10 20 30 40 50 60 70 80 2AL8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ISOMERASE 05-AUG-05 2AL8
TITLE RAJINI'S MODEL
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TIM, TRIOSE-PHOSPHATE ISOMERASE; COMPND 5 EC: 5.3.1.1
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_COMMON: BLOOD FLUKE
KEYWDS TRIOSE
EXPDTA THEORETICAL MODEL
AUTHOR M.RAJINIRAJA
REVDAT 1 23-AUG-05 2AL8 0
JRNL AUTH M.RAJINIRAJA JRNL TITL MOLECULAR MODELING JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SPDBV 3.7 REMARK 3 AUTHORS : NICOLAS GUEX REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2AL8 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-AUG-2005. REMARK 100 THE RCSB ID CODE IS RCSB034026.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ARG A 253
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 222 C GLU A 223 N -0.107 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 200 CB - CA - C ANGL. DEV. = 11.9 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 159 GLU A 160 -143.84
DBREF 2AL8 A 1 253 UNP P48501 TPIS_SCHMA 1 253
SEQRES 1 A 253 MET SER GLY SER ARG LYS PHE PHE VAL GLY GLY ASN TRP SEQRES 2 A 253 LYS MET ASN GLY SER ARG ASP ASP ASN ASP LYS LEU LEU SEQRES 3 A 253 LYS LEU LEU SER GLU ALA HIS PHE ASP ASP ASN THR GLU SEQRES 4 A 253 VAL LEU ILE ALA PRO PRO SER VAL PHE LEU HIS GLU ILE SEQRES 5 A 253 ARG LYS SER LEU LYS LYS GLU ILE HIS VAL ALA ALA GLN SEQRES 6 A 253 ASN CYS TYR LYS VAL SER LYS GLY ALA PHE THR GLY GLU SEQRES 7 A 253 ILE SER PRO ALA MET ILE ARG ASP ILE GLY CYS ASP TRP SEQRES 8 A 253 VAL ILE LEU GLY HIS SER GLU ARG ARG ASN ILE PHE GLY SEQRES 9 A 253 GLU SER ASP GLU LEU ILE ALA GLU LYS VAL GLN HIS ALA SEQRES 10 A 253 LEU ALA GLU GLY LEU SER VAL ILE ALA CYS ILE GLY GLU SEQRES 11 A 253 THR LEU SER GLU ARG GLU SER ASN LYS THR GLU GLU VAL SEQRES 12 A 253 CYS VAL ARG GLN LEU LYS ALA ILE ALA ASN LYS ILE LYS SEQRES 13 A 253 SER ALA ASP GLU TRP LYS ARG VAL VAL VAL ALA TYR GLU SEQRES 14 A 253 PRO VAL TRP ALA ILE GLY THR GLY LYS VAL ALA THR PRO SEQRES 15 A 253 GLN GLN ALA GLN GLU VAL HIS ASN PHE LEU ARG LYS TRP SEQRES 16 A 253 PHE LYS THR ASN ALA PRO ASN GLY VAL ASP GLU LYS ILE SEQRES 17 A 253 ARG ILE ILE TYR GLY GLY SER VAL THR ALA ALA ASN CYS SEQRES 18 A 253 LYS GLU LEU ALA GLN GLN HIS ASP VAL ASP GLY PHE LEU SEQRES 19 A 253 VAL GLY GLY ALA SER LEU LYS PRO GLU PHE THR GLU ILE SEQRES 20 A 253 CYS LYS ALA ARG GLN ARG
HELIX 1 1 SER A 18 ALA A 32 1 15 HELIX 2 2 PRO A 45 VAL A 47 5 3 HELIX 3 3 PHE A 48 LEU A 56 1 9 HELIX 4 4 SER A 80 ILE A 87 1 8 HELIX 5 5 HIS A 96 ILE A 102 1 7 HELIX 6 6 SER A 106 GLY A 121 1 16 HELIX 7 7 THR A 131 SER A 137 1 7 HELIX 8 8 LYS A 139 ASN A 153 1 15 HELIX 9 9 GLU A 160 LYS A 162 5 3 HELIX 10 10 PRO A 170 ILE A 174 5 5 HELIX 11 11 THR A 181 ALA A 200 1 20 HELIX 12 12 PRO A 201 ILE A 208 1 8 HELIX 13 13 ASN A 220 GLN A 226 1 7 HELIX 14 14 GLY A 236 PRO A 242 5 7 HELIX 15 15 GLU A 243 LYS A 249 1 7
SHEET 1 A 9 PHE A 7 ASN A 12 0 SHEET 2 A 9 THR A 38 ALA A 43 1 O ALA A 43 N GLY A 11 SHEET 3 A 9 HIS A 61 ALA A 64 1 O ALA A 63 N ILE A 42 SHEET 4 A 9 TRP A 91 LEU A 94 1 O ILE A 93 N ALA A 64 SHEET 5 A 9 SER A 123 ILE A 128 1 O ILE A 125 N LEU A 94 SHEET 6 A 9 VAL A 164 TYR A 168 1 O ALA A 167 N ALA A 126 SHEET 7 A 9 ARG A 209 GLY A 213 1 O ILE A 211 N VAL A 166 SHEET 8 A 9 GLY A 232 VAL A 235 1 O GLY A 232 N TYR A 212 SHEET 9 A 9 PHE A 7 ASN A 12 1 N ASN A 12 O VAL A 235
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000