10 20 30 40 50 60 70 80 1ZV6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 01-JUN-05 1ZV6
TITLE NMR STRUCTURE OF THE HUMAN DEMATIN HEADPIECE S74E MUTANT
COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPB49 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 316-383; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PD48
KEYWDS DEMATIN HEADPIECE, ACTIN BINDING DOMAIN, PHOSPHORYLATION, KEYWDS 2 PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 21
MDLTYP MINIMIZED AVERAGE
AUTHOR Z.G.JIANG,C.J.MCKNIGHT
REVDAT 2 24-FEB-09 1ZV6 1 VERSN REVDAT 1 21-MAR-06 1ZV6 0
JRNL AUTH Z.G.JIANG,C.J.MCKNIGHT JRNL TITL A PHOSPHORYLATION-INDUCED CONFORMATION CHANGE IN JRNL TITL 2 DEMATIN HEADPIECE. JRNL REF STRUCTURE V. 14 379 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 16472756 JRNL DOI 10.1016/J.STR.2005.11.007
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 1449 RESTRAINTS: 1289 ARE NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 142 ARE DIHEDRAL ANGLE RESTRAINTS, AND 18 ARE DISTANCE REMARK 3 RESTRAINTS FROM HYDROGEN BONDS.
REMARK 4 REMARK 4 1ZV6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUN-05. REMARK 100 THE RCSB ID CODE IS RCSB033157.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 10 MM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM DHPS74E U-15N,13C U-15N; REMARK 210 1 MM DHPS74E 10% 13C, U- 15N, REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, HNCA- REMARK 210 J, HNCOCA, 2D NOESY, 3D_15N- REMARK 210 SEPARATED_NOESY, HNHA, HNHB, REMARK 210 2D TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MOLMOL 2K.2, NMRPIPE 2004 REMARK 210 VERSION, XWINNMR 3.1, NMRVIEW REMARK 210 5.0.4. REMARK 210 METHOD USED : DISTANCE GEOMETRY/SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 21 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. MODEL 1 REPRESENTS MINIMIZED AVERAGE STRUCTURE.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 21 -68.84 -92.42 REMARK 500 1 ARG A 26 -72.87 -145.57 REMARK 500 1 LYS A 28 26.67 -73.68 REMARK 500 1 PRO A 30 -176.14 -57.82 REMARK 500 1 ARG A 37 43.03 -142.08 REMARK 500 1 GLU A 39 0.50 -69.55 REMARK 500 1 LEU A 61 -141.94 -79.40 REMARK 500 2 PRO A 15 166.60 -47.95 REMARK 500 2 VAL A 21 -67.42 -102.03 REMARK 500 2 THR A 27 -87.24 -50.70 REMARK 500 2 LYS A 28 23.13 48.34 REMARK 500 2 PRO A 30 -170.62 -54.11 REMARK 500 2 ARG A 37 36.73 -141.03 REMARK 500 2 LEU A 61 -145.89 -79.94 REMARK 500 3 PRO A 15 170.11 -52.00 REMARK 500 3 VAL A 21 -66.67 -100.87 REMARK 500 3 THR A 22 -64.83 -105.07 REMARK 500 3 ARG A 26 -46.64 -149.91 REMARK 500 3 THR A 27 20.62 -163.85 REMARK 500 3 LYS A 28 26.69 -70.41 REMARK 500 3 PRO A 30 -174.36 -60.34 REMARK 500 3 LEU A 61 -145.11 -80.07 REMARK 500 4 PRO A 15 166.94 -46.67 REMARK 500 4 VAL A 21 -67.78 -102.13 REMARK 500 4 ARG A 26 -158.00 -137.57 REMARK 500 4 LYS A 28 25.48 39.55 REMARK 500 4 PRO A 30 -173.00 -56.00 REMARK 500 4 ARG A 37 50.23 -143.33 REMARK 500 4 ALA A 52 -3.02 80.90 REMARK 500 4 LEU A 61 -144.31 -84.84 REMARK 500 5 PRO A 15 170.70 -51.17 REMARK 500 5 VAL A 21 -67.63 -102.41 REMARK 500 5 ARG A 26 -158.53 -138.23 REMARK 500 5 LYS A 28 25.23 39.65 REMARK 500 5 PRO A 30 -171.36 -56.10 REMARK 500 5 ARG A 37 44.43 -145.82 REMARK 500 5 ALA A 52 -3.07 90.32 REMARK 500 5 LEU A 61 -141.60 -80.92 REMARK 500 6 PRO A 15 170.92 -51.06 REMARK 500 6 VAL A 21 -65.91 -102.40 REMARK 500 6 ARG A 26 -53.33 -132.93 REMARK 500 6 THR A 27 -57.17 -150.29 REMARK 500 6 LYS A 28 23.22 41.88 REMARK 500 6 PRO A 30 -173.68 -55.38 REMARK 500 6 ARG A 37 41.91 -147.20 REMARK 500 6 GLU A 39 7.07 -68.31 REMARK 500 6 LEU A 61 -141.51 -80.63 REMARK 500 7 VAL A 21 -67.62 -102.19 REMARK 500 7 THR A 22 -61.76 -105.88 REMARK 500 7 ASN A 23 -33.38 -33.80 REMARK 500 7 ARG A 26 -154.46 -145.30 REMARK 500 7 LYS A 28 24.00 39.95 REMARK 500 7 PRO A 30 -172.95 -57.70 REMARK 500 7 LEU A 61 -146.78 -80.36 REMARK 500 8 PRO A 15 171.08 -48.38 REMARK 500 8 VAL A 21 -67.52 -102.31 REMARK 500 8 ARG A 26 -148.06 -138.53 REMARK 500 8 LYS A 28 19.12 45.42 REMARK 500 8 PRO A 30 -173.30 -57.20 REMARK 500 8 ARG A 37 52.83 -148.49 REMARK 500 8 LEU A 61 -145.89 -80.05 REMARK 500 9 PRO A 15 172.36 -53.99 REMARK 500 9 VAL A 21 -66.43 -94.28 REMARK 500 9 ARG A 26 -67.62 -145.56 REMARK 500 9 PRO A 30 -170.58 -56.04 REMARK 500 9 ARG A 37 53.66 -150.01 REMARK 500 9 LEU A 61 -146.51 -81.28 REMARK 500 10 PRO A 15 171.20 -46.91 REMARK 500 10 VAL A 21 -67.41 -102.19 REMARK 500 10 ARG A 26 -156.80 -129.54 REMARK 500 10 LYS A 28 23.79 42.38 REMARK 500 10 PRO A 30 -172.81 -54.84 REMARK 500 10 ALA A 52 10.62 82.42 REMARK 500 10 LEU A 61 -149.94 -77.06 REMARK 500 11 PRO A 15 169.28 -46.11 REMARK 500 11 THR A 22 -70.88 -106.14 REMARK 500 11 ASN A 23 -58.21 -24.87 REMARK 500 11 ARG A 26 -147.23 -139.47 REMARK 500 11 LYS A 28 39.41 -95.42 REMARK 500 11 PRO A 30 178.69 -45.16 REMARK 500 11 ARG A 37 34.61 -140.92 REMARK 500 11 GLU A 39 6.01 -69.87 REMARK 500 11 LEU A 61 -146.58 -80.04 REMARK 500 12 PRO A 15 170.30 -45.15 REMARK 500 12 VAL A 21 -66.19 -99.07 REMARK 500 12 ARG A 26 -47.87 -153.95 REMARK 500 12 THR A 27 17.70 -151.35 REMARK 500 12 PRO A 30 -170.72 -54.72 REMARK 500 12 ARG A 37 48.76 -149.97 REMARK 500 12 LEU A 61 -145.39 -82.44 REMARK 500 13 PRO A 15 171.45 -48.11 REMARK 500 13 THR A 22 -65.25 -105.38 REMARK 500 13 ARG A 26 -133.00 -139.67 REMARK 500 13 LYS A 28 32.75 -80.64 REMARK 500 13 PRO A 30 174.45 -44.96 REMARK 500 13 PRO A 31 107.42 -57.43 REMARK 500 13 ARG A 37 32.31 -141.34 REMARK 500 13 ALA A 52 1.80 87.79 REMARK 500 13 LEU A 61 -144.61 -81.41 REMARK 500 14 PRO A 15 169.71 -49.30 REMARK 500 14 THR A 22 -69.33 -105.40 REMARK 500 14 ASN A 23 -49.98 -27.83 REMARK 500 14 ARG A 26 -146.10 -140.96 REMARK 500 14 LYS A 28 37.90 -93.33 REMARK 500 14 PRO A 30 171.00 -41.22 REMARK 500 14 PRO A 31 107.50 -57.73 REMARK 500 14 GLU A 39 6.39 -69.58 REMARK 500 14 LEU A 61 -142.70 -79.94 REMARK 500 15 PRO A 15 172.05 -44.50 REMARK 500 15 VAL A 21 -67.63 -99.82 REMARK 500 15 THR A 22 -63.20 -105.94 REMARK 500 15 ARG A 26 -80.55 -144.56 REMARK 500 15 LYS A 28 17.82 -69.65 REMARK 500 15 PRO A 30 -173.51 -58.70 REMARK 500 15 ALA A 52 4.80 86.73 REMARK 500 15 LEU A 61 -144.99 -81.27 REMARK 500 16 PRO A 15 170.29 -46.16 REMARK 500 16 VAL A 21 -65.94 -90.29 REMARK 500 16 THR A 22 -80.20 -105.67 REMARK 500 16 ARG A 26 -91.30 -108.69 REMARK 500 16 PRO A 30 -170.76 -56.61 REMARK 500 16 ARG A 37 67.22 -150.47 REMARK 500 16 LEU A 61 -146.06 -79.70 REMARK 500 17 VAL A 20 165.08 -47.37 REMARK 500 17 VAL A 21 -67.85 -102.17 REMARK 500 17 THR A 22 -74.63 -105.76 REMARK 500 17 ASN A 23 -46.92 -24.70 REMARK 500 17 ARG A 26 -88.24 -136.42 REMARK 500 17 THR A 27 17.91 -143.97 REMARK 500 17 LYS A 28 40.84 -70.67 REMARK 500 17 PRO A 30 -172.02 -54.73 REMARK 500 17 ARG A 37 45.54 -145.17 REMARK 500 17 LEU A 61 -141.31 -81.56 REMARK 500 17 ALA A 62 -167.23 -126.88 REMARK 500 18 PRO A 15 172.15 -53.92 REMARK 500 18 THR A 22 -63.30 -105.55 REMARK 500 18 ASN A 23 -38.24 -33.68 REMARK 500 18 ARG A 26 -84.89 -145.03 REMARK 500 18 PRO A 30 -172.88 -56.99 REMARK 500 18 ARG A 37 46.94 -145.04 REMARK 500 18 LEU A 61 -145.13 -79.65 REMARK 500 19 PRO A 15 170.36 -46.50 REMARK 500 19 THR A 22 -72.61 -105.67 REMARK 500 19 ASN A 23 -57.11 -24.95 REMARK 500 19 ARG A 26 -83.05 -145.85 REMARK 500 19 THR A 27 12.18 -142.16 REMARK 500 19 LYS A 28 32.76 -95.69 REMARK 500 19 PRO A 30 -174.64 -48.13 REMARK 500 19 LEU A 61 -144.99 -79.29 REMARK 500 20 PRO A 15 172.28 -48.43 REMARK 500 20 VAL A 21 -67.15 -102.68 REMARK 500 20 THR A 22 -63.87 -105.58 REMARK 500 20 ASN A 23 -28.12 -38.43 REMARK 500 20 ARG A 26 -52.01 -151.98 REMARK 500 20 THR A 27 -83.04 -135.22 REMARK 500 20 LYS A 28 21.39 42.80 REMARK 500 20 PRO A 30 -170.98 -56.48 REMARK 500 20 ARG A 37 55.16 -150.13 REMARK 500 20 LEU A 61 -149.17 -76.75 REMARK 500 20 LEU A 75 68.75 -150.17 REMARK 500 21 PRO A 15 172.08 -48.09 REMARK 500 21 ARG A 26 -102.08 -140.70 REMARK 500 21 LYS A 28 33.50 -94.58 REMARK 500 21 PRO A 30 149.27 -31.53 REMARK 500 21 PRO A 31 107.70 -41.70 REMARK 500 21 LEU A 61 -147.08 -81.60 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QZP RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE HUMAN DEMATIN HEADPIECE DOMAIN REMARK 900 RELATED ID: 1QQV RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE HEADPIECE DOMAIN OF CHICKEN VILLIN REMARK 900 RELATED ID: 1VII RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE THERMOSTABLE, 35-RESIDUE SUBDOMAIN REMARK 900 FROM CHICKEN VILLIN HEADPIECE
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE DHPS74E CONSTRUCT SPANS RESIDUES 316 TO 383 OF THE 48 REMARK 999 KDA FORM OF HUMAN DEMATIN, WITH SER74 REPLACED BY GLU. REMARK 999 TO FACILITATE THE COMPARISON WITH OTHER HEADPIECE DOMAINS, REMARK 999 WE USE THE NUMBERING SCHEME FROM VARDAR ET AL., 1999, REMARK 999 J.MOLEC.BIOL., 294, 1299-1310, SUCH THAT THE N-TERMINAL REMARK 999 PROLINE OF DHP IS RESIDUE 9, AND C-TERMINAL PHENYLALANINE REMARK 999 IS RESIDUE 76. THE FINAL RESIDUE (F76) IS THE NATURAL REMARK 999 C-TERMINAL RESIDUE OF DEMATIN.
DBREF 1ZV6 A 9 76 GB 31127246 AAH52805 316 383
SEQADV 1ZV6 GLU A 74 GB 31127246 SER 381 ENGINEERED
SEQRES 1 A 68 PRO GLY LEU GLN ILE TYR PRO TYR GLU MET LEU VAL VAL SEQRES 2 A 68 THR ASN LYS GLY ARG THR LYS LEU PRO PRO GLY VAL ASP SEQRES 3 A 68 ARG MET ARG LEU GLU ARG HIS LEU SER ALA GLU ASP PHE SEQRES 4 A 68 SER ARG VAL PHE ALA MET SER PRO GLU GLU PHE GLY LYS SEQRES 5 A 68 LEU ALA LEU TRP LYS ARG ASN GLU LEU LYS LYS LYS ALA SEQRES 6 A 68 GLU LEU PHE
HELIX 1 1 TYR A 16 VAL A 20 5 5 HELIX 2 2 ASP A 34 MET A 36 5 3 HELIX 3 3 ARG A 37 LEU A 42 1 6 HELIX 4 4 SER A 43 PHE A 51 1 9 HELIX 5 5 SER A 54 LEU A 61 1 8 HELIX 6 6 ALA A 62 ALA A 73 1 12
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000