10 20 30 40 50 60 70 80 1YIC - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ELECTRON TRANSPORT 18-FEB-97 1YIC
TITLE THE OXIDIZED SACCHAROMYCES CEREVISIAE ISO-1-CYTOCHROME C, TITLE 2 NMR, 20 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C, ISO-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FERRICYTOCHROME C; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: OXIDIZED FORM
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 8 EXPRESSION_SYSTEM_GENE: YEAST ISO-1-CYTOCHROME C
KEYWDS ELECTRON TRANSPORT, CYTOCHROME, FERRICYTOCHROME
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR L.BANCI,I.BERTINI,K.L.BREN,H.B.GRAY,P.SOMPORNPISUT,P.TURANO
REVDAT 2 24-FEB-09 1YIC 1 VERSN REVDAT 1 23-JUL-97 1YIC 0
JRNL AUTH L.BANCI,I.BERTINI,K.L.BREN,H.B.GRAY,P.SOMPORNPISUT, JRNL AUTH 2 P.TURANO JRNL TITL SOLUTION STRUCTURE OF OXIDIZED SACCHAROMYCES JRNL TITL 2 CEREVISIAE ISO-1-CYTOCHROME C. JRNL REF BIOCHEMISTRY V. 36 8992 1997 JRNL REFN ISSN 0006-2960 JRNL PMID 9220987 JRNL DOI 10.1021/BI963025C
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.V.LOUIE,G.D.BRAYER REMARK 1 TITL HIGH-RESOLUTION REFINEMENT OF YEAST REMARK 1 TITL 2 ISO-1-CYTOCHROME C AND COMPARISONS WITH OTHER REMARK 1 TITL 3 EUKARYOTIC CYTOCHROMES C REMARK 1 REF J.MOL.BIOL. V. 214 527 1990 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.GAO,J.BOYD,R.J.WILLIAMS,G.J.PIELAK REMARK 1 TITL ASSIGNMENT OF PROTON RESONANCES, IDENTIFICATION OF REMARK 1 TITL 2 SECONDARY STRUCTURAL ELEMENTS, AND ANALYSIS OF REMARK 1 TITL 3 BACKBONE CHEMICAL SHIFTS FOR THE C102T VARIANT OF REMARK 1 TITL 4 YEAST ISO-1-CYTOCHROME C AND HORSE CYTOCHROME C REMARK 1 REF BIOCHEMISTRY V. 29 6994 1990 REMARK 1 REFN ISSN 0006-2960
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1YIC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 TYR A 46 CB - CG - CD1 ANGL. DEV. = -4.7 DEGREES REMARK 500 3 CYS A 14 CA - CB - SG ANGL. DEV. = 9.1 DEGREES REMARK 500 6 CYS A 14 CA - CB - SG ANGL. DEV. = 8.7 DEGREES REMARK 500 6 ASP A 90 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 7 CYS A 14 CA - CB - SG ANGL. DEV. = 9.3 DEGREES REMARK 500 8 CYS A 14 CA - CB - SG ANGL. DEV. = 8.3 DEGREES REMARK 500 9 CYS A 14 CA - CB - SG ANGL. DEV. = 8.3 DEGREES REMARK 500 9 TYR A 48 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 10 CYS A 14 CA - CB - SG ANGL. DEV. = 7.7 DEGREES REMARK 500 11 CYS A 14 CA - CB - SG ANGL. DEV. = 7.4 DEGREES REMARK 500 13 CYS A 14 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 14 SER A 2 CB - CA - C ANGL. DEV. = 14.4 DEGREES REMARK 500 15 TYR A 48 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 16 TYR A 46 CG - CD1 - CE1 ANGL. DEV. = -5.2 DEGREES REMARK 500 16 PHE A 82 CB - CG - CD2 ANGL. DEV. = -5.3 DEGREES REMARK 500 16 PHE A 82 CB - CG - CD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 18 CYS A 14 CA - CB - SG ANGL. DEV. = 8.4 DEGREES REMARK 500 18 PHE A 82 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 18 PHE A 82 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 18 ARG A 91 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 20 THR A -5 CB - CA - C ANGL. DEV. = 17.6 DEGREES REMARK 500 20 THR A -5 N - CA - C ANGL. DEV. = -21.4 DEGREES REMARK 500 20 CYS A 14 CA - CB - SG ANGL. DEV. = 8.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A -3 -70.80 -69.35 REMARK 500 1 LYS A -2 143.22 60.58 REMARK 500 1 ALA A -1 -92.17 -66.12 REMARK 500 1 ALA A 3 -78.24 -41.29 REMARK 500 1 LYS A 4 -95.85 30.49 REMARK 500 1 ARG A 13 -67.97 -121.89 REMARK 500 1 PRO A 25 -166.12 -73.77 REMARK 500 1 LYS A 27 -93.91 -4.04 REMARK 500 1 HIS A 33 101.22 -58.93 REMARK 500 1 PHE A 36 99.48 -49.03 REMARK 500 1 GLN A 42 -71.27 -116.88 REMARK 500 1 ALA A 43 -139.88 23.95 REMARK 500 1 GLU A 44 9.28 -152.40 REMARK 500 1 SER A 47 -15.37 73.77 REMARK 500 1 TYR A 48 -172.34 61.83 REMARK 500 1 ASN A 70 84.53 -165.52 REMARK 500 1 PRO A 76 87.34 -68.11 REMARK 500 1 MET A 80 83.44 -54.83 REMARK 500 1 ALA A 81 46.24 -79.05 REMARK 500 1 LYS A 87 -122.51 -116.51 REMARK 500 1 GLU A 88 -49.56 -172.66 REMARK 500 1 SER A 102 97.24 -164.98 REMARK 500 2 GLU A -4 -74.51 61.57 REMARK 500 2 PHE A -3 -155.41 -143.88 REMARK 500 2 ALA A -1 104.11 62.05 REMARK 500 2 LYS A 5 -49.92 68.99 REMARK 500 2 ARG A 13 -67.27 -129.87 REMARK 500 2 CYS A 17 -72.26 -97.79 REMARK 500 2 HIS A 18 -174.81 -68.62 REMARK 500 2 THR A 19 -43.82 -147.06 REMARK 500 2 LYS A 22 98.15 86.25 REMARK 500 2 PRO A 25 12.56 -69.87 REMARK 500 2 HIS A 26 -78.10 70.41 REMARK 500 2 LYS A 27 121.09 50.69 REMARK 500 2 VAL A 28 -75.64 41.88 REMARK 500 2 LEU A 32 49.86 -82.64 REMARK 500 2 HIS A 33 97.16 -58.74 REMARK 500 2 PHE A 36 96.43 -57.92 REMARK 500 2 ALA A 43 -151.08 31.95 REMARK 500 2 GLU A 44 -41.77 -137.73 REMARK 500 2 ASP A 50 -50.76 73.22 REMARK 500 2 ASN A 56 83.41 -59.40 REMARK 500 2 ASP A 60 -83.57 -150.68 REMARK 500 2 GLU A 61 -50.91 -157.20 REMARK 500 2 ASN A 70 78.00 -169.61 REMARK 500 2 PRO A 76 88.60 -68.62 REMARK 500 2 MET A 80 90.62 -64.75 REMARK 500 2 PHE A 82 -93.41 -75.54 REMARK 500 2 LEU A 85 -72.84 -103.68 REMARK 500 2 LYS A 86 -57.65 72.85 REMARK 500 2 LYS A 87 -30.06 -30.82 REMARK 500 2 GLU A 88 -47.99 81.92 REMARK 500 3 GLU A -4 -93.53 9.11 REMARK 500 3 SER A 2 84.41 -163.90 REMARK 500 3 ALA A 3 -80.25 -24.41 REMARK 500 3 LYS A 4 36.50 30.62 REMARK 500 3 LYS A 5 -44.49 160.20 REMARK 500 3 CYS A 14 -60.17 179.06 REMARK 500 3 LYS A 27 -106.82 -75.71 REMARK 500 3 HIS A 33 82.39 37.53 REMARK 500 3 GLU A 44 27.38 -75.08 REMARK 500 3 TYR A 46 142.35 75.55 REMARK 500 3 TYR A 48 179.07 61.26 REMARK 500 3 ASP A 50 -44.61 74.61 REMARK 500 3 ASP A 60 -87.98 -127.72 REMARK 500 3 GLU A 61 -50.06 -162.76 REMARK 500 3 ASN A 70 75.91 -170.53 REMARK 500 3 THR A 78 35.68 -79.59 REMARK 500 3 LYS A 79 51.43 -20.90 REMARK 500 3 ALA A 81 36.81 -80.01 REMARK 500 4 PHE A -3 105.01 -48.55 REMARK 500 4 ALA A -1 109.68 68.92 REMARK 500 4 SER A 2 67.95 -163.56 REMARK 500 4 ALA A 3 -79.11 54.97 REMARK 500 4 LYS A 4 -93.90 46.00 REMARK 500 4 ARG A 13 -50.46 -122.73 REMARK 500 4 THR A 19 -39.24 -149.41 REMARK 500 4 GLU A 21 -106.11 -83.96 REMARK 500 4 LYS A 22 61.63 -163.01 REMARK 500 4 HIS A 26 16.50 58.19 REMARK 500 4 LYS A 27 -80.66 -15.49 REMARK 500 4 LEU A 32 39.23 -82.49 REMARK 500 4 SER A 40 91.52 -61.68 REMARK 500 4 ALA A 43 -155.19 38.05 REMARK 500 4 TYR A 48 176.77 61.52 REMARK 500 4 GLU A 61 -51.12 173.57 REMARK 500 4 ASN A 70 85.13 -164.36 REMARK 500 4 PRO A 76 90.06 -68.57 REMARK 500 4 LYS A 79 38.85 -95.23 REMARK 500 4 MET A 80 79.25 -67.84 REMARK 500 4 ALA A 81 41.27 -78.30 REMARK 500 4 PHE A 82 -91.33 -83.30 REMARK 500 4 LYS A 87 101.63 -58.61 REMARK 500 4 ASN A 92 38.79 -73.86 REMARK 500 4 ASP A 93 -52.47 -151.67 REMARK 500 5 SER A 2 172.75 41.83 REMARK 500 5 ALA A 3 -39.22 -174.25 REMARK 500 5 CYS A 14 -54.00 -139.42 REMARK 500 5 LEU A 15 -9.64 -57.09 REMARK 500 5 HIS A 18 -168.18 -115.26 REMARK 500 5 THR A 19 -43.22 -151.26 REMARK 500 5 GLU A 21 -87.53 -88.91 REMARK 500 5 LYS A 22 -30.92 179.97 REMARK 500 5 HIS A 26 89.01 -5.92 REMARK 500 5 LYS A 27 -91.73 -83.83 REMARK 500 5 LEU A 32 49.72 -92.45 REMARK 500 5 HIS A 33 95.98 -54.10 REMARK 500 5 GLU A 44 24.90 -79.93 REMARK 500 5 TYR A 46 174.34 75.31 REMARK 500 5 ASN A 56 52.93 -91.67 REMARK 500 5 ASP A 60 -83.91 -105.57 REMARK 500 5 GLU A 61 -53.81 -170.10 REMARK 500 5 ASN A 70 81.18 -166.28 REMARK 500 5 PRO A 76 88.99 -69.08 REMARK 500 5 MET A 80 89.81 -37.99 REMARK 500 5 LYS A 87 110.81 -163.40 REMARK 500 5 ASN A 92 47.35 -76.39 REMARK 500 5 ASP A 93 -46.04 -166.41 REMARK 500 5 SER A 102 96.76 -169.83 REMARK 500 6 ALA A -1 108.45 63.59 REMARK 500 6 LYS A 5 -43.73 79.67 REMARK 500 6 ARG A 13 59.97 -140.50 REMARK 500 6 CYS A 14 -61.10 -177.34 REMARK 500 6 VAL A 20 45.40 -102.03 REMARK 500 6 PRO A 25 -77.39 -71.20 REMARK 500 6 HIS A 26 90.38 135.99 REMARK 500 6 LYS A 27 -104.13 -88.93 REMARK 500 6 SER A 40 84.23 -65.43 REMARK 500 6 TYR A 46 148.43 76.21 REMARK 500 6 TYR A 48 -161.00 58.76 REMARK 500 6 GLU A 61 -48.41 93.07 REMARK 500 6 ASN A 70 80.84 -166.93 REMARK 500 6 MET A 80 85.93 -59.38 REMARK 500 6 ALA A 81 43.80 -78.37 REMARK 500 6 LEU A 85 -73.34 -77.72 REMARK 500 6 LYS A 86 75.26 48.59 REMARK 500 6 LYS A 89 -65.01 -91.44 REMARK 500 6 SER A 102 91.74 -168.60 REMARK 500 7 GLU A -4 84.83 167.99 REMARK 500 7 ALA A 3 -34.33 -164.52 REMARK 500 7 LYS A 5 -31.82 169.12 REMARK 500 7 CYS A 14 -65.80 171.21 REMARK 500 7 LYS A 27 -113.22 -77.61 REMARK 500 7 HIS A 33 25.78 -71.06 REMARK 500 7 ILE A 35 -154.41 -82.66 REMARK 500 7 SER A 40 97.08 -62.68 REMARK 500 7 GLN A 42 -52.02 -122.72 REMARK 500 7 ALA A 43 -146.51 43.60 REMARK 500 7 ASN A 70 78.12 -165.31 REMARK 500 7 PRO A 76 94.29 -69.47 REMARK 500 7 MET A 80 95.46 -64.72 REMARK 500 7 ALA A 81 43.69 -79.45 REMARK 500 7 LEU A 85 74.06 -59.49 REMARK 500 7 GLU A 88 -82.43 -77.74 REMARK 500 7 SER A 102 -78.87 -137.27 REMARK 500 8 GLU A -4 -63.14 70.41 REMARK 500 8 PHE A -3 -66.86 -154.87 REMARK 500 8 LYS A -2 83.77 76.78 REMARK 500 8 LYS A 5 -48.74 74.31 REMARK 500 8 CYS A 14 -62.65 176.17 REMARK 500 8 CYS A 17 -66.95 -98.74 REMARK 500 8 VAL A 28 -72.78 25.00 REMARK 500 8 HIS A 33 87.64 -65.28 REMARK 500 8 PHE A 36 91.77 -59.53 REMARK 500 8 GLN A 42 -61.55 -95.05 REMARK 500 8 ALA A 43 -150.43 36.17 REMARK 500 8 GLU A 44 78.73 -152.84 REMARK 500 8 TYR A 48 179.46 65.32 REMARK 500 8 ASN A 56 86.43 -63.20 REMARK 500 8 ASN A 70 76.36 -169.06 REMARK 500 8 LYS A 79 44.60 -86.99 REMARK 500 8 GLU A 88 -66.07 73.22 REMARK 500 9 PHE A -3 -81.05 58.76 REMARK 500 9 LYS A -2 142.41 68.22 REMARK 500 9 ALA A -1 -96.12 -66.46 REMARK 500 9 ARG A 13 64.26 -150.72 REMARK 500 9 CYS A 14 -67.99 175.94 REMARK 500 9 VAL A 28 -79.96 21.30 REMARK 500 9 LEU A 32 -67.88 -94.37 REMARK 500 9 HIS A 33 -120.49 54.62 REMARK 500 9 SER A 40 88.92 -65.17 REMARK 500 9 TYR A 46 -175.77 69.30 REMARK 500 9 ASN A 70 79.22 -163.28 REMARK 500 9 PRO A 76 86.03 -69.51 REMARK 500 9 LYS A 79 46.70 -86.89 REMARK 500 9 PHE A 82 -102.33 -80.42 REMARK 500 9 LYS A 89 -75.15 -114.73 REMARK 500 10 ALA A -1 -93.54 54.97 REMARK 500 10 SER A 2 72.13 104.18 REMARK 500 10 ALA A 3 -86.93 1.61 REMARK 500 10 LYS A 4 35.27 31.45 REMARK 500 10 LYS A 5 -55.23 158.98 REMARK 500 10 CYS A 14 -59.09 -173.10 REMARK 500 10 LEU A 15 -7.64 -59.64 REMARK 500 10 HIS A 26 82.60 4.51 REMARK 500 10 LYS A 27 -107.78 -81.74 REMARK 500 10 LEU A 32 -60.08 -92.02 REMARK 500 10 HIS A 33 86.47 26.57 REMARK 500 10 SER A 40 87.92 -67.52 REMARK 500 10 ALA A 51 -70.31 -50.95 REMARK 500 10 ASN A 70 75.19 -169.98 REMARK 500 10 PRO A 76 92.08 -67.92 REMARK 500 10 LYS A 79 40.91 -90.54 REMARK 500 10 LEU A 85 -74.70 -120.37 REMARK 500 10 LYS A 86 -61.93 75.01 REMARK 500 10 LYS A 87 110.91 -37.41 REMARK 500 10 ASP A 90 -54.37 -126.74 REMARK 500 11 GLU A -4 103.25 -171.16 REMARK 500 11 LYS A -2 114.95 70.08 REMARK 500 11 CYS A 14 -62.46 -179.07 REMARK 500 11 VAL A 20 30.97 -98.19 REMARK 500 11 VAL A 28 -76.63 25.55 REMARK 500 11 LEU A 32 40.12 -101.81 REMARK 500 11 HIS A 33 92.31 -51.03 REMARK 500 11 ILE A 35 -155.17 -69.32 REMARK 500 11 TYR A 46 167.76 73.75 REMARK 500 11 TYR A 48 -166.16 57.48 REMARK 500 11 ASP A 60 24.82 -153.51 REMARK 500 11 GLU A 61 -52.96 70.59 REMARK 500 11 ASN A 70 80.81 -165.26 REMARK 500 11 PRO A 76 96.39 -68.07 REMARK 500 11 THR A 78 35.06 -68.94 REMARK 500 11 LYS A 79 56.76 -21.48 REMARK 500 11 LYS A 86 46.24 -86.65 REMARK 500 12 PHE A -3 106.20 -52.14 REMARK 500 12 LYS A -2 55.24 -98.62 REMARK 500 12 ALA A -1 -114.53 51.16 REMARK 500 12 ALA A 3 -39.58 -30.02 REMARK 500 12 LYS A 4 53.03 -57.36 REMARK 500 12 LYS A 5 -47.92 169.83 REMARK 500 12 CYS A 14 -53.39 -125.32 REMARK 500 12 HIS A 18 -161.92 -115.65 REMARK 500 12 THR A 19 -42.68 -155.13 REMARK 500 12 VAL A 20 12.48 84.91 REMARK 500 12 PRO A 25 -160.28 -71.20 REMARK 500 12 LYS A 27 -98.09 -89.40 REMARK 500 12 PHE A 36 150.31 72.22 REMARK 500 12 ASP A 50 -47.71 68.42 REMARK 500 12 ASN A 70 78.82 -166.22 REMARK 500 12 PRO A 76 88.03 -69.08 REMARK 500 12 MET A 80 93.62 -68.69 REMARK 500 12 LYS A 87 -19.75 -149.77 REMARK 500 12 GLU A 88 -63.95 70.16 REMARK 500 12 ASP A 93 -66.03 -171.80 REMARK 500 12 SER A 102 45.48 -93.37 REMARK 500 13 PHE A -3 88.15 53.93 REMARK 500 13 ALA A -1 -163.48 59.72 REMARK 500 13 LYS A 4 -96.89 34.82 REMARK 500 13 ALA A 7 -72.27 -52.05 REMARK 500 13 ARG A 13 46.07 -142.12 REMARK 500 13 CYS A 14 -62.51 -168.60 REMARK 500 13 CYS A 17 -64.33 -97.30 REMARK 500 13 PRO A 25 3.84 -65.66 REMARK 500 13 HIS A 26 -75.59 70.92 REMARK 500 13 LYS A 27 140.00 34.86 REMARK 500 13 VAL A 28 -80.22 34.63 REMARK 500 13 PHE A 36 108.24 -52.84 REMARK 500 13 ARG A 38 -169.18 -116.71 REMARK 500 13 ALA A 43 -138.71 34.67 REMARK 500 13 GLU A 44 -56.68 -139.59 REMARK 500 13 TYR A 48 -166.89 65.48 REMARK 500 13 ASP A 50 -45.98 74.21 REMARK 500 13 ASN A 70 83.06 -170.63 REMARK 500 13 PRO A 76 91.66 -66.59 REMARK 500 13 MET A 80 85.45 -56.70 REMARK 500 13 ALA A 81 39.38 -78.32 REMARK 500 13 GLU A 88 -33.99 80.50 REMARK 500 14 GLU A -4 177.78 58.67 REMARK 500 14 SER A 2 134.87 72.85 REMARK 500 14 ALA A 3 -33.11 -170.36 REMARK 500 14 CYS A 14 -56.47 -152.06 REMARK 500 14 HIS A 18 -165.20 -119.51 REMARK 500 14 THR A 19 -40.17 -145.64 REMARK 500 14 PRO A 25 -158.75 -73.69 REMARK 500 14 LYS A 27 -103.27 -95.40 REMARK 500 14 LEU A 32 37.23 -84.47 REMARK 500 14 HIS A 33 109.74 -51.59 REMARK 500 14 ILE A 35 -162.64 -68.66 REMARK 500 14 SER A 47 67.76 -113.69 REMARK 500 14 ALA A 51 -72.78 -52.14 REMARK 500 14 ASN A 62 -70.13 -64.75 REMARK 500 14 ASN A 70 80.12 -167.61 REMARK 500 14 PRO A 76 85.51 -69.20 REMARK 500 14 ALA A 81 48.03 -85.41 REMARK 500 14 LEU A 85 -81.24 -116.08 REMARK 500 14 LYS A 86 -34.35 71.78 REMARK 500 14 LYS A 87 167.44 -49.68 REMARK 500 14 GLU A 88 -79.24 -94.21 REMARK 500 15 GLU A -4 179.71 56.81 REMARK 500 15 PHE A -3 -74.56 59.91 REMARK 500 15 LYS A -2 161.04 63.37 REMARK 500 15 SER A 2 152.08 102.29 REMARK 500 15 LYS A 4 -87.14 -4.95 REMARK 500 15 ARG A 13 17.47 -140.89 REMARK 500 15 CYS A 14 -53.50 -149.03 REMARK 500 15 LEU A 15 -9.89 -57.47 REMARK 500 15 THR A 19 -132.11 -153.86 REMARK 500 15 GLU A 21 -40.72 -28.33 REMARK 500 15 PRO A 25 -124.89 -76.93 REMARK 500 15 LYS A 27 -121.00 -81.49 REMARK 500 15 LEU A 32 -99.29 -94.56 REMARK 500 15 HIS A 33 -38.91 66.52 REMARK 500 15 GLN A 42 -55.53 -128.06 REMARK 500 15 ALA A 43 -145.88 42.46 REMARK 500 15 SER A 47 77.13 -100.71 REMARK 500 15 TYR A 48 162.29 -49.03 REMARK 500 15 ASP A 50 -43.64 89.18 REMARK 500 15 ASN A 70 82.74 -166.32 REMARK 500 15 ILE A 75 79.46 -116.61 REMARK 500 15 PRO A 76 95.53 -67.62 REMARK 500 15 MET A 80 90.37 -63.34 REMARK 500 15 ALA A 81 47.08 -81.08 REMARK 500 15 GLU A 88 -66.43 -92.60 REMARK 500 15 ARG A 91 -70.13 -55.62 REMARK 500 16 GLU A -4 -67.00 62.83 REMARK 500 16 LYS A -2 -72.58 -101.13 REMARK 500 16 ALA A -1 -27.55 -163.85 REMARK 500 16 LYS A 5 -45.93 163.39 REMARK 500 16 CYS A 14 -99.80 -102.42 REMARK 500 16 LEU A 15 47.89 -12.70 REMARK 500 16 LYS A 22 96.82 78.64 REMARK 500 16 PRO A 25 12.34 -65.77 REMARK 500 16 HIS A 26 -75.11 68.09 REMARK 500 16 LYS A 27 -122.11 74.92 REMARK 500 16 LEU A 32 52.73 -106.70 REMARK 500 16 HIS A 33 -119.56 -52.95 REMARK 500 16 PHE A 36 96.23 -67.79 REMARK 500 16 ALA A 43 -144.71 32.83 REMARK 500 16 GLU A 44 37.10 -155.23 REMARK 500 16 LEU A 68 22.18 -74.25 REMARK 500 16 ASN A 70 65.13 -163.71 REMARK 500 16 PRO A 76 86.87 -67.18 REMARK 500 16 LYS A 79 30.15 -90.33 REMARK 500 16 PHE A 82 -75.01 -75.73 REMARK 500 16 LEU A 85 123.62 -38.29 REMARK 500 17 PHE A -3 165.71 -47.04 REMARK 500 17 ALA A -1 -147.16 45.20 REMARK 500 17 LYS A 5 -49.50 169.56 REMARK 500 17 CYS A 14 -53.92 -127.18 REMARK 500 17 THR A 19 -42.17 -150.50 REMARK 500 17 LYS A 22 37.46 -73.72 REMARK 500 17 PRO A 25 47.27 -77.65 REMARK 500 17 HIS A 26 66.38 17.89 REMARK 500 17 LYS A 27 -96.41 -66.40 REMARK 500 17 LEU A 32 33.75 -87.19 REMARK 500 17 ILE A 35 -139.95 -77.35 REMARK 500 17 SER A 40 83.57 -67.37 REMARK 500 17 TYR A 46 -176.69 82.59 REMARK 500 17 ASN A 56 96.43 -61.78 REMARK 500 17 ASN A 70 83.47 -164.12 REMARK 500 17 MET A 80 82.42 -60.31 REMARK 500 17 ALA A 81 45.68 -81.17 REMARK 500 17 PHE A 82 -100.98 -85.34 REMARK 500 17 GLU A 88 -62.13 77.00 REMARK 500 17 ASN A 92 32.24 -72.49 REMARK 500 17 ASP A 93 -56.51 -142.24 REMARK 500 17 SER A 102 93.12 -171.97 REMARK 500 18 GLU A -4 -67.74 -107.89 REMARK 500 18 LYS A 4 50.66 -66.07 REMARK 500 18 LYS A 5 -49.61 -179.82 REMARK 500 18 CYS A 14 -60.06 -178.85 REMARK 500 18 LEU A 15 -8.34 -59.61 REMARK 500 18 VAL A 20 63.18 -116.08 REMARK 500 18 LYS A 27 -117.78 -84.39 REMARK 500 18 HIS A 33 69.47 -64.96 REMARK 500 18 PHE A 36 82.09 -58.48 REMARK 500 18 TYR A 46 -60.15 73.47 REMARK 500 18 SER A 47 -31.61 85.32 REMARK 500 18 TYR A 48 -179.41 64.44 REMARK 500 18 ASN A 56 61.60 64.71 REMARK 500 18 ASP A 60 -109.75 -121.57 REMARK 500 18 GLU A 61 -49.26 -140.39 REMARK 500 18 ASN A 70 80.06 -167.17 REMARK 500 18 THR A 78 42.56 -80.20 REMARK 500 18 LYS A 79 42.21 -17.68 REMARK 500 19 GLU A -4 -84.58 59.39 REMARK 500 19 LYS A -2 -75.39 -110.08 REMARK 500 19 LYS A 5 -60.36 73.70 REMARK 500 19 CYS A 14 -58.01 -149.19 REMARK 500 19 CYS A 17 -69.62 -95.23 REMARK 500 19 VAL A 28 -79.06 31.34 REMARK 500 19 HIS A 33 48.82 36.83 REMARK 500 19 PHE A 36 103.81 -52.46 REMARK 500 19 TYR A 46 141.48 77.46 REMARK 500 19 TYR A 48 179.68 59.68 REMARK 500 19 ASP A 50 -49.24 70.25 REMARK 500 19 GLU A 61 -64.37 66.60 REMARK 500 19 ASN A 70 73.39 -170.87 REMARK 500 19 PRO A 76 86.27 -66.86 REMARK 500 19 MET A 80 88.06 -66.92 REMARK 500 19 LYS A 86 -57.94 -157.49 REMARK 500 19 SER A 102 92.59 -169.76 REMARK 500 20 GLU A -4 175.85 77.59 REMARK 500 20 PHE A -3 38.72 38.65 REMARK 500 20 LYS A -2 -57.84 74.30 REMARK 500 20 ALA A -1 -169.88 60.16 REMARK 500 20 ARG A 13 59.91 -147.36 REMARK 500 20 CYS A 14 -62.32 -179.29 REMARK 500 20 LEU A 15 -9.42 -58.47 REMARK 500 20 HIS A 18 -168.92 -110.71 REMARK 500 20 VAL A 20 44.63 -105.91 REMARK 500 20 HIS A 26 2.20 119.60 REMARK 500 20 LYS A 27 -89.76 -3.24 REMARK 500 20 VAL A 28 -61.03 -94.63 REMARK 500 20 LEU A 32 -72.53 -91.82 REMARK 500 20 HIS A 33 92.68 30.51 REMARK 500 20 SER A 40 97.23 -55.15 REMARK 500 20 TYR A 46 179.09 76.10 REMARK 500 20 ASP A 60 -89.65 -118.13 REMARK 500 20 GLU A 61 -52.24 -163.90 REMARK 500 20 ASN A 70 82.03 -167.67 REMARK 500 20 MET A 80 82.98 -63.33 REMARK 500 20 ALA A 81 48.20 -78.60 REMARK 500 20 LYS A 86 -74.67 55.76 REMARK 500 20 SER A 102 94.12 -168.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A -5 GLU A -4 3 137.70 REMARK 500 THR A 78 LYS A 79 3 -130.86 REMARK 500 HIS A 18 THR A 19 9 146.80 REMARK 500 PHE A 82 GLY A 83 9 -149.52 REMARK 500 THR A 78 LYS A 79 11 -141.49 REMARK 500 THR A -5 GLU A -4 12 -138.11 REMARK 500 PHE A 82 GLY A 83 16 -125.43 REMARK 500 GLY A 83 GLY A 84 16 -138.33 REMARK 500 THR A -5 GLU A -4 17 145.85 REMARK 500 THR A 78 LYS A 79 18 -140.51 REMARK 500 HIS A 18 THR A 19 19 140.56 REMARK 500 THR A -5 GLU A -4 20 -145.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 46 0.14 SIDE_CHAIN REMARK 500 1 TYR A 48 0.15 SIDE_CHAIN REMARK 500 1 TYR A 97 0.09 SIDE_CHAIN REMARK 500 2 HIS A 26 0.11 SIDE_CHAIN REMARK 500 2 PHE A 36 0.08 SIDE_CHAIN REMARK 500 2 TYR A 46 0.17 SIDE_CHAIN REMARK 500 2 TYR A 48 0.07 SIDE_CHAIN REMARK 500 2 TYR A 74 0.09 SIDE_CHAIN REMARK 500 3 HIS A 26 0.10 SIDE_CHAIN REMARK 500 3 PHE A 36 0.10 SIDE_CHAIN REMARK 500 3 TYR A 46 0.11 SIDE_CHAIN REMARK 500 3 TYR A 74 0.09 SIDE_CHAIN REMARK 500 4 HIS A 26 0.11 SIDE_CHAIN REMARK 500 4 HIS A 33 0.09 SIDE_CHAIN REMARK 500 4 PHE A 36 0.08 SIDE_CHAIN REMARK 500 4 TYR A 46 0.15 SIDE_CHAIN REMARK 500 4 TYR A 48 0.12 SIDE_CHAIN REMARK 500 4 TYR A 97 0.12 SIDE_CHAIN REMARK 500 5 HIS A 26 0.12 SIDE_CHAIN REMARK 500 5 TYR A 46 0.22 SIDE_CHAIN REMARK 500 5 TYR A 48 0.08 SIDE_CHAIN REMARK 500 5 TYR A 67 0.07 SIDE_CHAIN REMARK 500 6 TYR A 46 0.12 SIDE_CHAIN REMARK 500 6 TYR A 48 0.07 SIDE_CHAIN REMARK 500 6 TYR A 67 0.08 SIDE_CHAIN REMARK 500 7 TYR A 46 0.16 SIDE_CHAIN REMARK 500 7 TYR A 48 0.07 SIDE_CHAIN REMARK 500 7 TYR A 67 0.08 SIDE_CHAIN REMARK 500 7 TYR A 74 0.08 SIDE_CHAIN REMARK 500 8 HIS A 26 0.09 SIDE_CHAIN REMARK 500 8 TYR A 46 0.21 SIDE_CHAIN REMARK 500 8 TYR A 74 0.07 SIDE_CHAIN REMARK 500 9 TYR A 46 0.18 SIDE_CHAIN REMARK 500 10 TYR A 46 0.21 SIDE_CHAIN REMARK 500 11 TYR A 46 0.21 SIDE_CHAIN REMARK 500 11 TYR A 48 0.13 SIDE_CHAIN REMARK 500 12 TYR A 46 0.16 SIDE_CHAIN REMARK 500 12 TYR A 67 0.07 SIDE_CHAIN REMARK 500 13 HIS A 26 0.12 SIDE_CHAIN REMARK 500 13 TYR A 46 0.23 SIDE_CHAIN REMARK 500 13 TYR A 67 0.11 SIDE_CHAIN REMARK 500 13 TYR A 97 0.11 SIDE_CHAIN REMARK 500 14 TYR A 46 0.19 SIDE_CHAIN REMARK 500 14 TYR A 48 0.10 SIDE_CHAIN REMARK 500 14 TYR A 67 0.08 SIDE_CHAIN REMARK 500 14 TYR A 97 0.09 SIDE_CHAIN REMARK 500 15 TYR A 46 0.19 SIDE_CHAIN REMARK 500 15 TYR A 67 0.08 SIDE_CHAIN REMARK 500 16 HIS A 26 0.14 SIDE_CHAIN REMARK 500 16 TYR A 46 0.30 SIDE_CHAIN REMARK 500 16 TYR A 48 0.15 SIDE_CHAIN REMARK 500 17 PHE A -3 0.08 SIDE_CHAIN REMARK 500 17 TYR A 46 0.17 SIDE_CHAIN REMARK 500 17 TYR A 48 0.15 SIDE_CHAIN REMARK 500 17 TYR A 67 0.10 SIDE_CHAIN REMARK 500 17 TYR A 97 0.07 SIDE_CHAIN REMARK 500 18 TYR A 46 0.15 SIDE_CHAIN REMARK 500 18 TYR A 48 0.08 SIDE_CHAIN REMARK 500 19 HIS A 26 0.10 SIDE_CHAIN REMARK 500 19 PHE A 36 0.08 SIDE_CHAIN REMARK 500 19 TYR A 46 0.20 SIDE_CHAIN REMARK 500 19 TYR A 97 0.10 SIDE_CHAIN REMARK 500 20 PHE A -3 0.12 SIDE_CHAIN REMARK 500 20 PHE A 36 0.07 SIDE_CHAIN REMARK 500 20 TYR A 46 0.16 SIDE_CHAIN REMARK 500 20 TYR A 48 0.12 SIDE_CHAIN REMARK 500 20 TYR A 67 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 HEC A 104 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 18 NE2 REMARK 620 2 MET A 80 SD 169.3 REMARK 620 N 1
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 104
DBREF 1YIC A -5 103 UNP P00044 CYC1_YEAST 1 108
SEQADV 1YIC M3L A 72 UNP P00044 LYS 77 MODIFIED RESIDUE SEQADV 1YIC SER A 102 UNP P00044 CYS 107 ENGINEERED
SEQRES 1 A 108 THR GLU PHE LYS ALA GLY SER ALA LYS LYS GLY ALA THR SEQRES 2 A 108 LEU PHE LYS THR ARG CYS LEU GLN CYS HIS THR VAL GLU SEQRES 3 A 108 LYS GLY GLY PRO HIS LYS VAL GLY PRO ASN LEU HIS GLY SEQRES 4 A 108 ILE PHE GLY ARG HIS SER GLY GLN ALA GLU GLY TYR SER SEQRES 5 A 108 TYR THR ASP ALA ASN ILE LYS LYS ASN VAL LEU TRP ASP SEQRES 6 A 108 GLU ASN ASN MET SER GLU TYR LEU THR ASN PRO M3L LYS SEQRES 7 A 108 TYR ILE PRO GLY THR LYS MET ALA PHE GLY GLY LEU LYS SEQRES 8 A 108 LYS GLU LYS ASP ARG ASN ASP LEU ILE THR TYR LEU LYS SEQRES 9 A 108 LYS ALA SER GLU
MODRES 1YIC M3L A 72 LYS N-TRIMETHYLLYSINE
HET M3L A 72 31 HET HEC A 104 75
HETNAM M3L N-TRIMETHYLLYSINE HETNAM HEC HEME C
FORMUL 1 M3L C9 H21 N2 O2 1+ FORMUL 2 HEC C34 H34 FE N4 O4
HELIX 1 1 LYS A 4 ARG A 13 5 10 HELIX 2 2 ASP A 50 LYS A 55 1 6 HELIX 3 3 GLU A 61 THR A 69 1 9 HELIX 4 4 PRO A 71 ILE A 75 5 5 HELIX 5 5 ASP A 90 ALA A 101 1 12
LINK N M3L A 72 C PRO A 71 1555 1555 1.33 LINK C M3L A 72 N LYS A 73 1555 1555 1.34 LINK FE HEC A 104 NE2 HIS A 18 1555 1555 1.85 LINK FE HEC A 104 SD MET A 80 1555 1555 2.19 LINK CAB HEC A 104 SG CYS A 14 1555 1555 1.80 LINK CAC HEC A 104 SG CYS A 17 1555 1555 1.81
SITE 1 AC1 25 ARG A 13 CYS A 14 CYS A 17 HIS A 18 SITE 2 AC1 25 VAL A 28 GLY A 29 LEU A 32 ILE A 35 SITE 3 AC1 25 SER A 40 GLY A 41 TYR A 46 TYR A 48 SITE 4 AC1 25 THR A 49 ASN A 52 TRP A 59 MET A 64 SITE 5 AC1 25 TYR A 67 LEU A 68 THR A 78 LYS A 79 SITE 6 AC1 25 MET A 80 ALA A 81 PHE A 82 LEU A 85 SITE 7 AC1 25 LEU A 94
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000