10 20 30 40 50 60 70 80 2AJE - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DNA BINDING PROTEIN 01-AUG-05 2AJE
TITLE SOLUTION STRUCTURE OF THE ARABIDOPSIS THALIANA TELOMERIC TITLE 2 REPEAT-BINDING PROTEIN DNA BINDING DOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TELOMERE REPEAT-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TELOMERIC BINDING DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS TELOMERE, DNA-BINDING, TRP, MYB MOTIF, DNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 15
AUTHOR H.H.HSIAO,S.C.SUE,B.C.CHUNG,Y.H.CHENG,T.H.HUANG
REVDAT 2 24-FEB-09 2AJE 1 VERSN REVDAT 1 04-JUL-06 2AJE 0
JRNL AUTH S.C.SUE,H.H.HSIAO,B.C.CHUNG,Y.H.CHENG,K.L.HSUEH, JRNL AUTH 2 C.M.CHEN,C.H.HO,T.H.HUANG JRNL TITL SOLUTION STRUCTURE OF THE ARABIDOPSIS THALIANA JRNL TITL 2 TELOMERIC REPEAT-BINDING PROTEIN DNA BINDING JRNL TITL 3 DOMAIN: A NEW FOLD WITH AN ADDITIONAL C-TERMINAL JRNL TITL 4 HELIX JRNL REF J.MOL.BIOL. V. 356 72 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16337232 JRNL DOI 10.1016/J.JMB.2005.11.009
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : NILGES, M. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2AJE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-AUG-05. REMARK 100 THE RCSB ID CODE IS RCSB033963.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 50MM PHOSPHATE BUFFER REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2MM PROTEIN IN 50MM PHOSPHATE REMARK 210 BUFFER, 150MM NACL; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.0, XWINNMR 3.5, REMARK 210 AURELIA 3.1.6 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 LEU A 5 REMARK 465 GLU A 6 REMARK 465 ASP A 7 REMARK 465 PRO A 8
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 10 18.72 58.65 REMARK 500 1 THR A 33 -36.06 -143.14 REMARK 500 1 ALA A 43 27.68 177.87 REMARK 500 1 HIS A 49 111.84 63.32 REMARK 500 1 ARG A 50 -69.19 -94.46 REMARK 500 1 ALA A 66 -87.38 -59.19 REMARK 500 1 LYS A 67 22.56 -148.22 REMARK 500 1 SER A 69 72.78 51.02 REMARK 500 1 GLN A 72 15.01 59.75 REMARK 500 1 PRO A 77 -87.21 -72.01 REMARK 500 1 GLN A 99 -34.73 72.66 REMARK 500 1 GLN A 100 19.62 -144.83 REMARK 500 2 THR A 33 -41.23 -145.83 REMARK 500 2 ARG A 35 28.00 44.66 REMARK 500 2 ALA A 43 26.16 177.68 REMARK 500 2 HIS A 49 112.84 63.44 REMARK 500 2 ARG A 50 -65.36 -93.35 REMARK 500 2 ALA A 66 -75.78 -55.33 REMARK 500 2 LYS A 67 26.65 -165.42 REMARK 500 2 ARG A 73 118.37 62.44 REMARK 500 2 ARG A 74 107.40 61.14 REMARK 500 2 GLU A 76 105.48 -163.66 REMARK 500 2 PRO A 77 -86.41 -71.47 REMARK 500 2 MET A 98 15.06 55.26 REMARK 500 2 GLN A 100 100.87 58.76 REMARK 500 2 GLN A 102 83.17 -160.86 REMARK 500 3 ARG A 10 18.44 58.58 REMARK 500 3 ARG A 13 -36.74 -143.17 REMARK 500 3 GLU A 29 -9.90 -57.44 REMARK 500 3 THR A 33 -44.31 -152.33 REMARK 500 3 ARG A 35 25.67 44.97 REMARK 500 3 ALA A 43 29.74 175.47 REMARK 500 3 HIS A 49 105.74 61.17 REMARK 500 3 ALA A 66 -76.56 -53.51 REMARK 500 3 LYS A 67 20.66 -163.40 REMARK 500 3 PRO A 77 -75.05 -71.38 REMARK 500 3 GLN A 99 -43.11 75.11 REMARK 500 3 GLN A 103 88.02 57.28 REMARK 500 4 ARG A 13 -77.97 -84.71 REMARK 500 4 THR A 33 -44.64 -149.79 REMARK 500 4 ARG A 35 17.86 47.51 REMARK 500 4 ALA A 43 25.39 -178.13 REMARK 500 4 ALA A 47 0.37 -66.00 REMARK 500 4 HIS A 49 113.87 63.60 REMARK 500 4 ALA A 66 -75.65 -52.96 REMARK 500 4 LYS A 67 19.08 -160.97 REMARK 500 4 PRO A 77 -87.03 -71.59 REMARK 500 4 GLN A 99 78.68 51.60 REMARK 500 4 GLN A 100 -35.25 -132.56 REMARK 500 5 ARG A 10 27.83 -144.77 REMARK 500 5 ARG A 13 -160.46 -73.88 REMARK 500 5 ARG A 14 -51.54 -145.57 REMARK 500 5 THR A 33 -42.52 -143.87 REMARK 500 5 ARG A 35 27.40 45.36 REMARK 500 5 ALA A 43 25.41 -179.45 REMARK 500 5 HIS A 49 118.75 63.17 REMARK 500 5 ARG A 50 -68.31 -101.97 REMARK 500 5 ALA A 66 -85.04 -51.91 REMARK 500 5 LYS A 67 20.22 -148.70 REMARK 500 5 SER A 69 77.64 48.10 REMARK 500 5 ARG A 73 93.45 57.38 REMARK 500 5 GLU A 76 153.85 64.91 REMARK 500 5 PRO A 77 -76.61 -71.45 REMARK 500 5 MET A 98 76.15 61.29 REMARK 500 5 GLN A 99 9.99 58.99 REMARK 500 5 GLN A 100 -155.49 39.62 REMARK 500 5 GLN A 103 91.06 62.28 REMARK 500 6 THR A 33 -35.30 -154.55 REMARK 500 6 ARG A 35 25.23 45.48 REMARK 500 6 ALA A 43 26.57 176.73 REMARK 500 6 HIS A 49 110.88 63.74 REMARK 500 6 ARG A 50 -66.00 -93.98 REMARK 500 6 ALA A 66 -72.38 -53.54 REMARK 500 6 LYS A 67 19.86 -164.01 REMARK 500 6 SER A 69 75.04 51.62 REMARK 500 6 ARG A 73 103.25 -162.54 REMARK 500 6 ARG A 74 -55.98 -167.20 REMARK 500 6 PRO A 77 -85.94 -71.71 REMARK 500 7 THR A 33 -40.88 -151.97 REMARK 500 7 ARG A 35 25.01 43.26 REMARK 500 7 ALA A 43 24.99 179.93 REMARK 500 7 HIS A 49 109.27 63.34 REMARK 500 7 ARG A 50 -76.61 -73.45 REMARK 500 7 ALA A 66 -88.97 -59.96 REMARK 500 7 LYS A 67 24.47 -152.82 REMARK 500 7 SER A 69 71.51 39.77 REMARK 500 7 GLN A 72 -23.08 71.95 REMARK 500 7 ARG A 73 29.79 -178.78 REMARK 500 7 ARG A 74 93.75 61.46 REMARK 500 7 GLU A 76 -51.61 -167.80 REMARK 500 7 PRO A 77 -98.00 -71.93 REMARK 500 7 GLN A 97 70.00 57.37 REMARK 500 7 GLN A 99 -37.29 74.05 REMARK 500 7 GLN A 100 -76.13 -169.95 REMARK 500 7 LEU A 101 -30.16 176.70 REMARK 500 8 THR A 33 -37.94 -151.22 REMARK 500 8 ARG A 35 28.94 44.39 REMARK 500 8 ALA A 43 27.12 175.43 REMARK 500 8 HIS A 49 95.49 55.34 REMARK 500 8 ARG A 50 -83.21 -71.28 REMARK 500 8 ALA A 66 -75.99 -52.05 REMARK 500 8 LYS A 67 21.16 -161.07 REMARK 500 8 SER A 69 73.52 55.92 REMARK 500 8 GLU A 76 119.62 63.93 REMARK 500 8 PRO A 77 -75.11 -71.25 REMARK 500 8 GLN A 99 77.23 58.44 REMARK 500 8 GLN A 100 -174.82 59.35 REMARK 500 8 GLN A 103 90.94 58.67 REMARK 500 9 ARG A 10 19.40 58.47 REMARK 500 9 ARG A 14 85.40 54.14 REMARK 500 9 THR A 33 -38.32 -141.17 REMARK 500 9 ARG A 35 27.52 40.87 REMARK 500 9 ALA A 43 25.32 -176.73 REMARK 500 9 HIS A 49 94.23 37.81 REMARK 500 9 ALA A 66 -74.02 -50.62 REMARK 500 9 LYS A 67 19.98 -161.68 REMARK 500 9 SER A 69 92.58 53.98 REMARK 500 9 GLN A 72 1.57 -65.15 REMARK 500 9 ARG A 73 -158.17 60.87 REMARK 500 9 ARG A 74 -173.55 61.48 REMARK 500 9 GLU A 76 86.41 -162.87 REMARK 500 9 PRO A 77 -84.67 -71.63 REMARK 500 9 MET A 98 6.84 59.88 REMARK 500 10 ARG A 13 98.40 -69.08 REMARK 500 10 ARG A 14 67.41 -169.92 REMARK 500 10 THR A 33 -34.99 -157.12 REMARK 500 10 ARG A 35 29.80 44.63 REMARK 500 10 ALA A 43 25.91 178.18 REMARK 500 10 HIS A 49 110.69 62.63 REMARK 500 10 ARG A 50 -69.42 -95.90 REMARK 500 10 ALA A 66 -71.94 -50.81 REMARK 500 10 LYS A 67 29.86 -164.67 REMARK 500 10 SER A 69 73.83 50.97 REMARK 500 10 ARG A 74 110.98 63.08 REMARK 500 10 PRO A 77 -86.29 -71.81 REMARK 500 10 MET A 98 71.33 55.61 REMARK 500 10 GLN A 99 -61.88 72.94 REMARK 500 10 GLN A 100 -86.17 60.30 REMARK 500 10 LEU A 101 20.04 -141.64 REMARK 500 10 GLN A 103 8.55 -151.21 REMARK 500 11 ARG A 14 85.91 56.74 REMARK 500 11 THR A 33 -41.25 -136.91 REMARK 500 11 ALA A 43 25.63 179.18 REMARK 500 11 ALA A 47 0.07 -66.05 REMARK 500 11 HIS A 49 117.91 63.20 REMARK 500 11 ARG A 50 -64.76 -91.91 REMARK 500 11 ALA A 66 -85.10 -62.28 REMARK 500 11 LYS A 67 30.64 -162.29 REMARK 500 11 SER A 69 78.09 58.45 REMARK 500 11 GLN A 72 12.84 59.00 REMARK 500 11 ARG A 73 17.06 57.94 REMARK 500 11 PRO A 77 -85.42 -71.54 REMARK 500 11 GLN A 100 60.40 64.75 REMARK 500 11 GLN A 103 18.50 58.05 REMARK 500 12 ARG A 13 116.02 65.36 REMARK 500 12 ARG A 14 -51.45 -152.32 REMARK 500 12 THR A 33 -41.58 -154.91 REMARK 500 12 ARG A 35 26.24 44.61 REMARK 500 12 ALA A 43 28.79 173.96 REMARK 500 12 HIS A 49 105.61 62.07 REMARK 500 12 ARG A 50 -80.91 -78.79 REMARK 500 12 ALA A 66 -82.28 -61.42 REMARK 500 12 LYS A 67 36.00 -162.73 REMARK 500 12 SER A 69 76.08 56.43 REMARK 500 12 GLN A 72 -19.17 69.25 REMARK 500 12 ARG A 73 -78.96 -148.90 REMARK 500 12 ARG A 74 -67.00 -141.11 REMARK 500 12 PRO A 77 -85.20 -71.62 REMARK 500 12 GLN A 102 -76.76 -55.35 REMARK 500 12 GLN A 103 -70.37 -170.22 REMARK 500 13 ARG A 10 17.89 59.01 REMARK 500 13 ILE A 12 -75.07 -99.75 REMARK 500 13 THR A 33 -49.70 -145.38 REMARK 500 13 ARG A 35 24.59 42.56 REMARK 500 13 ALA A 43 29.88 178.31 REMARK 500 13 HIS A 49 90.82 37.00 REMARK 500 13 ALA A 66 -84.16 -57.58 REMARK 500 13 LYS A 67 18.93 -159.96 REMARK 500 13 ARG A 73 -166.76 61.89 REMARK 500 13 PRO A 77 -87.50 -72.56 REMARK 500 13 MET A 98 19.74 53.82 REMARK 500 14 THR A 33 -33.06 -146.36 REMARK 500 14 ARG A 35 27.50 41.18 REMARK 500 14 ALA A 43 27.79 178.13 REMARK 500 14 HIS A 49 105.73 62.97 REMARK 500 14 ALA A 66 -85.52 -51.62 REMARK 500 14 LYS A 67 15.36 -148.96 REMARK 500 14 ARG A 73 118.57 63.02 REMARK 500 14 PRO A 77 -163.65 -78.82 REMARK 500 14 MET A 98 -21.68 71.95 REMARK 500 14 GLN A 99 85.07 -165.98 REMARK 500 14 ASN A 104 77.62 -114.68 REMARK 500 15 ARG A 10 24.74 -170.71 REMARK 500 15 ARG A 14 84.77 57.89 REMARK 500 15 THR A 33 -43.82 -151.32 REMARK 500 15 ARG A 35 21.97 45.00 REMARK 500 15 ALA A 43 24.84 -177.03 REMARK 500 15 HIS A 49 114.22 62.97 REMARK 500 15 ALA A 66 -77.69 -57.94 REMARK 500 15 LYS A 67 23.50 -165.21 REMARK 500 15 ARG A 73 -74.18 -172.65 REMARK 500 15 ARG A 74 -31.88 -166.48 REMARK 500 15 PRO A 77 -86.43 -71.72 REMARK 500 15 MET A 98 40.67 38.87 REMARK 500 15 GLN A 100 -178.84 60.37 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1W0T RELATED DB: PDB REMARK 900 HUMAN TELOMERIC BINDING PROTEIN TRF1 REMARK 900 RELATED ID: 1W0U RELATED DB: PDB REMARK 900 HUMAN TELOMERIC BINDING PROTEIN TRF2 REMARK 900 RELATED ID: 1IGN RELATED DB: PDB REMARK 900 YEAST TELOMERIC BINDING PROTEIN RAP1 REMARK 900 RELATED ID: 1FEX RELATED DB: PDB REMARK 900 MYB MOTIF OF HUMAN RAP1 REMARK 900 RELATED ID: 1BA5 RELATED DB: PDB REMARK 900 HUMAN TELOMERIC BINDING PROTEIN TRF1 REMARK 900 RELATED ID: 1MSF RELATED DB: PDB REMARK 900 DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN
DBREF 2AJE A 9 105 UNP Q9XGN0 Q9XGN0_ARATH 464 560
SEQADV 2AJE GLY A 1 UNP Q9XGN0 EXPRESSION TAG SEQADV 2AJE SER A 2 UNP Q9XGN0 EXPRESSION TAG SEQADV 2AJE HIS A 3 UNP Q9XGN0 EXPRESSION TAG SEQADV 2AJE MET A 4 UNP Q9XGN0 EXPRESSION TAG SEQADV 2AJE LEU A 5 UNP Q9XGN0 EXPRESSION TAG SEQADV 2AJE GLU A 6 UNP Q9XGN0 EXPRESSION TAG SEQADV 2AJE ASP A 7 UNP Q9XGN0 EXPRESSION TAG SEQADV 2AJE PRO A 8 UNP Q9XGN0 EXPRESSION TAG
SEQRES 1 A 105 GLY SER HIS MET LEU GLU ASP PRO GLN ARG ARG ILE ARG SEQRES 2 A 105 ARG PRO PHE SER VAL ALA GLU VAL GLU ALA LEU VAL GLN SEQRES 3 A 105 ALA VAL GLU LYS LEU GLY THR GLY ARG TRP ARG ASP VAL SEQRES 4 A 105 LYS LEU CYS ALA PHE GLU ASP ALA ASP HIS ARG THR TYR SEQRES 5 A 105 VAL ASP LEU LYS ASP LYS TRP LYS THR LEU VAL HIS THR SEQRES 6 A 105 ALA LYS ILE SER PRO GLN GLN ARG ARG GLY GLU PRO VAL SEQRES 7 A 105 PRO GLN GLU LEU LEU ASN ARG VAL LEU ASN ALA HIS GLY SEQRES 8 A 105 TYR TRP THR GLN GLN GLN MET GLN GLN LEU GLN GLN ASN SEQRES 9 A 105 VAL
HELIX 1 1 SER A 17 GLY A 32 1 16 HELIX 2 2 ARG A 35 LEU A 41 1 7 HELIX 3 3 THR A 51 THR A 65 1 15 HELIX 4 4 GLN A 80 GLN A 97 1 18
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000