLU PRO ILE SER ILE THR GLU SEQRES 13 A 357 LYS ALA LEU GLU HIS ALA TYR ALA SER ARG SER ALA PHE SEQRES 14 A 357 ASP TRP ASP PRO SER SER ALA PHE VAL LEU GLY ASN GLY SEQRES 15 A 357 SER LEU GLY LEU LEU THR LEU ALA MET LEU LYS VAL ASP SEQRES 16 A 357 ASP LYS GLY TYR GLU ASN LEU TYR CYS LEU GLY ARG ARG SEQRES 17 A 357 ASP ARG PRO ASP PRO THR ILE ASP ILE ILE GLU GLU LEU SEQRES 18 A 357 ASP ALA THR TYR VAL ASP SER ARG GLN THR PRO VAL GLU SEQRES 19 A 357 ASP VAL PRO ASP VAL TYR GLU GLN MET ASP PHE ILE TYR SEQRES 20 A 357 GLU ALA THR GLY PHE PRO LYS HIS ALA ILE GLN SER VAL SEQRES 21 A 357 GLN ALA LEU ALA PRO ASN GLY VAL GLY ALA LEU LEU GLY SEQRES 22 A 357 VAL PRO SER ASP TRP ALA PHE GLU VAL ASP ALA GLY ALA SEQRES 23 A 357 PHE HIS ARG GLU MET VAL LEU HIS ASN LYS ALA LEU VAL SEQRES 24 A 357 GLY SER VAL ASN SER HIS VAL GLU HIS PHE GLU ALA ALA SEQRES 25 A 357 THR VAL THR PHE THR LYS LEU PRO LYS TRP PHE LEU GLU SEQRES 26 A 357 ASP LEU VAL THR GLY VAL HIS PRO LEU SER GLU PHE GLU SEQRES 27 A 357 ALA ALA PHE ASP ASP ASP ASP THR THR ILE LYS THR ALA SEQRES 28 A 357 ILE GLU PHE SER THR VAL
HET NAP A 501 48
HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 HOH *146(H2 O)
HELIX 1 1 ASP A 38 GLY A 47 1 10 HELIX 2 2 ASN A 96 ARG A 101 1 6 HELIX 3 3 GLN A 103 ALA A 107 5 5 HELIX 4 4 PRO A 139 PHE A 147 5 9 HELIX 5 5 LEU A 148 SER A 165 1 18 HELIX 6 6 GLY A 182 ASP A 195 1 14 HELIX 7 7 ASP A 212 LEU A 221 1 10 HELIX 8 8 PRO A 232 GLU A 234 5 3 HELIX 9 9 ASP A 235 TYR A 240 1 6 HELIX 10 10 PHE A 252 ALA A 262 1 11 HELIX 11 11 ASP A 283 HIS A 294 1 12 HELIX 12 12 HIS A 305 LEU A 319 1 15 HELIX 13 13 PRO A 320 LEU A 327 1 8 HELIX 14 14 SER A 335 ASP A 342 5 8
SHEET 1 A 3 VAL A 14 GLU A 17 0 SHEET 2 A 3 LYS A 2 LYS A 7 -1 N ALA A 3 O ILE A 16 SHEET 3 A 3 HIS A 58 VAL A 60 -1 O LEU A 59 N VAL A 6 SHEET 1 B 5 PHE A 127 PRO A 131 0 SHEET 2 B 5 GLU A 27 VAL A 37 -1 N VAL A 30 O PHE A 128 SHEET 3 B 5 GLU A 64 ASP A 71 -1 O VAL A 68 N ARG A 31 SHEET 4 B 5 ILE A 82 PRO A 85 -1 O VAL A 83 N GLY A 67 SHEET 5 B 5 LEU A 135 ARG A 137 -1 O VAL A 136 N VAL A 84 SHEET 1 C 4 PHE A 127 PRO A 131 0 SHEET 2 C 4 GLU A 27 VAL A 37 -1 N VAL A 30 O PHE A 128 SHEET 3 C 4 LYS A 349 GLU A 353 -1 O ILE A 352 N VAL A 35 SHEET 4 C 4 VAL A 328 PRO A 333 1 N HIS A 332 O GLU A 353 SHEET 1 D 2 ARG A 88 ARG A 89 0 SHEET 2 D 2 PHE A 113 GLU A 114 -1 O PHE A 113 N ARG A 89 SHEET 1 E 6 THR A 224 ASP A 227 0 SHEET 2 E 6 ASN A 201 GLY A 206 1 N CYS A 204 O VAL A 226 SHEET 3 E 6 SER A 175 LEU A 179 1 N VAL A 178 O TYR A 203 SHEET 4 E 6 MET A 243 GLU A 248 1 O TYR A 247 N LEU A 179 SHEET 5 E 6 LEU A 263 LEU A 271 1 O ALA A 270 N ILE A 246 SHEET 6 E 6 ALA A 297 GLY A 300 1 O VAL A 299 N LEU A 271
CISPEP 1 ARG A 210 PRO A 211 0 -0.33
SITE 1 AC1 25 ASP A 38 GLY A 180 ASN A 181 GLY A 182 SITE 2 AC1 25 SER A 183 LEU A 184 GLY A 206 ARG A 207 SITE 3 AC1 25 ARG A 208 SER A 228 ALA A 249 GLY A 251 SITE 4 AC1 25 HIS A 255 LEU A 272 VAL A 274 VAL A 292 SITE 5 AC1 25 SER A 301 VAL A 302 ASN A 303 HOH A 503 SITE 6 AC1 25 HOH A 505 HOH A 543 HOH A 548 HOH A 559 SITE 7 AC1 25 HOH A 614
CRYST1 61.791 110.225 152.332 90.00 90.00 90.00 I 2 2 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016184 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009072 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006565 0.00000