10 20 30 40 50 60 70 80 2B4Y - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 27-SEP-05 2B4Y
TITLE CRYSTAL STRUCTURE OF HUMAN SIRTUIN HOMOLOG 5
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT DEACETYLASE SIRTUIN-5; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: SIR2-LIKE PROTEIN 5; COMPND 5 EC: 3.5.1.-; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SIRT5, SIR2L5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS HISTONE DEACETYLASE, STRUCTURAL GENOMICS, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR J.R.MIN,T.ANTOSHENKO,A.DONG,A.SCHUETZ,P.LOPPNAU,J.WEIGELT, AUTHOR 2 M.SUNDSTROM,C.H.ARROWSMITH,A.M.EDWARDS,A.BOCHKAREV, AUTHOR 3 A.N.PLOTNIKOV,STRUCTURAL GENOMICS CONSORTIUM (SGC)
REVDAT 2 24-FEB-09 2B4Y 1 VERSN REVDAT 1 28-FEB-06 2B4Y 0
JRNL AUTH T.ANTOSHENKO,J.R.MIN,A.SCHUETZ,P.LOPPNAU, JRNL AUTH 2 A.M.EDWARDS,C.H.ARROWSMITH,A.BOCHKAREV, JRNL AUTH 3 A.N.PLOTNIKOV JRNL TITL CRYSTAL STRUCTURE OF HUMAN SIRTUIN HOMOLOG 5 IN JRNL TITL 2 COMPLEX WITH NAD JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 75815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3994 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4427 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 253 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8015 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 208 REMARK 3 SOLVENT ATOMS : 707 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50000 REMARK 3 B22 (A**2) : 1.34000 REMARK 3 B33 (A**2) : -0.94000 REMARK 3 B12 (A**2) : -0.55000 REMARK 3 B13 (A**2) : 0.21000 REMARK 3 B23 (A**2) : -0.17000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.014 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8434 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11473 ; 1.822 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1039 ; 6.086 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 356 ;37.436 ;22.809 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1291 ;15.476 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 68 ;17.849 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1248 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6366 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3743 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5570 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 613 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 106 ; 0.178 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 32 ; 0.210 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5388 ; 1.059 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8379 ; 1.620 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3504 ; 2.879 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3094 ; 4.140 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 2B4Y COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-05. REMARK 100 THE RCSB ID CODE IS RCSB034680.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79819 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 1ICI REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 4000, 0.1M HEPES, PH 7.5, REMARK 280 10% ISOPROPANOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 273K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 32 REMARK 465 SER A 33 REMARK 465 ALA A 34 REMARK 465 ARG A 35 REMARK 465 PRO A 68 REMARK 465 THR A 69 REMARK 465 PHE A 70 REMARK 465 ARG A 71 REMARK 465 GLY A 72 REMARK 465 ALA A 73 REMARK 465 GLY A 74 REMARK 465 GLY B 32 REMARK 465 SER B 33 REMARK 465 ALA B 34 REMARK 465 ARG B 35 REMARK 465 PHE B 70 REMARK 465 ARG B 71 REMARK 465 GLY B 72 REMARK 465 ALA B 73 REMARK 465 GLY B 74 REMARK 465 GLY C 32 REMARK 465 SER C 33 REMARK 465 ALA C 34 REMARK 465 ARG C 35 REMARK 465 GLY C 72 REMARK 465 ALA C 73 REMARK 465 GLY C 74 REMARK 465 GLY C 75 REMARK 465 GLY D 32 REMARK 465 SER D 33 REMARK 465 ALA D 34 REMARK 465 ARG D 35 REMARK 465 ARG D 71 REMARK 465 GLY D 72 REMARK 465 ALA D 73 REMARK 465 GLY D 74 REMARK 465 GLY D 75
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG C 71 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 76 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR D 76 CG CD1 CD2 CE1 CE2 CZ OH
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG D 127 N GLY D 129 1.88 REMARK 500 O ALA B 149 O HOH B 2183 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2161 O HOH B 2186 1455 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 106 CG - CD - NE ANGL. DEV. = -13.0 DEGREES REMARK 500 ARG A 106 CD - NE - CZ ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG A 106 NE - CZ - NH1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG A 106 NE - CZ - NH2 ANGL. DEV. = -11.3 DEGREES REMARK 500 ARG A 267 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 267 NE - CZ - NH2 ANGL. DEV. = -7.9 DEGREES REMARK 500 ARG C 206 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG C 206 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 78 -128.71 56.31 REMARK 500 ARG B 78 -132.22 55.95 REMARK 500 SER B 168 -64.42 -90.64 REMARK 500 CYS B 212 -71.52 -103.85 REMARK 500 ARG C 78 -129.05 50.20 REMARK 500 SER C 168 -61.54 -96.79 REMARK 500 SER C 198 64.45 38.49 REMARK 500 CYS C 212 -78.69 -101.95 REMARK 500 ALA C 266 -4.98 -56.11 REMARK 500 ARG D 78 -130.67 49.09 REMARK 500 ASN D 94 75.39 -150.88 REMARK 500 ARG D 127 -101.55 -66.44 REMARK 500 LEU D 128 -46.18 -3.61 REMARK 500 GLN D 131 -152.99 -74.47 REMARK 500 GLU D 144 16.55 56.22 REMARK 500 CYS D 212 -83.11 -108.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY D 132 ARG D 133 -145.44 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 166 SG REMARK 620 2 CYS A 169 SG 109.3 REMARK 620 3 CYS A 207 SG 104.2 112.2 REMARK 620 4 CYS A 212 SG 101.1 118.5 109.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 166 SG REMARK 620 2 CYS B 169 SG 105.2 REMARK 620 3 CYS B 207 SG 104.7 114.0 REMARK 620 4 CYS B 212 SG 103.8 114.0 113.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C3001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 166 SG REMARK 620 2 CYS C 169 SG 105.2 REMARK 620 3 CYS C 207 SG 108.2 114.0 REMARK 620 4 CYS C 212 SG 104.8 114.3 109.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D4001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 166 SG REMARK 620 2 CYS D 169 SG 107.3 REMARK 620 3 CYS D 207 SG 107.4 109.5 REMARK 620 4 CYS D 212 SG 104.1 116.6 111.3 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2001 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 3001 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 4001 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR A 1002 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR B 2002 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR C 3002 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR D 4002 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 1003 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE B 2003 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE C 3003 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE D 4003
DBREF 2B4Y A 34 302 UNP Q9NXA8 SIRT5_HUMAN 34 302 DBREF 2B4Y B 34 302 UNP Q9NXA8 SIRT5_HUMAN 34 302 DBREF 2B4Y C 34 302 UNP Q9NXA8 SIRT5_HUMAN 34 302 DBREF 2B4Y D 34 302 UNP Q9NXA8 SIRT5_HUMAN 34 302
SEQADV 2B4Y GLY A 32 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y SER A 33 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y MSE A 40 UNP Q9NXA8 MET 40 MODIFIED RESIDUE SEQADV 2B4Y MSE A 109 UNP Q9NXA8 MET 109 MODIFIED RESIDUE SEQADV 2B4Y MSE A 259 UNP Q9NXA8 MET 259 MODIFIED RESIDUE SEQADV 2B4Y GLY B 32 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y SER B 33 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y MSE B 40 UNP Q9NXA8 MET 40 MODIFIED RESIDUE SEQADV 2B4Y MSE B 109 UNP Q9NXA8 MET 109 MODIFIED RESIDUE SEQADV 2B4Y MSE B 259 UNP Q9NXA8 MET 259 MODIFIED RESIDUE SEQADV 2B4Y GLY C 32 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y SER C 33 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y MSE C 40 UNP Q9NXA8 MET 40 MODIFIED RESIDUE SEQADV 2B4Y MSE C 109 UNP Q9NXA8 MET 109 MODIFIED RESIDUE SEQADV 2B4Y MSE C 259 UNP Q9NXA8 MET 259 MODIFIED RESIDUE SEQADV 2B4Y GLY D 32 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y SER D 33 UNP Q9NXA8 CLONING ARTIFACT SEQADV 2B4Y MSE D 40 UNP Q9NXA8 MET 40 MODIFIED RESIDUE SEQADV 2B4Y MSE D 109 UNP Q9NXA8 MET 109 MODIFIED RESIDUE SEQADV 2B4Y MSE D 259 UNP Q9NXA8 MET 259 MODIFIED RESIDUE
SEQRES 1 A 271 GLY SER ALA ARG PRO SER SER SER MSE ALA ASP PHE ARG SEQRES 2 A 271 LYS PHE PHE ALA LYS ALA LYS HIS ILE VAL ILE ILE SER SEQRES 3 A 271 GLY ALA GLY VAL SER ALA GLU SER GLY VAL PRO THR PHE SEQRES 4 A 271 ARG GLY ALA GLY GLY TYR TRP ARG LYS TRP GLN ALA GLN SEQRES 5 A 271 ASP LEU ALA THR PRO LEU ALA PHE ALA HIS ASN PRO SER SEQRES 6 A 271 ARG VAL TRP GLU PHE TYR HIS TYR ARG ARG GLU VAL MSE SEQRES 7 A 271 GLY SER LYS GLU PRO ASN ALA GLY HIS ARG ALA ILE ALA SEQRES 8 A 271 GLU CYS GLU THR ARG LEU GLY LYS GLN GLY ARG ARG VAL SEQRES 9 A 271 VAL VAL ILE THR GLN ASN ILE ASP GLU LEU HIS ARG LYS SEQRES 10 A 271 ALA GLY THR LYS ASN LEU LEU GLU ILE HIS GLY SER LEU SEQRES 11 A 271 PHE LYS THR ARG CYS THR SER CYS GLY VAL VAL ALA GLU SEQRES 12 A 271 ASN TYR LYS SER PRO ILE CYS PRO ALA LEU SER GLY LYS SEQRES 13 A 271 GLY ALA PRO GLU PRO GLY THR GLN ASP ALA SER ILE PRO SEQRES 14 A 271 VAL GLU LYS LEU PRO ARG CYS GLU GLU ALA GLY CYS GLY SEQRES 15 A 271 GLY LEU LEU ARG PRO HIS VAL VAL TRP PHE GLY GLU ASN SEQRES 16 A 271 LEU ASP PRO ALA ILE LEU GLU GLU VAL ASP ARG GLU LEU SEQRES 17 A 271 ALA HIS CYS ASP LEU CYS LEU VAL VAL GLY THR SER SER SEQRES 18 A 271 VAL VAL TYR PRO ALA ALA MSE PHE ALA PRO GLN VAL ALA SEQRES 19 A 271 ALA ARG GLY VAL PRO VAL ALA GLU PHE ASN THR GLU THR SEQRES 20 A 271 THR PRO ALA THR ASN ARG PHE ARG PHE HIS PHE GLN GLY SEQRES 21 A 271 PRO CYS GLY THR THR LEU PRO GLU ALA LEU ALA SEQRES 1 B 271 GLY SER ALA ARG PRO SER SER SER MSE ALA ASP PHE ARG SEQRES 2 B 271 LYS PHE PHE ALA LYS ALA LYS HIS ILE VAL ILE ILE SER SEQRES 3 B 271 GLY ALA GLY VAL SER ALA GLU SER GLY VAL PRO THR PHE SEQRES 4 B 271 ARG GLY ALA GLY GLY TYR TRP ARG LYS TRP GLN ALA GLN SEQRES 5 B 271 ASP LEU ALA THR PRO LEU ALA PHE ALA HIS ASN PRO SER SEQRES 6 B 271 ARG VAL TRP GLU PHE TYR HIS TYR ARG ARG GLU VAL MSE SEQRES 7 B 271 GLY SER LYS GLU PRO ASN ALA GLY HIS ARG ALA ILE ALA SEQRES 8 B 271 GLU CYS GLU THR ARG LEU GLY LYS GLN GLY ARG ARG VAL SEQRES 9 B 271 VAL VAL ILE THR GLN ASN ILE ASP GLU LEU HIS ARG LYS SEQRES 10 B 271 ALA GLY THR LYS ASN LEU LEU GLU ILE HIS GLY SER LEU SEQRES 11 B 271 PHE LYS THR ARG CYS THR SER CYS GLY VAL VAL ALA GLU SEQRES 12 B 271 ASN TYR LYS SER PRO ILE CYS PRO ALA LEU SER GLY LYS SEQRES 13 B 271 GLY ALA PRO GLU PRO GLY THR GLN ASP ALA SER ILE PRO SEQRES 14 B 271 VAL GLU LYS LEU PRO ARG CYS GLU GLU ALA GLY CYS GLY SEQRES 15 B 271 GLY LEU LEU ARG PRO HIS VAL VAL TRP PHE GLY GLU ASN SEQRES 16 B 271 LEU ASP PRO ALA ILE LEU GLU GLU VAL ASP ARG GLU LEU SEQRES 17 B 271 ALA HIS CYS ASP LEU CYS LEU VAL VAL GLY THR SER SER SEQRES 18 B 271 VAL VAL TYR PRO ALA ALA MSE PHE ALA PRO GLN VAL ALA SEQRES 19 B 271 ALA ARG GLY VAL PRO VAL ALA GLU PHE ASN THR GLU THR SEQRES 20 B 271 THR PRO ALA THR ASN ARG PHE ARG PHE HIS PHE GLN GLY SEQRES 21 B 271 PRO CYS GLY THR THR LEU PRO GLU ALA LEU ALA SEQRES 1 C 271 GLY SER ALA ARG PRO SER SER SER MSE ALA ASP PHE ARG SEQRES 2 C 271 LYS PHE PHE ALA LYS ALA LYS HIS ILE VAL ILE ILE SER SEQRES 3 C 271 GLY ALA GLY VAL SER ALA GLU SER GLY VAL PRO THR PHE SEQRES 4 C 271 ARG GLY ALA GLY GLY TYR TRP ARG LYS TRP GLN ALA GLN SEQRES 5 C 271 ASP LEU ALA THR PRO LEU ALA PHE ALA HIS ASN PRO SER SEQRES 6 C 271 ARG VAL TRP GLU PHE TYR HIS TYR ARG ARG GLU VAL MSE SEQRES 7 C 271 GLY SER LYS GLU PRO ASN ALA GLY HIS ARG ALA ILE ALA SEQRES 8 C 271 GLU CYS GLU THR ARG LEU GLY LYS GLN GLY ARG ARG VAL SEQRES 9 C 271 VAL VAL ILE THR GLN ASN ILE ASP GLU LEU HIS ARG LYS SEQRES 10 C 271 ALA GLY THR LYS ASN LEU LEU GLU ILE HIS GLY SER LEU SEQRES 11 C 271 PHE LYS THR ARG CYS THR SER CYS GLY VAL VAL ALA GLU SEQRES 12 C 271 ASN TYR LYS SER PRO ILE CYS PRO ALA LEU SER GLY LYS SEQRES 13 C 271 GLY ALA PRO GLU PRO GLY THR GLN ASP ALA SER ILE PRO SEQRES 14 C 271 VAL GLU LYS LEU PRO ARG CYS GLU GLU ALA GLY CYS GLY SEQRES 15 C 271 GLY LEU LEU ARG PRO HIS VAL VAL TRP PHE GLY GLU ASN SEQRES 16 C 271 LEU ASP PRO ALA ILE LEU GLU GLU VAL ASP ARG GLU LEU SEQRES 17 C 271 ALA HIS CYS ASP LEU CYS LEU VAL VAL GLY THR SER SER SEQRES 18 C 271 VAL VAL TYR PRO ALA ALA MSE PHE ALA PRO GLN VAL ALA SEQRES 19 C 271 ALA ARG GLY VAL PRO VAL ALA GLU PHE ASN THR GLU THR SEQRES 20 C 271 THR PRO ALA THR ASN ARG PHE ARG PHE HIS PHE GLN GLY SEQRES 21 C 271 PRO CYS GLY THR THR LEU PRO GLU ALA LEU ALA SEQRES 1 D 271 GLY SER ALA ARG PRO SER SER SER MSE ALA ASP PHE ARG SEQRES 2 D 271 LYS PHE PHE ALA LYS ALA LYS HIS ILE VAL ILE ILE SER SEQRES 3 D 271 GLY ALA GLY VAL SER ALA GLU SER GLY VAL PRO THR PHE SEQRES 4 D 271 ARG GLY ALA GLY GLY TYR TRP ARG LYS TRP GLN ALA GLN SEQRES 5 D 271 ASP LEU ALA THR PRO LEU ALA PHE ALA HIS ASN PRO SER SEQRES 6 D 271 ARG VAL TRP GLU PHE TYR HIS TYR ARG ARG GLU VAL MSE SEQRES 7 D 271 GLY SER LYS GLU PRO ASN ALA GLY HIS ARG ALA ILE ALA SEQRES 8 D 271 GLU CYS GLU THR ARG LEU GLY LYS GLN GLY ARG ARG VAL SEQRES 9 D 271 VAL VAL ILE THR GLN ASN ILE ASP GLU LEU HIS ARG LYS SEQRES 10 D 271 ALA GLY THR LYS ASN LEU LEU GLU ILE HIS GLY SER LEU SEQRES 11 D 271 PHE LYS THR ARG CYS THR SER CYS GLY VAL VAL ALA GLU SEQRES 12 D 271 ASN TYR LYS SER PRO ILE CYS PRO ALA LEU SER GLY LYS SEQRES 13 D 271 GLY ALA PRO GLU PRO GLY THR GLN ASP ALA SER ILE PRO SEQRES 14 D 271 VAL GLU LYS LEU PRO ARG CYS GLU GLU ALA GLY CYS GLY SEQRES 15 D 271 GLY LEU LEU ARG PRO HIS VAL VAL TRP PHE GLY GLU ASN SEQRES 16 D 271 LEU ASP PRO ALA ILE LEU GLU GLU VAL ASP ARG GLU LEU SEQRES 17 D 271 ALA HIS CYS ASP LEU CYS LEU VAL VAL GLY THR SER SER SEQRES 18 D 271 VAL VAL TYR PRO ALA ALA MSE PHE ALA PRO GLN VAL ALA SEQRES 19 D 271 ALA ARG GLY VAL PRO VAL ALA GLU PHE ASN THR GLU THR SEQRES 20 D 271 THR PRO ALA THR ASN ARG PHE ARG PHE HIS PHE GLN GLY SEQRES 21 D 271 PRO CYS GLY THR THR LEU PRO GLU ALA LEU ALA
MODRES 2B4Y MSE A 40 MET SELENOMETHIONINE MODRES 2B4Y MSE A 109 MET SELENOMETHIONINE MODRES 2B4Y MSE A 259 MET SELENOMETHIONINE MODRES 2B4Y MSE B 40 MET SELENOMETHIONINE MODRES 2B4Y MSE B 109 MET SELENOMETHIONINE MODRES 2B4Y MSE B 259 MET SELENOMETHIONINE MODRES 2B4Y MSE C 40 MET SELENOMETHIONINE MODRES 2B4Y MSE C 109 MET SELENOMETHIONINE MODRES 2B4Y MSE C 259 MET SELENOMETHIONINE MODRES 2B4Y MSE D 40 MET SELENOMETHIONINE MODRES 2B4Y MSE D 109 MET SELENOMETHIONINE MODRES 2B4Y MSE D 259 MET SELENOMETHIONINE
HET MSE A 40 8 HET MSE A 109 8 HET MSE A 259 8 HET MSE B 40 8 HET MSE B 109 8 HET MSE B 259 8 HET MSE C 40 8 HET MSE C 109 8 HET MSE C 259 8 HET MSE D 40 8 HET MSE D 109 8 HET MSE D 259 8 HET ZN A1001 1 HET ZN B2001 1 HET ZN C3001 1 HET ZN D4001 1 HET APR A1002 36 HET APR B2002 36 HET APR C3002 36 HET APR D4002 36 HET EPE A1003 15 HET EPE B2003 15 HET EPE C3003 15 HET EPE D4003 15
HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM APR ADENOSINE-5-DIPHOSPHORIBOSE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HETSYN EPE HEPES
FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 ZN 4(ZN 2+) FORMUL 9 APR 4(C15 H23 N5 O14 P2) FORMUL 13 EPE 4(C8 H18 N2 O4 S) FORMUL 17 HOH *707(H2 O)
HELIX 1 1 SER A 39 ALA A 50 1 12 HELIX 2 2 ALA A 59 GLY A 66 5 8 HELIX 3 3 GLN A 81 ALA A 86 1 6 HELIX 4 4 THR A 87 ASN A 94 1 8 HELIX 5 5 ASN A 94 SER A 111 1 18 HELIX 6 6 ASN A 115 LYS A 130 1 16 HELIX 7 7 GLU A 144 GLY A 150 1 7 HELIX 8 8 CYS A 181 SER A 185 5 5 HELIX 9 9 PRO A 200 LEU A 204 5 5 HELIX 10 10 ASP A 228 CYS A 242 1 15 HELIX 11 11 PRO A 256 ALA A 258 5 3 HELIX 12 12 MSE A 259 ARG A 267 1 9 HELIX 13 13 ALA A 281 PHE A 285 5 5 HELIX 14 14 PRO A 292 LEU A 301 1 10 HELIX 15 15 SER B 39 ALA B 50 1 12 HELIX 16 16 ALA B 59 GLY B 66 5 8 HELIX 17 17 GLN B 81 LEU B 85 5 5 HELIX 18 18 THR B 87 ASN B 94 1 8 HELIX 19 19 ASN B 94 SER B 111 1 18 HELIX 20 20 ASN B 115 LYS B 130 1 16 HELIX 21 21 GLU B 144 ALA B 149 1 6 HELIX 22 22 CYS B 181 SER B 185 5 5 HELIX 23 23 PRO B 200 LEU B 204 5 5 HELIX 24 24 ASP B 228 CYS B 242 1 15 HELIX 25 25 PRO B 256 ALA B 258 5 3 HELIX 26 26 MSE B 259 ARG B 267 1 9 HELIX 27 27 ALA B 281 PHE B 285 5 5 HELIX 28 28 PRO B 292 LEU B 301 1 10 HELIX 29 29 SER C 39 ALA C 50 1 12 HELIX 30 30 ALA C 59 GLY C 66 5 8 HELIX 31 31 GLN C 81 ALA C 86 1 6 HELIX 32 32 THR C 87 ASN C 94 1 8 HELIX 33 33 ASN C 94 GLY C 110 1 17 HELIX 34 34 ASN C 115 GLN C 131 1 17 HELIX 35 35 GLU C 144 GLY C 150 1 7 HELIX 36 36 CYS C 181 SER C 185 5 5 HELIX 37 37 PRO C 200 LEU C 204 5 5 HELIX 38 38 ASP C 228 CYS C 242 1 15 HELIX 39 39 PRO C 256 ALA C 258 5 3 HELIX 40 40 MSE C 259 ALA C 266 1 8 HELIX 41 41 ALA C 281 PHE C 285 5 5 HELIX 42 42 PRO C 292 ALA C 302 1 11 HELIX 43 43 SER D 39 ALA D 50 1 12 HELIX 44 44 ALA D 59 GLY D 66 5 8 HELIX 45 45 GLN D 81 ALA D 86 1 6 HELIX 46 46 THR D 87 ASN D 94 1 8 HELIX 47 47 ASN D 94 GLY D 110 1 17 HELIX 48 48 ASN D 115 ARG D 127 1 13 HELIX 49 49 GLU D 144 ALA D 149 1 6 HELIX 50 50 CYS D 181 SER D 185 5 5 HELIX 51 51 PRO D 200 LEU D 204 5 5 HELIX 52 52 ASP D 228 CYS D 242 1 15 HELIX 53 53 PRO D 256 ALA D 258 5 3 HELIX 54 54 MSE D 259 ARG D 267 1 9 HELIX 55 55 ALA D 281 PHE D 285 5 5 HELIX 56 56 PRO D 292 ALA D 302 1 11
SHEET 1 A 6 LEU A 154 GLU A 156 0 SHEET 2 A 6 ARG A 134 THR A 139 1 N VAL A 137 O LEU A 155 SHEET 3 A 6 HIS A 52 SER A 57 1 N ILE A 55 O ILE A 138 SHEET 4 A 6 LEU A 244 VAL A 248 1 O VAL A 248 N ILE A 56 SHEET 5 A 6 VAL A 271 ASN A 275 1 O ALA A 272 N CYS A 245 SHEET 6 A 6 PHE A 287 GLN A 290 1 O PHE A 289 N GLU A 273 SHEET 1 B 3 VAL A 172 GLU A 174 0 SHEET 2 B 3 GLY A 159 CYS A 166 -1 N THR A 164 O ALA A 173 SHEET 3 B 3 LEU A 216 VAL A 220 -1 O ARG A 217 N ARG A 165 SHEET 1 C 6 LEU B 154 GLU B 156 0 SHEET 2 C 6 ARG B 134 THR B 139 1 N THR B 139 O LEU B 155 SHEET 3 C 6 HIS B 52 SER B 57 1 N ILE B 53 O ARG B 134 SHEET 4 C 6 LEU B 244 VAL B 248 1 O VAL B 248 N ILE B 56 SHEET 5 C 6 VAL B 271 ASN B 275 1 O ALA B 272 N CYS B 245 SHEET 6 C 6 PHE B 287 GLN B 290 1 O PHE B 289 N GLU B 273 SHEET 1 D 3 VAL B 172 GLU B 174 0 SHEET 2 D 3 GLY B 159 CYS B 166 -1 N THR B 164 O ALA B 173 SHEET 3 D 3 LEU B 216 VAL B 220 -1 O ARG B 217 N ARG B 165 SHEET 1 E 6 LEU C 154 GLU C 156 0 SHEET 2 E 6 ARG C 134 THR C 139 1 N VAL C 137 O LEU C 155 SHEET 3 E 6 HIS C 52 SER C 57 1 N ILE C 53 O ARG C 134 SHEET 4 E 6 LEU C 244 VAL C 248 1 O LEU C 246 N ILE C 56 SHEET 5 E 6 VAL C 271 ASN C 275 1 O ALA C 272 N VAL C 247 SHEET 6 E 6 PHE C 287 GLN C 290 1 O PHE C 289 N GLU C 273 SHEET 1 F 3 VAL C 172 GLU C 174 0 SHEET 2 F 3 GLY C 159 CYS C 166 -1 N THR C 164 O ALA C 173 SHEET 3 F 3 LEU C 216 VAL C 220 -1 O HIS C 219 N SER C 160 SHEET 1 G 6 LEU D 154 GLU D 156 0 SHEET 2 G 6 ARG D 134 THR D 139 1 N VAL D 137 O LEU D 155 SHEET 3 G 6 HIS D 52 SER D 57 1 N ILE D 55 O ILE D 138 SHEET 4 G 6 LEU D 244 VAL D 248 1 O LEU D 246 N ILE D 56 SHEET 5 G 6 VAL D 271 ASN D 275 1 O ALA D 272 N VAL D 247 SHEET 6 G 6 PHE D 287 GLN D 290 1 O PHE D 287 N GLU D 273 SHEET 1 H 3 VAL D 172 GLU D 174 0 SHEET 2 H 3 GLY D 159 CYS D 166 -1 N THR D 164 O ALA D 173 SHEET 3 H 3 LEU D 216 VAL D 220 -1 O HIS D 219 N LYS D 163
LINK ZN ZN A1001 SG CYS A 166 1555 1555 2.35 LINK ZN ZN A1001 SG CYS A 169 1555 1555 2.34 LINK ZN ZN A1001 SG CYS A 207 1555 1555 2.14 LINK ZN ZN A1001 SG CYS A 212 1555 1555 2.41 LINK ZN ZN B2001 SG CYS B 166 1555 1555 2.39 LINK ZN ZN B2001 SG CYS B 169 1555 1555 2.34 LINK ZN ZN B2001 SG CYS B 207 1555 1555 2.32 LINK ZN ZN B2001 SG CYS B 212 1555 1555 2.35 LINK ZN ZN C3001 SG CYS C 166 1555 1555 2.35 LINK ZN ZN C3001 SG CYS C 169 1555 1555 2.34 LINK ZN ZN C3001 SG CYS C 207 1555 1555 2.39 LINK ZN ZN C3001 SG CYS C 212 1555 1555 2.41 LINK ZN ZN D4001 SG CYS D 166 1555 1555 2.39 LINK ZN ZN D4001 SG CYS D 169 1555 1555 2.27 LINK ZN ZN D4001 SG CYS D 207 1555 1555 2.34 LINK ZN ZN D4001 SG CYS D 212 1555 1555 2.36 LINK C SER A 39 N MSE A 40 1555 1555 1.33 LINK C MSE A 40 N ALA A 41 1555 1555 1.34 LINK C VAL A 108 N MSE A 109 1555 1555 1.33 LINK C MSE A 109 N GLY A 110 1555 1555 1.33 LINK C ALA A 258 N MSE A 259 1555 1555 1.33 LINK C MSE A 259 N PHE A 260 1555 1555 1.34 LINK C SER B 39 N MSE B 40 1555 1555 1.32 LINK C MSE B 40 N ALA B 41 1555 1555 1.34 LINK C VAL B 108 N MSE B 109 1555 1555 1.35 LINK C MSE B 109 N GLY B 110 1555 1555 1.33 LINK C ALA B 258 N MSE B 259 1555 1555 1.33 LINK C MSE B 259 N PHE B 260 1555 1555 1.34 LINK C SER C 39 N MSE C 40 1555 1555 1.33 LINK C MSE C 40 N ALA C 41 1555 1555 1.34 LINK C VAL C 108 N MSE C 109 1555 1555 1.33 LINK C MSE C 109 N GLY C 110 1555 1555 1.33 LINK C ALA C 258 N MSE C 259 1555 1555 1.33 LINK C MSE C 259 N PHE C 260 1555 1555 1.34 LINK C SER D 39 N MSE D 40 1555 1555 1.33 LINK C MSE D 40 N ALA D 41 1555 1555 1.34 LINK C VAL D 108 N MSE D 109 1555 1555 1.35 LINK C MSE D 109 N GLY D 110 1555 1555 1.33 LINK C ALA D 258 N MSE D 259 1555 1555 1.33 LINK C MSE D 259 N PHE D 260 1555 1555 1.33
CISPEP 1 SER A 178 PRO A 179 0 -4.70 CISPEP 2 TYR A 255 PRO A 256 0 -1.08 CISPEP 3 SER B 178 PRO B 179 0 -4.98 CISPEP 4 TYR B 255 PRO B 256 0 -5.97 CISPEP 5 SER C 178 PRO C 179 0 0.91 CISPEP 6 TYR C 255 PRO C 256 0 1.69 CISPEP 7 SER D 178 PRO D 179 0 0.46 CISPEP 8 TYR D 255 PRO D 256 0 -1.31
SITE 1 AC1 4 CYS A 166 CYS A 169 CYS A 207 CYS A 212 SITE 1 AC2 4 CYS B 166 CYS B 169 CYS B 207 CYS B 212 SITE 1 AC3 4 CYS C 166 CYS C 169 CYS C 207 CYS C 212 SITE 1 AC4 4 CYS D 166 CYS D 169 CYS D 207 CYS D 212 SITE 1 AC5 21 GLY A 58 ALA A 59 GLY A 60 ALA A 63 SITE 2 AC5 21 GLU A 64 GLN A 140 HIS A 158 GLY A 249 SITE 3 AC5 21 THR A 250 SER A 251 ASN A 275 THR A 276 SITE 4 AC5 21 GLU A 277 PRO A 292 CYS A 293 EPE A1003 SITE 5 AC5 21 HOH A1033 HOH A1070 HOH A1160 HOH A1176 SITE 6 AC5 21 HOH A1190 SITE 1 AC6 19 GLY B 58 ALA B 59 GLY B 60 GLU B 64 SITE 2 AC6 19 THR B 69 GLN B 140 HIS B 158 GLY B 249 SITE 3 AC6 19 THR B 250 SER B 251 ASN B 275 THR B 276 SITE 4 AC6 19 GLU B 277 CYS B 293 EPE B2003 HOH B2028 SITE 5 AC6 19 HOH B2031 HOH B2160 HOH B2171 SITE 1 AC7 25 HOH B2043 GLY C 58 ALA C 59 GLY C 60 SITE 2 AC7 25 ALA C 63 GLU C 64 THR C 69 PHE C 70 SITE 3 AC7 25 ARG C 71 GLN C 140 HIS C 158 GLY C 249 SITE 4 AC7 25 THR C 250 SER C 251 VAL C 254 ASN C 275 SITE 5 AC7 25 THR C 276 GLU C 277 PRO C 292 CYS C 293 SITE 6 AC7 25 EPE C3003 HOH C3005 HOH C3067 HOH C3082 SITE 7 AC7 25 HOH C3145 SITE 1 AC8 23 GLY D 58 ALA D 59 GLY D 60 GLU D 64 SITE 2 AC8 23 THR D 69 PHE D 70 GLN D 140 HIS D 158 SITE 3 AC8 23 GLY D 249 THR D 250 SER D 251 VAL D 254 SITE 4 AC8 23 ASN D 275 THR D 276 GLU D 277 PRO D 292 SITE 5 AC8 23 CYS D 293 EPE D4003 HOH D4007 HOH D4039 SITE 6 AC8 23 HOH D4072 HOH D4128 HOH D4135 SITE 1 AC9 12 ALA A 82 ALA A 86 TYR A 102 ARG A 105 SITE 2 AC9 12 HIS A 158 VAL A 221 TRP A 222 PHE A 223 SITE 3 AC9 12 GLY A 224 GLU A 225 APR A1002 HOH A1186 SITE 1 BC1 8 ALA B 82 ALA B 86 TYR B 102 ARG B 105 SITE 2 BC1 8 VAL B 221 TRP B 222 PHE B 223 APR B2002 SITE 1 BC2 14 PHE C 70 ALA C 82 ALA C 86 ARG C 105 SITE 2 BC2 14 HIS C 158 VAL C 221 PHE C 223 GLU C 225 SITE 3 BC2 14 LEU C 227 APR C3002 HOH C3144 HOH C3147 SITE 4 BC2 14 SER D 168 CYS D 169 SITE 1 BC3 15 SER C 168 CYS C 169 PHE D 70 ALA D 82 SITE 2 BC3 15 ALA D 86 ARG D 105 HIS D 158 VAL D 221 SITE 3 BC3 15 PHE D 223 GLU D 225 LEU D 227 TYR D 255 SITE 4 BC3 15 APR D4002 HOH D4125 HOH D4149
CRYST1 44.574 58.756 104.965 93.50 92.75 94.98 P 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.022435 0.001955 0.001208 0.00000
SCALE2 0.000000 0.017084 0.001122 0.00000
SCALE3 0.000000 0.000000 0.009559 0.00000