10 20 30 40 50 60 70 80 1ZM1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 10-MAY-05 1ZM1
TITLE CRYSTAL STRUCTURES OF COMPLEX F. SUCCINOGENES 1,3-1,4-BETA- TITLE 2 D-GLUCANASE AND BETA-1,3-1,4-CELLOTRIOSE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCANASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FRAGMENT 4-244; COMPND 5 SYNONYM: ENDO-BETA-1,3-1,4 GLUCANASE, 1,3-1,4-BETA-D-GLUCAN COMPND 6 4-GLUCANOHYDROLASE, MIXED LINKAGE BETA- GLUCANASE, COMPND 7 LICHENASE; COMPND 8 EC: 3.2.1.73; COMPND 9 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FIBROBACTER SUCCINOGENES; SOURCE 3 ORGANISM_TAXID: 833; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: B834 (DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET26B(+)
KEYWDS GLUCANASE/1,3-1,4-BETA-D-GLUCANASE, BETA-1,3-1,4-CELLOTRIOSE KEYWDS 2 (CLTR), ACTIVE CLEFT, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR L.C.TSAI,L.F.SHYUR,Y.S.CHENG,S.H.LEE
REVDAT 3 04-AUG-09 1ZM1 1 HETATM REVDAT 2 24-FEB-09 1ZM1 1 VERSN REVDAT 1 10-MAY-06 1ZM1 0
JRNL AUTH L.C.TSAI,L.F.SHYUR,Y.S.CHENG,S.H.LEE JRNL TITL CRYSTAL STRUCTURE OF TRUNCATED FIBROBACTER JRNL TITL 2 SUCCINOGENES 1,3-1,4-BETA-D-GLUCANASE IN COMPLEX JRNL TITL 3 WITH BETA-1,3-1,4-CELLOTRIOSE JRNL REF J.MOL.BIOL. V. 354 642 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 16246371 JRNL DOI 10.1016/J.JMB.2005.09.041
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 230013.610 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 17829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1940 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.32 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2459 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 40 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3744 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 357 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : -1.30000 REMARK 3 B33 (A**2) : 0.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.34 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.71 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.220 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.880 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.870 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.570 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 58.22 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARBOHYDRATE-LINK.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1ZM1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB032877.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-03 REMARK 200 TEMPERATURE (KELVIN) : 120.0 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20700 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.190 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1MVE REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 80MM BETA-1,3-1,4-CELLOTRIOSE, REMARK 280 0.5MM CALCIUM CHLORIDE, 0.5M SODIUM ACETATE, 25MM TRIS HCL (PH REMARK 280 9.0), 30%(W/V) PEG 4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.0K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.98500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN B 237 REMARK 465 GLY B 238 REMARK 465 GLN B 239 REMARK 465 VAL B 240 REMARK 465 PRO B 241 REMARK 465 ARG B 242 REMARK 465 ASP B 243 REMARK 465 ASP B 244
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 20 162.07 69.11 REMARK 500 ALA A 32 145.06 -176.26 REMARK 500 ALA A 49 48.78 -94.19 REMARK 500 ASN A 72 149.79 -170.79 REMARK 500 THR A 75 -162.66 -115.35 REMARK 500 ALA A 80 60.57 -152.21 REMARK 500 SER A 84 62.81 -154.94 REMARK 500 TRP A 141 -168.75 -163.45 REMARK 500 ASP A 185 -72.89 -98.82 REMARK 500 GLN A 233 37.28 -141.49 REMARK 500 ASP A 243 79.38 -104.64 REMARK 500 TYR B 20 165.69 76.49 REMARK 500 ALA B 49 58.97 -90.35 REMARK 500 ALA B 80 70.09 -169.05 REMARK 500 SER B 84 55.97 -151.69 REMARK 500 ASP B 202 46.95 -146.39 REMARK 500 GLN B 233 65.87 -106.25 REMARK 500 SER B 235 177.48 176.80 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1446 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH B1451 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH B1459 DISTANCE = 8.85 ANGSTROMS REMARK 525 HOH B1479 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH A 481 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH B1498 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH A 499 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A 512 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B1520 DISTANCE = 5.67 ANGSTROMS REMARK 525 HOH B1529 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH B1539 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH B1540 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 542 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B1547 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A 562 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH B1574 DISTANCE = 5.72 ANGSTROMS REMARK 525 HOH A 580 DISTANCE = 5.96 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 400 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 459 O REMARK 620 2 HOH A 458 O 83.8 REMARK 620 3 ASN A 189 O 137.0 97.3 REMARK 620 4 HOH A 520 O 52.9 76.3 85.4 REMARK 620 5 GLY A 222 O 97.6 176.1 79.2 101.7 REMARK 620 6 ASN A 164 O 142.9 88.5 79.9 157.4 92.4 REMARK 620 7 ASN A 164 OD1 64.8 91.7 157.1 117.3 92.2 79.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1400 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 164 OD1 REMARK 620 2 HOH B1426 O 81.9 REMARK 620 3 ASN B 164 O 75.5 154.2 REMARK 620 4 ASN B 189 O 142.9 132.9 67.5 REMARK 620 5 GLY B 222 O 94.4 75.4 93.9 84.8 REMARK 620 6 HOH B1557 O 116.6 49.8 154.3 98.9 106.8 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC A 300 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC A 301 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC A 302 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC B 300 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC B 301 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC B 302 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 400 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1400
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MVE RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH BETA-1,3-1,4-CELLOTRIOSE
DBREF 1ZM1 A 4 244 UNP P17989 GUB_FIBSU 27 267 DBREF 1ZM1 B 4 244 UNP P17989 GUB_FIBSU 27 267
SEQRES 1 A 241 ALA LYS ASP PHE SER GLY ALA GLU LEU TYR THR LEU GLU SEQRES 2 A 241 GLU VAL GLN TYR GLY LYS PHE GLU ALA ARG MSE LYS MSE SEQRES 3 A 241 ALA ALA ALA SER GLY THR VAL SER SER MSE PHE LEU TYR SEQRES 4 A 241 GLN ASN GLY SER GLU ILE ALA ASP GLY ARG PRO TRP VAL SEQRES 5 A 241 GLU VAL ASP ILE GLU VAL LEU GLY LYS ASN PRO GLY SER SEQRES 6 A 241 PHE GLN SER ASN ILE ILE THR GLY LYS ALA GLY ALA GLN SEQRES 7 A 241 LYS THR SER GLU LYS HIS HIS ALA VAL SER PRO ALA ALA SEQRES 8 A 241 ASP GLN ALA PHE HIS THR TYR GLY LEU GLU TRP THR PRO SEQRES 9 A 241 ASN TYR VAL ARG TRP THR VAL ASP GLY GLN GLU VAL ARG SEQRES 10 A 241 LYS THR GLU GLY GLY GLN VAL SER ASN LEU THR GLY THR SEQRES 11 A 241 GLN GLY LEU ARG PHE ASN LEU TRP SER SER GLU SER ALA SEQRES 12 A 241 ALA TRP VAL GLY GLN PHE ASP GLU SER LYS LEU PRO LEU SEQRES 13 A 241 PHE GLN PHE ILE ASN TRP VAL LYS VAL TYR LYS TYR THR SEQRES 14 A 241 PRO GLY GLN GLY GLU GLY GLY SER ASP PHE THR LEU ASP SEQRES 15 A 241 TRP THR ASP ASN PHE ASP THR PHE ASP GLY SER ARG TRP SEQRES 16 A 241 GLY LYS GLY ASP TRP THR PHE ASP GLY ASN ARG VAL ASP SEQRES 17 A 241 LEU THR ASP LYS ASN ILE TYR SER ARG ASP GLY MSE LEU SEQRES 18 A 241 ILE LEU ALA LEU THR ARG LYS GLY GLN GLU SER PHE ASN SEQRES 19 A 241 GLY GLN VAL PRO ARG ASP ASP SEQRES 1 B 241 ALA LYS ASP PHE SER GLY ALA GLU LEU TYR THR LEU GLU SEQRES 2 B 241 GLU VAL GLN TYR GLY LYS PHE GLU ALA ARG MSE LYS MSE SEQRES 3 B 241 ALA ALA ALA SER GLY THR VAL SER SER MSE PHE LEU TYR SEQRES 4 B 241 GLN ASN GLY SER GLU ILE ALA ASP GLY ARG PRO TRP VAL SEQRES 5 B 241 GLU VAL ASP ILE GLU VAL LEU GLY LYS ASN PRO GLY SER SEQRES 6 B 241 PHE GLN SER ASN ILE ILE THR GLY LYS ALA GLY ALA GLN SEQRES 7 B 241 LYS THR SER GLU LYS HIS HIS ALA VAL SER PRO ALA ALA SEQRES 8 B 241 ASP GLN ALA PHE HIS THR TYR GLY LEU GLU TRP THR PRO SEQRES 9 B 241 ASN TYR VAL ARG TRP THR VAL ASP GLY GLN GLU VAL ARG SEQRES 10 B 241 LYS THR GLU GLY GLY GLN VAL SER ASN LEU THR GLY THR SEQRES 11 B 241 GLN GLY LEU ARG PHE ASN LEU TRP SER SER GLU SER ALA SEQRES 12 B 241 ALA TRP VAL GLY GLN PHE ASP GLU SER LYS LEU PRO LEU SEQRES 13 B 241 PHE GLN PHE ILE ASN TRP VAL LYS VAL TYR LYS TYR THR SEQRES 14 B 241 PRO GLY GLN GLY GLU GLY GLY SER ASP PHE THR LEU ASP SEQRES 15 B 241 TRP THR ASP ASN PHE ASP THR PHE ASP GLY SER ARG TRP SEQRES 16 B 241 GLY LYS GLY ASP TRP THR PHE ASP GLY ASN ARG VAL ASP SEQRES 17 B 241 LEU THR ASP LYS ASN ILE TYR SER ARG ASP GLY MSE LEU SEQRES 18 B 241 ILE LEU ALA LEU THR ARG LYS GLY GLN GLU SER PHE ASN SEQRES 19 B 241 GLY GLN VAL PRO ARG ASP ASP
MODRES 1ZM1 MSE A 27 MET SELENOMETHIONINE MODRES 1ZM1 MSE A 29 MET SELENOMETHIONINE MODRES 1ZM1 MSE A 39 MET SELENOMETHIONINE MODRES 1ZM1 MSE A 223 MET SELENOMETHIONINE MODRES 1ZM1 MSE B 27 MET SELENOMETHIONINE MODRES 1ZM1 MSE B 29 MET SELENOMETHIONINE MODRES 1ZM1 MSE B 39 MET SELENOMETHIONINE MODRES 1ZM1 MSE B 223 MET SELENOMETHIONINE
HET MSE A 27 8 HET MSE A 29 8 HET MSE A 39 8 HET MSE A 223 8 HET MSE B 27 8 HET MSE B 29 8 HET MSE B 39 8 HET MSE B 223 8 HET BGC A 300 11 HET BGC A 301 11 HET BGC A 302 12 HET CA A 400 1 HET BGC B 300 11 HET BGC B 301 11 HET BGC B 302 12 HET CA B1400 1
HETNAM MSE SELENOMETHIONINE HETNAM BGC BETA-D-GLUCOSE HETNAM CA CALCIUM ION
FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 BGC 6(C6 H12 O6) FORMUL 4 CA 2(CA 2+) FORMUL 7 HOH *357(H2 O)
HELIX 1 1 GLY A 125 LEU A 130 5 6 HELIX 2 2 SER A 145 GLY A 150 1 6 HELIX 3 3 ASP A 153 LEU A 157 5 5 HELIX 4 4 GLY A 176 SER A 180 5 5 HELIX 5 5 GLY B 125 LEU B 130 5 6 HELIX 6 6 SER B 145 GLY B 150 1 6 HELIX 7 7 ASP B 153 LEU B 157 5 5
SHEET 1 A23 GLN A 117 GLU A 123 0 SHEET 2 A23 TYR A 109 VAL A 114 -1 O VAL A 110 N THR A 122 SHEET 3 A23 HIS A 99 TRP A 105 -1 N GLY A 102 O THR A 113 SHEET 4 A23 GLY A 21 LYS A 28 -1 O GLY A 21 N TRP A 105 SHEET 5 A23 LEU A 159 TYR A 171 -1 O PHE A 162 N LYS A 28 SHEET 6 A23 PHE A 182 ASP A 188 -1 O THR A 183 N LYS A 170 SHEET 7 A23 LEU A 159 TYR A 171 -1 O VAL A 166 N ASP A 188 SHEET 8 A23 MSE A 223 ARG A 230 -1 O LEU A 224 N ILE A 163 SHEET 9 A23 ILE A 217 ARG A 220 -1 O TYR A 218 N ILE A 225 SHEET 10 A23 MSE A 223 ARG A 230 -1 O MSE A 223 N ARG A 220 SHEET 11 A23 PHE A 7 THR A 14 -1 N SER A 8 O THR A 229 SHEET 12 A23 VAL A 210 LEU A 212 1 N ASP A 211 O PHE A 7 SHEET 13 A23 PHE A 7 THR A 14 1 O PHE A 7 N ASP A 211 SHEET 14 A23 TRP A 198 LYS A 200 -1 N GLY A 199 O TYR A 13 SHEET 15 A23 PHE A 7 THR A 14 -1 O TYR A 13 N GLY A 199 SHEET 16 A23 GLY A 135 SER A 142 -1 O LEU A 136 N THR A 14 SHEET 17 A23 THR A 35 TYR A 42 -1 N VAL A 36 O TRP A 141 SHEET 18 A23 GLU A 56 LEU A 62 -1 O VAL A 57 N LEU A 41 SHEET 19 A23 SER A 68 LYS A 77 -1 N GLN A 70 O GLU A 60 SHEET 20 A23 LYS A 86 ALA A 89 -1 O LYS A 86 N SER A 71 SHEET 21 A23 SER A 68 LYS A 77 -1 O PHE A 69 N HIS A 88 SHEET 22 A23 ALA A 80 THR A 83 -1 N ALA A 80 O LYS A 77 SHEET 23 A23 GLU B 17 VAL B 18 1 O GLU B 17 N THR A 83 SHEET 1 B22 ALA B 80 LYS B 82 0 SHEET 2 B22 SER B 68 LYS B 77 -1 N THR B 75 O LYS B 82 SHEET 3 B22 LYS B 86 ALA B 89 -1 O LYS B 86 N SER B 71 SHEET 4 B22 SER B 68 LYS B 77 -1 O PHE B 69 N HIS B 88 SHEET 5 B22 GLU B 56 LEU B 62 -1 O GLU B 56 N ILE B 74 SHEET 6 B22 THR B 35 TYR B 42 -1 O SER B 37 N VAL B 61 SHEET 7 B22 GLY B 135 SER B 142 -1 N GLY B 135 O TYR B 42 SHEET 8 B22 PHE B 7 THR B 14 -1 O ALA B 10 N LEU B 140 SHEET 9 B22 VAL B 210 LEU B 212 1 O ASP B 211 N GLY B 9 SHEET 10 B22 PHE B 7 THR B 14 1 O PHE B 7 N ASP B 211 SHEET 11 B22 TRP B 198 LYS B 200 -1 N GLY B 199 O TYR B 13 SHEET 12 B22 PHE B 7 THR B 14 -1 O TYR B 13 N GLY B 199 SHEET 13 B22 LEU B 224 ARG B 230 -1 O THR B 229 N SER B 8 SHEET 14 B22 ILE B 217 SER B 219 -1 O TYR B 218 N ILE B 225 SHEET 15 B22 LEU B 224 ARG B 230 -1 N ILE B 225 O TYR B 218 SHEET 16 B22 LEU B 159 TYR B 171 -1 O LEU B 159 N LEU B 228 SHEET 17 B22 PHE B 182 ASP B 188 -1 O THR B 183 N LYS B 170 SHEET 18 B22 LEU B 159 TYR B 171 -1 O VAL B 166 N ASP B 188 SHEET 19 B22 GLY B 21 LYS B 28 -1 O LYS B 22 N TYR B 169 SHEET 20 B22 HIS B 99 TRP B 105 -1 N HIS B 99 O MSE B 27 SHEET 21 B22 TYR B 109 VAL B 114 -1 O ARG B 111 N GLU B 104 SHEET 22 B22 GLN B 117 GLU B 123 -1 O GLN B 117 N VAL B 114
LINK C ARG A 26 N MSE A 27 1555 1555 1.32 LINK C MSE A 27 N LYS A 28 1555 1555 1.33 LINK C LYS A 28 N MSE A 29 1555 1555 1.32 LINK C MSE A 29 N ALA A 30 1555 1555 1.33 LINK C SER A 38 N MSE A 39 1555 1555 1.32 LINK C MSE A 39 N PHE A 40 1555 1555 1.32 LINK C GLY A 222 N MSE A 223 1555 1555 1.32 LINK C MSE A 223 N LEU A 224 1555 1555 1.33 LINK CA CA A 400 O HOH A 459 1555 1555 2.73 LINK CA CA A 400 O HOH A 458 1555 1555 2.70 LINK CA CA A 400 O ASN A 189 1555 1555 2.40 LINK CA CA A 400 O HOH A 520 1555 1555 2.78 LINK CA CA A 400 O GLY A 222 1555 1555 2.30 LINK CA CA A 400 O ASN A 164 1555 1555 2.42 LINK CA CA A 400 OD1 ASN A 164 1555 1555 2.45 LINK C ARG B 26 N MSE B 27 1555 1555 1.32 LINK C MSE B 27 N LYS B 28 1555 1555 1.33 LINK C LYS B 28 N MSE B 29 1555 1555 1.33 LINK C MSE B 29 N ALA B 30 1555 1555 1.33 LINK C SER B 38 N MSE B 39 1555 1555 1.33 LINK C MSE B 39 N PHE B 40 1555 1555 1.33 LINK C GLY B 222 N MSE B 223 1555 1555 1.33 LINK C MSE B 223 N LEU B 224 1555 1555 1.33 LINK CA CA B1400 OD1 ASN B 164 1555 1555 2.45 LINK CA CA B1400 O HOH B1426 1555 1555 2.81 LINK CA CA B1400 O ASN B 164 1555 1555 2.59 LINK CA CA B1400 O ASN B 189 1555 1555 2.47 LINK CA CA B1400 O GLY B 222 1555 1555 2.43 LINK CA CA B1400 O HOH B1557 1555 1555 2.83 LINK C1 BGC A 300 O4 BGC A 301 1555 1555 1.39 LINK C1 BGC A 301 O3 BGC A 302 1555 1555 1.39 LINK C1 BGC B 300 O4 BGC B 301 1555 1555 1.38 LINK C1 BGC B 301 O3 BGC B 302 1555 1555 1.39
CISPEP 1 SER A 91 PRO A 92 0 -0.25 CISPEP 2 LEU A 157 PRO A 158 0 -0.09 CISPEP 3 SER B 91 PRO B 92 0 -0.35 CISPEP 4 LEU B 157 PRO B 158 0 -0.07
SITE 1 AC1 8 ASN A 44 ARG A 137 TRP A 203 THR A 204 SITE 2 AC1 8 BGC A 301 HOH A 548 HOH A 550 HOH A 555 SITE 1 AC2 8 GLU A 11 TYR A 42 GLU A 47 TRP A 54 SITE 2 AC2 8 ARG A 137 TRP A 203 BGC A 300 BGC A 302 SITE 1 AC3 12 VAL A 36 SER A 38 PHE A 40 TRP A 54 SITE 2 AC3 12 GLU A 56 GLU A 60 ILE A 74 ASN A 139 SITE 3 AC3 12 TRP A 141 BGC A 301 HOH A 409 HOH A 517 SITE 1 AC4 6 ASN B 44 ARG B 137 TRP B 203 THR B 204 SITE 2 AC4 6 BGC B 301 HOH B1409 SITE 1 AC5 8 GLU B 11 TYR B 42 GLU B 47 TRP B 203 SITE 2 AC5 8 BGC B 300 BGC B 302 HOH B1429 HOH B1497 SITE 1 AC6 12 VAL B 36 SER B 38 PHE B 40 TRP B 54 SITE 2 AC6 12 GLU B 56 ASP B 58 GLU B 60 ILE B 74 SITE 3 AC6 12 ASN B 139 TRP B 141 BGC B 301 HOH B1565 SITE 1 AC7 6 ASN A 164 ASN A 189 GLY A 222 HOH A 458 SITE 2 AC7 6 HOH A 459 HOH A 520 SITE 1 AC8 5 ASN B 164 ASN B 189 GLY B 222 HOH B1426 SITE 2 AC8 5 HOH B1557
CRYST1 70.148 43.970 81.015 90.00 109.56 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014256 0.000000 0.005065 0.00000
SCALE2 0.000000 0.022743 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013099 0.00000