10 20 30 40 50 60 70 80 2ALB - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ISOMERASE 05-AUG-05 2ALB
TITLE NMR STRUCTURE OF THE N-TERMINAL DOMAIN A OF THE TITLE 2 GLYCOPROTEIN CHAPERONE ERP57
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN DISULFIDE-ISOMERASE A3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DISULFIDE ISOMERASE ER-60, ERP60, 58 KDA COMPND 5 MICROSOMAL PROTEIN, P58, ERP57, 58 KDA GLUCOSE REGULATED COMPND 6 PROTEIN; COMPND 7 EC: 5.3.4.1; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMANS
KEYWDS THIOREDOXIN FOLD, ISOMERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR L.SILVENNOINEN,H.TOSSAVAINEN,J.MYLLYHARJU,P.PERMI
REVDAT 2 24-FEB-09 2ALB 1 VERSN REVDAT 1 15-AUG-06 2ALB 0
JRNL AUTH L.SILVENNOINEN,H.TOSSAVAINEN,J.MYLLYHARJU,P.PERMI JRNL TITL NMR STRUCTURE OF THE N-TERMINAL DOMAIN A OF THE JRNL TITL 2 GLYCOPROTEIN CHAPERONE ERP57 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 8.0 REMARK 3 AUTHORS : CASE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2ALB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-05. REMARK 100 THE RCSB ID CODE IS RCSB034029.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 0.8-2.5 MM REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1B, SPARKY 3.110, REMARK 210 CYANA 2.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 4 ARG A 38 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 9 ARG A 38 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 9 ARG A 49 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 10 ARG A 83 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 13 ARG A 49 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 16 ARG A 95 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 18 ARG A 95 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 5 63.77 -106.85 REMARK 500 1 ASN A 10 -12.51 -142.13 REMARK 500 1 ILE A 53 -45.97 -132.99 REMARK 500 1 SER A 74 11.02 52.64 REMARK 500 1 ASP A 84 28.39 48.77 REMARK 500 1 SER A 112 9.66 57.82 REMARK 500 2 ASN A 64 47.80 -146.91 REMARK 500 2 VAL A 73 51.08 -69.29 REMARK 500 2 ASP A 84 28.80 48.32 REMARK 500 3 ASN A 10 -12.89 -143.68 REMARK 500 3 HIS A 35 -14.22 -141.05 REMARK 500 3 ALA A 111 10.21 58.32 REMARK 500 4 GLU A 5 70.93 -119.56 REMARK 500 4 ASP A 17 48.08 -80.11 REMARK 500 4 ASN A 64 49.88 -143.18 REMARK 500 4 SER A 74 9.96 -51.24 REMARK 500 4 ARG A 95 45.63 -81.37 REMARK 500 5 PRO A 31 30.02 -58.34 REMARK 500 5 HIS A 35 -31.93 -135.03 REMARK 500 5 ASN A 64 44.80 -142.60 REMARK 500 5 ASP A 84 25.20 48.29 REMARK 500 5 PRO A 94 -4.20 -53.63 REMARK 500 6 ASP A 84 25.91 49.79 REMARK 500 6 ASP A 92 53.40 -149.65 REMARK 500 7 ASN A 10 -14.51 -142.03 REMARK 500 7 ASP A 17 32.32 -79.94 REMARK 500 7 PHE A 29 -156.38 -153.48 REMARK 500 7 TRP A 32 108.60 -57.44 REMARK 500 7 ASN A 64 45.69 -142.69 REMARK 500 7 ASP A 92 46.31 -145.18 REMARK 500 8 ASN A 10 -14.45 -141.85 REMARK 500 8 ARG A 14 -37.46 -133.80 REMARK 500 8 ASP A 17 39.21 -79.50 REMARK 500 8 ILE A 53 -47.21 -131.84 REMARK 500 8 ASP A 84 25.75 47.40 REMARK 500 8 ALA A 111 24.86 46.79 REMARK 500 8 SER A 112 -15.31 -140.21 REMARK 500 9 GLU A 12 1.31 -67.99 REMARK 500 9 PRO A 31 2.73 -63.39 REMARK 500 9 SER A 74 -18.26 62.58 REMARK 500 9 ASP A 92 41.12 -144.52 REMARK 500 10 ASN A 10 -34.08 -131.18 REMARK 500 10 ILE A 53 -51.47 -129.73 REMARK 500 11 ASN A 10 -12.81 -147.63 REMARK 500 11 GLU A 12 2.29 -66.79 REMARK 500 11 ILE A 53 -40.26 -136.36 REMARK 500 11 ASP A 84 27.62 48.30 REMARK 500 11 ALA A 111 14.65 59.04 REMARK 500 12 GLU A 12 0.42 -63.17 REMARK 500 12 PRO A 31 29.73 -77.17 REMARK 500 12 ASP A 84 28.85 47.49 REMARK 500 13 GLU A 12 7.70 -66.87 REMARK 500 13 GLU A 87 108.90 -56.67 REMARK 500 13 ASP A 92 58.33 34.49 REMARK 500 13 PRO A 94 164.39 -49.55 REMARK 500 14 ASN A 64 56.73 -141.16 REMARK 500 14 ARG A 95 45.86 -73.29 REMARK 500 15 GLU A 5 64.08 -103.29 REMARK 500 15 ASN A 10 -18.42 -141.23 REMARK 500 15 ASP A 84 26.27 48.31 REMARK 500 15 ASP A 92 36.82 -143.51 REMARK 500 15 ALA A 111 13.09 -143.76 REMARK 500 16 GLU A 5 73.46 -112.21 REMARK 500 16 LYS A 37 -34.64 -148.31 REMARK 500 16 ASP A 92 14.27 -142.56 REMARK 500 17 ASN A 10 -12.49 -140.49 REMARK 500 17 GLU A 12 -3.39 -59.88 REMARK 500 17 ASN A 64 52.56 -143.32 REMARK 500 17 VAL A 73 49.38 -79.94 REMARK 500 17 ASP A 92 13.74 -142.56 REMARK 500 17 GLN A 107 -36.47 -132.62 REMARK 500 18 ASP A 84 28.11 43.99 REMARK 500 19 GLU A 12 1.68 -63.73 REMARK 500 19 ASN A 64 57.02 -143.07 REMARK 500 19 ASP A 84 43.69 37.14 REMARK 500 20 GLU A 5 67.77 -102.47 REMARK 500 20 GLU A 12 0.23 -68.20 REMARK 500 20 ASN A 64 46.40 -140.62 REMARK 500 20 ASP A 84 25.86 49.63 REMARK 500 20 ASP A 92 14.31 -142.63 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6308 RELATED DB: BMRB
DBREF 2ALB A 1 113 UNP P30101 PDIA3_HUMAN 25 137
SEQRES 1 A 113 SER ASP VAL LEU GLU LEU THR ASP ASP ASN PHE GLU SER SEQRES 2 A 113 ARG ILE SER ASP THR GLY SER ALA GLY LEU MET LEU VAL SEQRES 3 A 113 GLU PHE PHE ALA PRO TRP CYS GLY HIS CYS LYS ARG LEU SEQRES 4 A 113 ALA PRO GLU TYR GLU ALA ALA ALA THR ARG LEU LYS GLY SEQRES 5 A 113 ILE VAL PRO LEU ALA LYS VAL ASP CYS THR ALA ASN THR SEQRES 6 A 113 ASN THR CYS ASN LYS TYR GLY VAL SER GLY TYR PRO THR SEQRES 7 A 113 LEU LYS ILE PHE ARG ASP GLY GLU GLU ALA GLY ALA TYR SEQRES 8 A 113 ASP GLY PRO ARG THR ALA ASP GLY ILE VAL SER HIS LEU SEQRES 9 A 113 LYS LYS GLN ALA GLY PRO ALA SER VAL
HELIX 1 1 ASN A 10 ILE A 15 1 6 HELIX 2 2 SER A 16 THR A 18 5 3 HELIX 3 3 GLY A 34 LEU A 50 1 17 HELIX 4 4 ASN A 64 TYR A 71 1 8 HELIX 5 5 THR A 96 GLY A 109 1 14
SHEET 1 A 5 LEU A 4 GLU A 5 0 SHEET 2 A 5 LEU A 56 ASP A 60 1 O LYS A 58 N LEU A 4 SHEET 3 A 5 LEU A 23 PHE A 29 1 N GLU A 27 O ALA A 57 SHEET 4 A 5 THR A 78 ARG A 83 -1 O THR A 78 N PHE A 28 SHEET 5 A 5 GLU A 86 GLU A 87 -1 O GLU A 86 N ARG A 83
CISPEP 1 TYR A 76 PRO A 77 1 -4.78 CISPEP 2 TYR A 76 PRO A 77 2 -5.35 CISPEP 3 TYR A 76 PRO A 77 3 3.15 CISPEP 4 TYR A 76 PRO A 77 4 -2.40 CISPEP 5 TYR A 76 PRO A 77 5 -2.70 CISPEP 6 TYR A 76 PRO A 77 6 1.08 CISPEP 7 TYR A 76 PRO A 77 7 3.40 CISPEP 8 TYR A 76 PRO A 77 8 2.15 CISPEP 9 TYR A 76 PRO A 77 9 2.17 CISPEP 10 TYR A 76 PRO A 77 10 1.10 CISPEP 11 TYR A 76 PRO A 77 11 -1.18 CISPEP 12 TYR A 76 PRO A 77 12 -10.19 CISPEP 13 TYR A 76 PRO A 77 13 1.81 CISPEP 14 TYR A 76 PRO A 77 14 2.76 CISPEP 15 TYR A 76 PRO A 77 15 -0.97 CISPEP 16 TYR A 76 PRO A 77 16 5.02 CISPEP 17 TYR A 76 PRO A 77 17 -5.59 CISPEP 18 TYR A 76 PRO A 77 18 -4.67 CISPEP 19 TYR A 76 PRO A 77 19 0.09 CISPEP 20 TYR A 76 PRO A 77 20 -5.43
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000