10 20 30 40 50 60 70 80 1Z4H - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING, DNA BINDING PROTEIN 16-MAR-05 1Z4H
TITLE THE RESPONSE REGULATOR TORI BELONGS TO A NEW FAMILY OF TITLE 2 ATYPICAL EXCISIONASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOR INHIBITION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TORI; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETSI
KEYWDS WINGED HELIX, REVERSE TURN, PROTEIN BINDING, DNA BINDING KEYWDS 2 PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 17
AUTHOR L.ELANTAK,M.ANSALDI,F.GUERLESQUIN,V.MEJEAN,X.MORELLI
REVDAT 4 24-FEB-09 1Z4H 1 VERSN REVDAT 3 07-MAR-06 1Z4H 1 JRNL REVDAT 2 30-AUG-05 1Z4H 1 JRNL REVDAT 1 09-AUG-05 1Z4H 0
JRNL AUTH L.ELANTAK,M.ANSALDI,F.GUERLESQUIN,V.MEJEAN, JRNL AUTH 2 X.MORELLI JRNL TITL STRUCTURAL AND GENETIC ANALYSES REVEAL A KEY ROLE JRNL TITL 2 IN PROPHAGE EXCISION FOR THE TORI RESPONSE JRNL TITL 3 REGULATOR INHIBITOR JRNL REF J.BIOL.CHEM. V. 280 36802 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 16079126 JRNL DOI 10.1074/JBC.M507409200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS ARIA 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1341 RESTRAINTS: 1173 DISTANCE REMARK 3 RESTRAINTS + 68 DIHEDRAL ANGLE CONSTRAINTS FROM TALOS + 100 REMARK 3 DIHEDRAL ANGLE CONSTRAINTS FROM CSI AND 3JHNHA.
REMARK 4 REMARK 4 1Z4H COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-05. REMARK 100 THE RCSB ID CODE IS RCSB032286.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 5.9 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5MM TORI U-15N,13C, 50MM REMARK 210 PHOSPHATE BUFFER, 90% H20, 10% REMARK 210 D20; 1.5MM TORI UNLABELLED, REMARK 210 50MM PHOSPHATE BUFFER, 90% REMARK 210 H20, 10% D20; 1.5MM TORI U- REMARK 210 15N, 50MM PHOSPHATE BUFFER, REMARK 210 90% H20, 10% D20; 1.5MM TORI U REMARK 210 -13C, 50MM PHOSPHATE BUFFER, REMARK 210 90% H20, 10% D20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D- REMARK 210 HNCO, 3D-HNCA, CBCA(CO)NH, REMARK 210 HN(CO)CA, HCCH-TOCSY, 2D REMARK 210 NOESY, 2D TOCSY, 3D_13C- REMARK 210 SEPARATED_NOESY, HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.1, FELIX 2002, CNS REMARK 210 ARIA 1.2 REMARK 210 METHOD USED : NON-BONDED INTERACTION FOR REMARK 210 SIMULATED ANNEALING AND REMARK 210 REFINEMENT IN AN EXPLICIT REMARK 210 WATER BOX. REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 17 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: STRUCTURE CALCULATIONS WERE PERFORMED WITH ARIA 1.2 REMARK 210 USING NOE'S, PHI ANGLE DIHEDRAL RESTRAINTS ESTIMATED FROM REMARK 210 3JHNHA AND TALOS-DERIVED DIHEDRAL ANGLE CONSTRAINTS.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 35 31.39 -159.54 REMARK 500 1 LEU A 36 119.21 63.67 REMARK 500 1 ALA A 39 146.21 -38.50 REMARK 500 1 ALA A 46 -91.47 172.20 REMARK 500 1 ALA A 64 73.35 59.68 REMARK 500 2 GLN A 2 -36.22 172.82 REMARK 500 2 ASP A 35 33.40 -159.04 REMARK 500 2 LEU A 36 106.56 61.44 REMARK 500 2 ALA A 39 157.74 -43.28 REMARK 500 2 ALA A 46 -92.57 -167.77 REMARK 500 2 ARG A 63 -96.95 -94.68 REMARK 500 2 ALA A 64 50.57 -169.13 REMARK 500 3 PRO A 7 -39.09 -37.35 REMARK 500 3 ASP A 35 68.49 -166.73 REMARK 500 3 LEU A 36 84.34 33.76 REMARK 500 3 ALA A 39 148.70 -34.54 REMARK 500 3 HIS A 43 114.07 -167.34 REMARK 500 3 ALA A 46 -84.31 -63.48 REMARK 500 3 ARG A 63 78.81 -117.99 REMARK 500 3 ALA A 64 100.01 -55.88 REMARK 500 4 PRO A 7 -48.75 -28.45 REMARK 500 4 ASP A 35 27.25 -163.54 REMARK 500 4 LEU A 36 106.84 60.59 REMARK 500 4 ALA A 39 158.13 -43.32 REMARK 500 4 ILE A 42 -32.77 -133.32 REMARK 500 4 ALA A 46 -94.98 -169.74 REMARK 500 4 ASN A 65 27.78 -149.41 REMARK 500 5 SER A 9 -167.28 -168.06 REMARK 500 5 ASP A 35 35.49 -168.74 REMARK 500 5 LEU A 36 126.91 66.75 REMARK 500 5 ALA A 39 158.20 -48.65 REMARK 500 5 HIS A 43 59.12 -144.92 REMARK 500 5 ALA A 46 -88.21 175.83 REMARK 500 5 ALA A 64 79.79 52.46 REMARK 500 6 GLN A 2 108.63 -166.56 REMARK 500 6 THR A 20 -62.48 -122.18 REMARK 500 6 ASP A 35 26.67 -158.72 REMARK 500 6 LEU A 36 108.36 62.53 REMARK 500 6 ALA A 39 156.73 -41.98 REMARK 500 6 HIS A 43 65.28 -154.81 REMARK 500 6 ALA A 46 -88.67 -179.26 REMARK 500 6 ALA A 64 92.46 -65.40 REMARK 500 7 PRO A 7 -36.43 -38.07 REMARK 500 7 SER A 9 -173.79 -173.37 REMARK 500 7 ASP A 35 86.94 179.43 REMARK 500 7 LEU A 36 100.25 18.39 REMARK 500 7 ALA A 39 153.62 -41.93 REMARK 500 7 HIS A 43 57.28 -140.61 REMARK 500 7 ARG A 45 -68.28 -144.79 REMARK 500 7 ALA A 46 -93.25 60.42 REMARK 500 7 ALA A 64 94.56 60.86 REMARK 500 8 PRO A 7 -36.43 -38.07 REMARK 500 8 SER A 9 -173.79 -173.37 REMARK 500 8 ASP A 35 86.94 179.43 REMARK 500 8 LEU A 36 100.25 18.39 REMARK 500 8 ALA A 39 153.62 -41.93 REMARK 500 8 HIS A 43 57.28 -140.61 REMARK 500 8 ARG A 45 -68.28 -144.79 REMARK 500 8 ALA A 46 -93.25 60.42 REMARK 500 8 ALA A 64 94.56 60.86 REMARK 500 9 ASP A 35 68.87 -157.63 REMARK 500 9 LEU A 36 94.13 28.39 REMARK 500 9 ALA A 39 155.96 -44.27 REMARK 500 9 ALA A 46 -101.75 -169.34 REMARK 500 9 ALA A 64 73.54 47.94 REMARK 500 10 ASP A 35 29.34 -168.72 REMARK 500 10 LEU A 36 115.95 64.51 REMARK 500 10 ALA A 39 153.75 -43.06 REMARK 500 10 ARG A 45 -72.94 -144.87 REMARK 500 10 ALA A 46 -99.29 59.36 REMARK 500 10 ARG A 63 -81.49 -98.26 REMARK 500 10 ALA A 64 29.89 -171.22 REMARK 500 11 ASP A 35 74.90 -160.97 REMARK 500 11 LEU A 36 92.23 27.39 REMARK 500 11 ALA A 39 150.28 -46.59 REMARK 500 11 HIS A 43 38.84 -99.61 REMARK 500 11 ARG A 45 -45.71 -147.83 REMARK 500 11 ALA A 46 -95.26 51.58 REMARK 500 11 ALA A 64 36.00 -98.87 REMARK 500 12 PRO A 7 -50.29 -25.96 REMARK 500 12 ASP A 35 23.35 -160.84 REMARK 500 12 LEU A 36 126.78 66.85 REMARK 500 12 ALA A 39 160.08 -39.20 REMARK 500 12 ARG A 45 -76.85 -139.73 REMARK 500 12 ALA A 46 -103.15 58.37 REMARK 500 12 ASN A 65 72.89 -112.00 REMARK 500 13 PRO A 7 -37.66 -34.63 REMARK 500 13 SER A 9 175.29 177.81 REMARK 500 13 THR A 20 -75.22 -127.27 REMARK 500 13 ASP A 35 70.85 -173.61 REMARK 500 13 LEU A 36 90.66 49.39 REMARK 500 13 ALA A 39 154.29 -45.30 REMARK 500 13 ALA A 46 -96.29 -144.08 REMARK 500 13 ALA A 64 68.31 -69.78 REMARK 500 14 ASP A 35 14.97 -143.77 REMARK 500 14 LEU A 36 84.77 57.15 REMARK 500 14 ALA A 39 156.43 -44.57 REMARK 500 14 LYS A 40 78.66 -101.70 REMARK 500 14 ARG A 45 92.33 70.53 REMARK 500 14 ALA A 46 -81.56 -120.85 REMARK 500 14 ALA A 64 116.03 68.38 REMARK 500 15 PRO A 7 -47.97 -29.92 REMARK 500 15 SER A 9 -179.83 -173.91 REMARK 500 15 THR A 20 -76.67 -107.59 REMARK 500 15 ASP A 35 73.25 -175.39 REMARK 500 15 LEU A 36 91.51 25.58 REMARK 500 15 ALA A 39 152.11 -45.31 REMARK 500 15 ALA A 46 -84.15 -177.45 REMARK 500 16 PRO A 7 -39.25 -38.67 REMARK 500 16 SER A 9 175.28 179.28 REMARK 500 16 THR A 20 -70.87 -127.24 REMARK 500 16 ASP A 35 53.93 -148.33 REMARK 500 16 LEU A 36 88.61 29.88 REMARK 500 16 ALA A 39 160.69 -46.90 REMARK 500 16 ALA A 46 -86.34 -179.80 REMARK 500 17 ASP A 35 78.99 179.32 REMARK 500 17 LEU A 36 92.89 27.53 REMARK 500 17 ALA A 39 163.94 -45.07 REMARK 500 17 HIS A 43 51.03 -152.89 REMARK 500 17 ALA A 46 -93.17 177.26 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1Z4H A 1 66 UNP Q9AZ38 Q9AZ38_BPHK6 1 66
SEQRES 1 A 66 MET GLN HIS GLU LEU GLN PRO ASP SER LEU VAL ASP LEU SEQRES 2 A 66 LYS PHE ILE MET ALA ASP THR GLY PHE GLY LYS THR PHE SEQRES 3 A 66 ILE TYR ASP ARG ILE LYS SER GLY ASP LEU PRO LYS ALA SEQRES 4 A 66 LYS VAL ILE HIS GLY ARG ALA ARG TRP LEU TYR ARG ASP SEQRES 5 A 66 HIS CYS GLU PHE LYS ASN LYS LEU LEU SER ARG ALA ASN SEQRES 6 A 66 GLY
HELIX 1 1 ASP A 12 GLY A 21 1 10 HELIX 2 2 GLY A 23 LEU A 36 1 14 HELIX 3 3 TYR A 50 ALA A 64 1 15
SHEET 1 A 3 LEU A 10 VAL A 11 0 SHEET 2 A 3 ALA A 46 LEU A 49 -1 O TRP A 48 N VAL A 11 SHEET 3 A 3 LYS A 40 VAL A 41 -1 N LYS A 40 O ARG A 47
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000