10 20 30 40 50 60 70 80 1YK9 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LYASE 17-JAN-05 1YK9
TITLE CRYSTAL STRUCTURE OF A MUTANT FORM OF THE MYCOBACTERIAL TITLE 2 ADENYLYL CYCLASE RV1625C
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE CYCLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RV1625C CATALYTIC DOMAIN; COMPND 5 SYNONYM: ATP PYROPHOSPHATE-LYASE, ADENYLYL CYCLASE; COMPND 6 EC: 4.6.1.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: RV1625C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSET
KEYWDS BETA-ALPHA-BETA SANDWICH, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, TB STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 TBSGC, LYASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.D.KETKAR,A.R.SHENOY,U.A.RAMAGOPAL,S.S.VISWESWARIAH, AUTHOR 2 K.SUGUNA,TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC)
REVDAT 3 20-MAY-08 1YK9 1 REMARK VERSN REVDAT 2 14-FEB-06 1YK9 1 JRNL REVDAT 1 24-JAN-06 1YK9 0
JRNL AUTH A.D.KETKAR,A.R.SHENOY,U.A.RAMAGOPAL, JRNL AUTH 2 S.S.VISWESWARIAH,K.SUGUNA JRNL TITL A STRUCTURAL BASIS FOR THE ROLE OF NUCLEOTIDE JRNL TITL 2 SPECIFYING RESIDUES IN REGULATING THE JRNL TITL 3 OLIGOMERIZATION OF THE RV1625C ADENYLYL CYCLASE JRNL TITL 4 FROM M.TUBERCULOSIS JRNL REF J.MOL.BIOL. V. 356 904 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16403515 JRNL DOI 10.1016/J.JMB.2005.12.017
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2007090.860 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 6079 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.600 REMARK 3 FREE R VALUE TEST SET COUNT : 582 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 912 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 98 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.039 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1410 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 71 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.30000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : 0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.30 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.41 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.90 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.16 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.800 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 7.440 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 8.070 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 9.780 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 1.17 REMARK 3 BSOL : 300.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1YK9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JAN-05. REMARK 100 THE RCSB ID CODE IS RCSB031610.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSING SI(111) REMARK 200 CRYSTALS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6355 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 19.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, TRIS-HCL, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.86950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 10.93475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.80425 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 240 REMARK 465 ASN A 241 REMARK 465 ILE A 242 REMARK 465 ILE A 243 REMARK 465 ALA A 244 REMARK 465 ASP A 429 REMARK 465 PRO A 430 REMARK 465 GLY A 431 REMARK 465 GLU A 432 REMARK 465 VAL A 433 REMARK 465 ARG A 434 REMARK 465 GLY A 435 REMARK 465 ALA A 436 REMARK 465 GLU A 437 REMARK 465 PRO A 438 REMARK 465 ARG A 439 REMARK 465 THR A 440 REMARK 465 ALA A 441 REMARK 465 GLY A 442 REMARK 465 VAL A 443
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 310 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 361 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 424 CG CD NE CZ NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 411 CD - CE - NZ ANGL. DEV. = 16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 247 -73.36 -110.78 REMARK 500 ASP A 248 -123.88 30.42 REMARK 500 PHE A 260 79.92 -110.09 REMARK 500 GLU A 262 -20.43 -152.59 REMARK 500 ARG A 263 -81.94 -62.37 REMARK 500 ALA A 264 13.57 -149.89 REMARK 500 THR A 267 107.96 81.34 REMARK 500 ASP A 271 -56.53 71.46 REMARK 500 VAL A 273 37.04 32.60 REMARK 500 ARG A 274 -29.89 -141.23 REMARK 500 ASP A 288 91.52 -56.98 REMARK 500 GLN A 289 -48.43 -154.56 REMARK 500 HIS A 290 -159.97 -143.25 REMARK 500 ILE A 295 -88.09 -112.71 REMARK 500 VAL A 297 113.46 -163.36 REMARK 500 ASP A 314 53.11 -91.49 REMARK 500 ALA A 331 -23.06 -143.33 REMARK 500 LYS A 334 -40.96 -132.56 REMARK 500 ARG A 337 106.50 56.59 REMARK 500 PRO A 342 38.28 -93.75 REMARK 500 VAL A 356 90.23 46.67 REMARK 500 SER A 359 -171.64 48.28 REMARK 500 ARG A 360 -39.05 63.28 REMARK 500 CYS A 365 -177.80 56.32 REMARK 500 THR A 380 76.87 -107.38 REMARK 500 VAL A 383 -74.27 23.18 REMARK 500 ARG A 405 -71.03 -107.65 REMARK 500 ILE A 408 -135.65 -127.00 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 4 DISTANCE = 7.70 ANGSTROMS REMARK 525 HOH A 5 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH A 6 DISTANCE = 8.13 ANGSTROMS REMARK 525 HOH A 7 DISTANCE = 9.58 ANGSTROMS REMARK 525 HOH A 8 DISTANCE = 13.58 ANGSTROMS REMARK 525 HOH A 9 DISTANCE = 16.61 ANGSTROMS REMARK 525 HOH A 11 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH A 12 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH A 13 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A 14 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A 15 DISTANCE = 12.62 ANGSTROMS REMARK 525 HOH A 16 DISTANCE = 11.93 ANGSTROMS REMARK 525 HOH A 23 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH A 26 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH A 30 DISTANCE = 8.36 ANGSTROMS REMARK 525 HOH A 31 DISTANCE = 9.62 ANGSTROMS REMARK 525 HOH A 32 DISTANCE = 8.40 ANGSTROMS REMARK 525 HOH A 33 DISTANCE = 12.72 ANGSTROMS REMARK 525 HOH A 34 DISTANCE = 9.16 ANGSTROMS REMARK 525 HOH A 35 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A 36 DISTANCE = 13.87 ANGSTROMS REMARK 525 HOH A 40 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A 43 DISTANCE = 5.55 ANGSTROMS REMARK 525 HOH A 44 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH A 45 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 46 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 50 DISTANCE = 8.05 ANGSTROMS REMARK 525 HOH A 51 DISTANCE = 7.97 ANGSTROMS REMARK 525 HOH A 52 DISTANCE = 8.77 ANGSTROMS REMARK 525 HOH A 53 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH A 54 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 56 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A 57 DISTANCE = 14.75 ANGSTROMS REMARK 525 HOH A 58 DISTANCE = 13.40 ANGSTROMS REMARK 525 HOH A 59 DISTANCE = 7.24 ANGSTROMS REMARK 525 HOH A 60 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH A 61 DISTANCE = 10.66 ANGSTROMS REMARK 525 HOH A 62 DISTANCE = 16.20 ANGSTROMS REMARK 525 HOH A 64 DISTANCE = 5.17 ANGSTROMS REMARK 525 HOH A 66 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A 68 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH A 69 DISTANCE = 13.27 ANGSTROMS
DBREF 1YK9 A 240 443 UNP O30820 CYA1_MYCTU 240 443
SEQADV 1YK9 GLU A 296 UNP O30820 LYS 296 ENGINEERED SEQADV 1YK9 ARG A 363 UNP O30820 PHE 363 ENGINEERED SEQADV 1YK9 CYS A 365 UNP O30820 ASP 365 ENGINEERED
SEQRES 1 A 204 ARG ASN ILE ILE ALA ASP LYS TYR ASP GLU ALA SER VAL SEQRES 2 A 204 LEU PHE ALA ASP ILE VAL GLY PHE THR GLU ARG ALA SER SEQRES 3 A 204 SER THR ALA PRO ALA ASP LEU VAL ARG PHE LEU ASP ARG SEQRES 4 A 204 LEU TYR SER ALA PHE ASP GLU LEU VAL ASP GLN HIS GLY SEQRES 5 A 204 LEU GLU LYS ILE GLU VAL SER GLY ASP SER TYR MET VAL SEQRES 6 A 204 VAL SER GLY VAL PRO ARG PRO ARG PRO ASP HIS THR GLN SEQRES 7 A 204 ALA LEU ALA ASP PHE ALA LEU ASP MET THR ASN VAL ALA SEQRES 8 A 204 ALA GLN LEU LYS ASP PRO ARG GLY ASN PRO VAL PRO LEU SEQRES 9 A 204 ARG VAL GLY LEU ALA THR GLY PRO VAL VAL ALA GLY VAL SEQRES 10 A 204 VAL GLY SER ARG ARG PHE ARG TYR CYS VAL TRP GLY ASP SEQRES 11 A 204 ALA VAL ASN VAL ALA SER ARG MET GLU SER THR ASP SER SEQRES 12 A 204 VAL GLY GLN ILE GLN VAL PRO ASP GLU VAL TYR GLU ARG SEQRES 13 A 204 LEU LYS ASP ASP PHE VAL LEU ARG GLU ARG GLY HIS ILE SEQRES 14 A 204 ASN VAL LYS GLY LYS GLY VAL MET ARG THR TRP TYR LEU SEQRES 15 A 204 ILE GLY ARG LYS VAL ALA ALA ASP PRO GLY GLU VAL ARG SEQRES 16 A 204 GLY ALA GLU PRO ARG THR ALA GLY VAL
FORMUL 2 HOH *71(H2 O)
HELIX 1 1 ARG A 274 SER A 281 1 8 HELIX 2 2 ASP A 284 ASP A 288 5 5 HELIX 3 3 ASP A 314 ASP A 321 1 8 HELIX 4 4 ASP A 321 ALA A 330 1 10 HELIX 5 5 ASP A 369 ALA A 374 1 6 HELIX 6 6 SER A 375 THR A 380 1 6 HELIX 7 7 PRO A 389 ARG A 395 1 7
SHEET 1 A 5 GLU A 293 LYS A 294 0 SHEET 2 A 5 TYR A 302 VAL A 305 -1 O VAL A 305 N GLU A 293 SHEET 3 A 5 ALA A 250 ILE A 257 -1 N LEU A 253 O VAL A 304 SHEET 4 A 5 LEU A 343 GLY A 350 -1 O ALA A 348 N VAL A 252 SHEET 5 A 5 ILE A 386 GLN A 387 1 O GLN A 387 N VAL A 345 SHEET 1 B 2 VAL A 352 ALA A 354 0 SHEET 2 B 2 VAL A 366 GLY A 368 -1 O TRP A 367 N VAL A 353 SHEET 1 C 2 PHE A 400 GLU A 404 0 SHEET 2 C 2 TYR A 420 LYS A 425 -1 O GLY A 423 N VAL A 401
CISPEP 1 ASP A 335 PRO A 336 0 0.65
CRYST1 71.020 71.020 43.739 90.00 90.00 90.00 P 41 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014081 0.000000 0.000000 0.00000
SCALE2 0.000000 0.014081 0.000000 0.00000
SCALE3 0.000000 0.000000 0.022863 0.00000