10 20 30 40 50 60 70 80 1YMZ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER UNKNOWN FUNCTION 22-JAN-05 1YMZ
TITLE CC45, AN ARTIFICIAL WW DOMAIN DESIGNED USING STATISTICAL TITLE 2 COUPLING ANALYSIS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CC45; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: COMPUTATIONAL DESIGN
KEYWDS ARTIFICIAL PROTEIN, COMPUTATIONAL DESIGN, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR M.SOCOLICH,S.W.LOCKLESS,W.P.RUSS,H.LEE,K.H.GARDNER, AUTHOR 2 R.RANGANATHAN
REVDAT 2 24-FEB-09 1YMZ 1 VERSN REVDAT 1 27-SEP-05 1YMZ 0
JRNL AUTH M.SOCOLICH,S.W.LOCKLESS,W.P.RUSS,H.LEE,K.H.GARDNER, JRNL AUTH 2 R.RANGANATHAN JRNL TITL EVOLUTIONARY INFORMATION FOR SPECIFYING A PROTEIN JRNL TITL 2 FOLD. JRNL REF NATURE V. 437 512 2005 JRNL REFN ISSN 0028-0836 JRNL PMID 16177782 JRNL DOI 10.1038/NATURE03991
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1YMZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-05. REMARK 100 THE RCSB ID CODE IS RCSB031700.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : 600UM CC45 PROTEIN, 100MM REMARK 210 SODIUM PHOSPHATE BUFFER, 100MM REMARK 210 NACL, 90% H2O:10% D2O; 1MM REMARK 210 CC45 PROTEIN, 100MM SODIUM REMARK 210 PHOSPHATE BUFFER, 100MM NACL, REMARK 210 99% D2O; 850UM CC45 PROTEIN, U REMARK 210 -15N, 100MM SODIUM PHOSPHATE REMARK 210 BUFFER, 100MM NACL, 90% H2O: REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY, 2D TOCSY, 2D NOESY, REMARK 210 3D_15N-SEPARATED_NOESY, 3D_15N REMARK 210 -SEPARATED_TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, NMRVIEW 5.2.2, REMARK 210 CNS 1.1, ARIA 1.2 REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: STRUCTURE WAS DETERMINED BY A COMBINATION OF 2D REMARK 210 HOMONUCLEAR AND 3D HETERONUCLEAR-EDITED METHODS.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 HIS A -3 REMARK 465 GLY A -2 REMARK 465 ARG A -1 REMARK 465 SER A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 30 45.29 -95.95 REMARK 500 1 ILE A 35 86.78 -67.93 REMARK 500 1 ILE A 36 132.00 74.00 REMARK 500 2 PRO A 33 109.60 -52.03 REMARK 500 2 ILE A 36 96.44 74.65 REMARK 500 3 PRO A 33 103.81 -56.34 REMARK 500 3 ILE A 36 90.48 65.55 REMARK 500 4 TRP A 30 41.46 -96.89 REMARK 500 5 THR A 34 -35.95 -161.20 REMARK 500 6 ASP A 12 -143.46 -81.63 REMARK 500 6 VAL A 13 90.48 -58.24 REMARK 500 6 GLU A 14 -29.29 76.95 REMARK 500 6 TRP A 30 32.56 -94.68 REMARK 500 6 PRO A 33 99.23 -59.19 REMARK 500 8 TRP A 30 52.39 -102.47 REMARK 500 9 ASP A 12 -83.90 -96.03 REMARK 500 9 GLU A 14 79.75 -161.13 REMARK 500 9 PRO A 33 105.11 -43.21 REMARK 500 9 ILE A 35 81.26 68.85 REMARK 500 10 ASP A 12 -79.10 -100.09 REMARK 500 10 PRO A 33 103.23 -30.22 REMARK 500 10 ILE A 36 103.38 69.07 REMARK 500 REMARK 500 REMARK: NULL
REMARK 999 REMARK 999 SEQUENCE SEQUENCE NUMBERING IS BASED ON AN ALIGNMENT OF WW REMARK 999 DOMAINS PRESENTED IN FIGURE 1 OF PRIMARY REFERENCE, LEADING TO A REMARK 999 GAP IN NUMBERING BETWEEN GLU 14 AND GLY 16
DBREF 1YMZ A -5 38 PDB 1YMZ 1YMZ -5 38
SEQRES 1 A 43 GLY SER HIS GLY ARG SER MET PRO LEU PRO PRO GLY TRP SEQRES 2 A 43 GLU ARG ARG THR ASP VAL GLU GLY LYS VAL TYR TYR PHE SEQRES 3 A 43 ASN VAL ARG THR LEU THR THR THR TRP GLU ARG PRO THR SEQRES 4 A 43 ILE ILE LEU GLU
SHEET 1 A 3 TRP A 7 THR A 11 0 SHEET 2 A 3 VAL A 18 ASN A 22 -1 O PHE A 21 N GLU A 8 SHEET 3 A 3 THR A 27 THR A 29 -1 O THR A 29 N TYR A 20
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000