10 20 30 40 50 60 70 80 2A01 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIPID TRANSPORT 15-JUN-05 2A01
TITLE CRYSTAL STRUCTURE OF LIPID-FREE HUMAN APOLIPOPROTEIN A-I
COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOLIPOPROTEIN A-I; COMPND 3 CHAIN: A, B, C
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 OTHER_DETAILS: BLOOD PLASMA
KEYWDS FOUR-HELIX BUNDLE, LIPID TRANSPORT
EXPDTA X-RAY DIFFRACTION
AUTHOR A.A.AJEES,G.M.ANANTHARAMAIAH,V.K.MISHRA,M.M.HUSSAIN, AUTHOR 2 K.H.M.MURTHY
REVDAT 3 24-FEB-09 2A01 1 VERSN REVDAT 2 28-FEB-06 2A01 1 JRNL REVDAT 1 21-FEB-06 2A01 0
JRNL AUTH A.A.AJEES,G.M.ANANTHARAMAIAH,V.K.MISHRA, JRNL AUTH 2 M.M.HUSSAIN,K.H.M.MURTHY JRNL TITL CRYSTAL STRUCTURE OF HUMAN APOLIPOPROTEIN A-I: JRNL TITL 2 INSIGHTS INTO ITS PROTECTIVE EFFECT AGAINST JRNL TITL 3 CARDIOVASCULAR DISEASES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 2126 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16452169 JRNL DOI 10.1073/PNAS.0506877103
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 91.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 86886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4323 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 875 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5937 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 154 REMARK 3 SOLVENT ATOMS : 537 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MAXIMUM LIKELIHOOD TARGET
REMARK 4 REMARK 4 2A01 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-05. REMARK 100 THE RCSB ID CODE IS RCSB033322.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-03 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0, 2.0 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : SI111 REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86886 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 91.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.06400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.11300 REMARK 200 R SYM FOR SHELL (I) : 0.11300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, CR(III)ACAC3, PH 7.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.06500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.59750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.53250 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS B 45 N LEU B 47 1.36 REMARK 500 O ASP C 1 CD PRO C 3 1.62 REMARK 500 O VAL C 227 O HOH C 782 1.68 REMARK 500 N VAL C 227 O HOH C 701 2.03 REMARK 500 O LEU C 170 CD1 LEU C 174 2.03 REMARK 500 O GLU C 110 CD1 LEU C 114 2.05 REMARK 500 CE3 TRP B 8 CG2 VAL B 11 2.05 REMARK 500 CG GLU B 92 CD2 LEU B 189 2.08 REMARK 500 O SER B 6 N TRP B 8 2.10 REMARK 500 O TRP C 8 CG LYS C 12 2.12 REMARK 500 O LYS B 226 CD1 LEU B 230 2.13 REMARK 500 O ASP C 9 OD2 ASP C 13 2.13 REMARK 500 CD2 LEU C 214 NE2 GLN C 216 2.14 REMARK 500 O THR C 56 CD2 LEU C 60 2.15 REMARK 500 O MET B 86 CE LYS B 88 2.15 REMARK 500 O ASP C 13 CG2 VAL C 17 2.16 REMARK 500 C ASP C 1 CD PRO C 3 2.17 REMARK 500 CG1 VAL C 53 CD ARG C 123 2.17 REMARK 500 O GLY C 26 CG2 VAL C 30 2.17 REMARK 500 CA PRO C 4 SD MET C 86 2.18 REMARK 500 O SER B 36 CD LYS B 40 2.18 REMARK 500 O MET B 86 N LYS B 88 2.18 REMARK 500 CG1 VAL C 53 NE ARG C 123 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CA GLU A 2 O HOH B 690 1556 0.74 REMARK 500 CB ASP A 1 O HOH B 670 1556 1.15 REMARK 500 CB GLU A 2 O HOH B 690 1556 1.27 REMARK 500 CG ASP A 1 O HOH B 737 1556 1.41 REMARK 500 O ASP A 1 NZ LYS B 45 1556 1.49 REMARK 500 CB LYS A 140 CG1 VAL C 227 4655 1.55 REMARK 500 CA PRO B 220 O HOH A 625 3544 1.78 REMARK 500 OD2 ASP A 1 O HOH B 737 1556 1.80 REMARK 500 OD1 ASP A 1 O HOH B 737 1556 1.81 REMARK 500 N GLU A 2 O HOH B 690 1556 1.84 REMARK 500 CG GLU A 2 O HOH B 690 1556 1.94 REMARK 500 N PRO B 220 O HOH A 625 3544 2.06 REMARK 500 O LYS A 140 CG2 VAL C 227 4655 2.09 REMARK 500 C GLU A 2 O HOH B 690 1556 2.11 REMARK 500 CG ASP A 1 O HOH B 670 1556 2.16 REMARK 500 C ASP A 1 NZ LYS B 45 1556 2.16 REMARK 500 OE1 GLN A 84 O HOH B 658 3545 2.18 REMARK 500 O ASP A 1 CE LYS B 45 1556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 29 CB - CG - CD2 ANGL. DEV. = 3.7 DEGREES REMARK 500 GLN B 5 N - CA - C ANGL. DEV. = 16.5 DEGREES REMARK 500 ARG B 10 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 83 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 GLY B 145 N - CA - C ANGL. DEV. = -15.4 DEGREES REMARK 500 ARG B 149 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 160 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 177 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 188 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 215 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 10 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 61 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG C 83 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG C 116 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 123 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG C 131 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG C 149 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG C 151 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG C 171 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG C 177 CD - NE - CZ ANGL. DEV. = 9.1 DEGREES REMARK 500 ARG C 188 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ALA C 194 N - CA - C ANGL. DEV. = 19.7 DEGREES REMARK 500 ALA C 194 C - N - CA ANGL. DEV. = 17.2 DEGREES REMARK 500 ARG C 215 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 98.90 -61.42 REMARK 500 TRP A 8 80.29 8.22 REMARK 500 LYS A 40 84.51 6.51 REMARK 500 GLU A 85 -67.99 -97.76 REMARK 500 GLU A 92 44.81 -105.93 REMARK 500 GLU A 139 -79.64 -72.31 REMARK 500 SER A 142 -67.82 -127.82 REMARK 500 PRO A 143 146.56 -38.94 REMARK 500 LEU A 144 -96.42 -32.64 REMARK 500 GLU A 146 -75.04 -32.78 REMARK 500 GLU A 191 -68.01 -109.09 REMARK 500 TYR A 192 -55.62 -148.96 REMARK 500 HIS A 193 -31.92 -147.14 REMARK 500 ALA A 194 79.96 8.86 REMARK 500 LEU A 218 -13.71 65.02 REMARK 500 GLU B 2 80.48 22.49 REMARK 500 PRO B 3 -101.56 -70.59 REMARK 500 GLN B 5 23.44 42.24 REMARK 500 PRO B 7 27.86 -36.78 REMARK 500 SER B 36 -14.60 44.87 REMARK 500 LEU B 38 87.09 -67.95 REMARK 500 GLN B 41 -90.68 40.99 REMARK 500 LYS B 45 -156.40 -68.39 REMARK 500 LEU B 46 -25.92 9.84 REMARK 500 SER B 87 82.55 -47.28 REMARK 500 GLN B 138 -147.21 -86.58 REMARK 500 GLU B 139 -96.29 -156.42 REMARK 500 LEU B 141 100.87 -34.74 REMARK 500 SER B 142 158.73 -19.85 REMARK 500 PRO B 143 140.17 -14.22 REMARK 500 LEU B 144 94.04 -66.52 REMARK 500 GLU B 146 -103.10 -116.02 REMARK 500 GLN B 172 -70.92 -88.24 REMARK 500 TYR B 192 -72.00 -161.97 REMARK 500 HIS B 193 21.73 -148.05 REMARK 500 ALA B 194 1.75 -52.53 REMARK 500 LEU B 218 -40.51 -153.55 REMARK 500 GLU C 2 47.44 -80.27 REMARK 500 PRO C 3 174.39 -48.65 REMARK 500 PRO C 7 83.29 -57.46 REMARK 500 TRP C 8 55.27 12.10 REMARK 500 LYS C 40 -162.95 -56.60 REMARK 500 GLN C 41 -63.10 -122.34 REMARK 500 LEU C 46 -50.01 -140.85 REMARK 500 GLN C 84 -71.63 -86.44 REMARK 500 SER C 87 108.37 -58.54 REMARK 500 GLU C 92 10.68 -52.08 REMARK 500 GLU C 139 -65.65 -5.42 REMARK 500 LEU C 141 -160.84 -63.25 REMARK 500 SER C 142 -82.41 -136.66 REMARK 500 PRO C 143 126.78 -32.90 REMARK 500 GLU C 146 -100.63 -121.08 REMARK 500 GLU C 147 -63.79 -25.98 REMARK 500 GLU C 191 -63.56 -133.73 REMARK 500 TYR C 192 -60.55 -144.36 REMARK 500 ALA C 194 -7.06 24.40 REMARK 500 ARG C 215 11.03 -46.23 REMARK 500 LEU C 218 -3.68 45.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY B 35 -15.71 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 603 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 607 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH B 612 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH C 615 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH B 627 DISTANCE = 5.80 ANGSTROMS REMARK 525 HOH B 634 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 639 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH C 662 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A 665 DISTANCE = 5.74 ANGSTROMS REMARK 525 HOH A 684 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH B 693 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH C 695 DISTANCE = 5.19 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH A 696 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH A 701 DISTANCE = 5.16 ANGSTROMS REMARK 525 HOH C 706 DISTANCE = 7.21 ANGSTROMS REMARK 525 HOH A 715 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH B 733 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH C 756 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 773 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH B 795 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH C 806 DISTANCE = 5.65 ANGSTROMS REMARK 525 HOH C 813 DISTANCE = 5.23 ANGSTROMS REMARK 525 HOH C 828 DISTANCE = 5.13 ANGSTROMS
REMARK 600 REMARK 600 HETEROGEN REMARK 600 LIGANDS 601-603 ARE ASSOCIATED WITH POLYPEPTIDE CHAIN A, REMARK 600 604-605 WITH CHAIN B AND 606-607 WITH CHAIN C
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AC9 A 601 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AC9 A 602 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AC9 B 603 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AC9 B 604 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AC9 B 605 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AC9 C 606 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AC9 C 607
DBREF 2A01 A 1 243 UNP P02647 APOA1_HUMAN 25 267 DBREF 2A01 B 1 243 UNP P02647 APOA1_HUMAN 25 267 DBREF 2A01 C 1 243 UNP P02647 APOA1_HUMAN 25 267
SEQRES 1 A 243 ASP GLU PRO PRO GLN SER PRO TRP ASP ARG VAL LYS ASP SEQRES 2 A 243 LEU ALA THR VAL TYR VAL ASP VAL LEU LYS ASP SER GLY SEQRES 3 A 243 ARG ASP TYR VAL SER GLN PHE GLU GLY SER ALA LEU GLY SEQRES 4 A 243 LYS GLN LEU ASN LEU LYS LEU LEU ASP ASN TRP ASP SER SEQRES 5 A 243 VAL THR SER THR PHE SER LYS LEU ARG GLU GLN LEU GLY SEQRES 6 A 243 PRO VAL THR GLN GLU PHE TRP ASP ASN LEU GLU LYS GLU SEQRES 7 A 243 THR GLU GLY LEU ARG GLN GLU MET SER LYS ASP LEU GLU SEQRES 8 A 243 GLU VAL LYS ALA LYS VAL GLN PRO TYR LEU ASP ASP PHE SEQRES 9 A 243 GLN LYS LYS TRP GLN GLU GLU MET GLU LEU TYR ARG GLN SEQRES 10 A 243 LYS VAL GLU PRO LEU ARG ALA GLU LEU GLN GLU GLY ALA SEQRES 11 A 243 ARG GLN LYS LEU HIS GLU LEU GLN GLU LYS LEU SER PRO SEQRES 12 A 243 LEU GLY GLU GLU MET ARG ASP ARG ALA ARG ALA HIS VAL SEQRES 13 A 243 ASP ALA LEU ARG THR HIS LEU ALA PRO TYR SER ASP GLU SEQRES 14 A 243 LEU ARG GLN ARG LEU ALA ALA ARG LEU GLU ALA LEU LYS SEQRES 15 A 243 GLU ASN GLY GLY ALA ARG LEU ALA GLU TYR HIS ALA LYS SEQRES 16 A 243 ALA THR GLU HIS LEU SER THR LEU SER GLU LYS ALA LYS SEQRES 17 A 243 PRO ALA LEU GLU ASP LEU ARG GLN GLY LEU LEU PRO VAL SEQRES 18 A 243 LEU GLU SER PHE LYS VAL SER PHE LEU SER ALA LEU GLU SEQRES 19 A 243 GLU TYR THR LYS LYS LEU ASN THR GLN SEQRES 1 B 243 ASP GLU PRO PRO GLN SER PRO TRP ASP ARG VAL LYS ASP SEQRES 2 B 243 LEU ALA THR VAL TYR VAL ASP VAL LEU LYS ASP SER GLY SEQRES 3 B 243 ARG ASP TYR VAL SER GLN PHE GLU GLY SER ALA LEU GLY SEQRES 4 B 243 LYS GLN LEU ASN LEU LYS LEU LEU ASP ASN TRP ASP SER SEQRES 5 B 243 VAL THR SER THR PHE SER LYS LEU ARG GLU GLN LEU GLY SEQRES 6 B 243 PRO VAL THR GLN GLU PHE TRP ASP ASN LEU GLU LYS GLU SEQRES 7 B 243 THR GLU GLY LEU ARG GLN GLU MET SER LYS ASP LEU GLU SEQRES 8 B 243 GLU VAL LYS ALA LYS VAL GLN PRO TYR LEU ASP ASP PHE SEQRES 9 B 243 GLN LYS LYS TRP GLN GLU GLU MET GLU LEU TYR ARG GLN SEQRES 10 B 243 LYS VAL GLU PRO LEU ARG ALA GLU LEU GLN GLU GLY ALA SEQRES 11 B 243 ARG GLN LYS LEU HIS GLU LEU GLN GLU LYS LEU SER PRO SEQRES 12 B 243 LEU GLY GLU GLU MET ARG ASP ARG ALA ARG ALA HIS VAL SEQRES 13 B 243 ASP ALA LEU ARG THR HIS LEU ALA PRO TYR SER ASP GLU SEQRES 14 B 243 LEU ARG GLN ARG LEU ALA ALA ARG LEU GLU ALA LEU LYS SEQRES 15 B 243 GLU ASN GLY GLY ALA ARG LEU ALA GLU TYR HIS ALA LYS SEQRES 16 B 243 ALA THR GLU HIS LEU SER THR LEU SER GLU LYS ALA LYS SEQRES 17 B 243 PRO ALA LEU GLU ASP LEU ARG GLN GLY LEU LEU PRO VAL SEQRES 18 B 243 LEU GLU SER PHE LYS VAL SER PHE LEU SER ALA LEU GLU SEQRES 19 B 243 GLU TYR THR LYS LYS LEU ASN THR GLN SEQRES 1 C 243 ASP GLU PRO PRO GLN SER PRO TRP ASP ARG VAL LYS ASP SEQRES 2 C 243 LEU ALA THR VAL TYR VAL ASP VAL LEU LYS ASP SER GLY SEQRES 3 C 243 ARG ASP TYR VAL SER GLN PHE GLU GLY SER ALA LEU GLY SEQRES 4 C 243 LYS GLN LEU ASN LEU LYS LEU LEU ASP ASN TRP ASP SER SEQRES 5 C 243 VAL THR SER THR PHE SER LYS LEU ARG GLU GLN LEU GLY SEQRES 6 C 243 PRO VAL THR GLN GLU PHE TRP ASP ASN LEU GLU LYS GLU SEQRES 7 C 243 THR GLU GLY LEU ARG GLN GLU MET SER LYS ASP LEU GLU SEQRES 8 C 243 GLU VAL LYS ALA LYS VAL GLN PRO TYR LEU ASP ASP PHE SEQRES 9 C 243 GLN LYS LYS TRP GLN GLU GLU MET GLU LEU TYR ARG GLN SEQRES 10 C 243 LYS VAL GLU PRO LEU ARG ALA GLU LEU GLN GLU GLY ALA SEQRES 11 C 243 ARG GLN LYS LEU HIS GLU LEU GLN GLU LYS LEU SER PRO SEQRES 12 C 243 LEU GLY GLU GLU MET ARG ASP ARG ALA ARG ALA HIS VAL SEQRES 13 C 243 ASP ALA LEU ARG THR HIS LEU ALA PRO TYR SER ASP GLU SEQRES 14 C 243 LEU ARG GLN ARG LEU ALA ALA ARG LEU GLU ALA LEU LYS SEQRES 15 C 243 GLU ASN GLY GLY ALA ARG LEU ALA GLU TYR HIS ALA LYS SEQRES 16 C 243 ALA THR GLU HIS LEU SER THR LEU SER GLU LYS ALA LYS SEQRES 17 C 243 PRO ALA LEU GLU ASP LEU ARG GLN GLY LEU LEU PRO VAL SEQRES 18 C 243 LEU GLU SER PHE LYS VAL SER PHE LEU SER ALA LEU GLU SEQRES 19 C 243 GLU TYR THR LYS LYS LEU ASN THR GLN
HET AC9 A 601 22 HET AC9 A 602 22 HET AC9 B 603 22 HET AC9 B 604 22 HET AC9 B 605 22 HET AC9 C 606 22 HET AC9 C 607 22
HETNAM AC9 TRISACETYLACETONATOCHROMIUM(III)
FORMUL 4 AC9 7(C15 H21 CR O6) FORMUL 11 HOH *537(H2 O)
HELIX 1 1 ASP A 9 LYS A 40 1 32 HELIX 2 2 ASN A 49 GLU A 85 1 37 HELIX 3 3 LYS A 96 GLN A 117 1 22 HELIX 4 4 LYS A 118 GLN A 138 1 21 HELIX 5 5 GLY A 145 ARG A 188 1 44 HELIX 6 6 LYS A 195 LEU A 214 1 20 HELIX 7 7 LEU A 218 GLN A 243 1 26 HELIX 8 8 TRP B 8 SER B 25 1 18 HELIX 9 9 GLY B 26 GLY B 35 1 10 HELIX 10 10 ASN B 49 ARG B 83 1 35 HELIX 11 11 ASP B 89 GLU B 91 5 3 HELIX 12 12 GLU B 92 GLU B 128 1 37 HELIX 13 13 GLU B 128 HIS B 135 1 8 HELIX 14 14 GLU B 146 LEU B 189 1 44 HELIX 15 15 LYS B 195 LEU B 214 1 20 HELIX 16 16 LEU B 218 GLN B 243 1 26 HELIX 17 17 TRP C 8 LYS C 40 1 33 HELIX 18 18 TRP C 50 GLU C 85 1 36 HELIX 19 19 GLU C 92 LYS C 118 1 27 HELIX 20 20 LYS C 118 LEU C 137 1 20 HELIX 21 21 GLU C 146 HIS C 162 1 17 HELIX 22 22 HIS C 162 LEU C 189 1 28 HELIX 23 23 ALA C 194 ASP C 213 1 20 HELIX 24 24 LEU C 218 GLN C 243 1 26
SITE 1 AC1 9 ASN A 184 ARG A 188 HIS A 193 LYS A 195 SITE 2 AC1 9 GLU A 198 HIS A 199 GLU A 235 HOH A 639 SITE 3 AC1 9 HOH A 682 SITE 1 AC2 5 ARG A 171 GLN A 172 ALA A 176 LYS A 206 SITE 2 AC2 5 HOH A 658 SITE 1 AC3 9 LEU A 218 LEU A 219 LEU A 222 LEU B 218 SITE 2 AC3 9 LEU B 219 LEU B 222 LEU C 218 LEU C 219 SITE 3 AC3 9 LEU C 222 SITE 1 AC4 4 LYS B 195 HIS B 199 TYR B 236 HOH B 718 SITE 1 AC5 2 GLN B 172 ALA B 176 SITE 1 AC6 5 ASN C 184 ARG C 188 LYS C 195 HIS C 199 SITE 2 AC6 5 TYR C 236 SITE 1 AC7 8 GLN C 172 ALA C 176 LYS C 206 HOH C 736 SITE 2 AC7 8 HOH C 747 HOH C 791 HOH C 801 HOH C 837
CRYST1 127.780 127.780 130.130 90.00 90.00 90.00 P 43 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007826 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007826 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007685 0.00000