10 20 30 40 50 60 70 80 1YGO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 05-JAN-05 1YGO
TITLE SOLUTION STRUCTURE OF THE PELLE DEATH DOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE SERINE/THREONINE-PROTEIN KINASE PELLE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PELLE KINASE DEATH DOMAIN RESIDUES 26-131; COMPND 5 EC: 2.7.1.37; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: PLL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A
KEYWDS ANTI-PARALLEL 6 HELIX BUNDLE, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.C.MONCRIEFFE,K.M.STOTT,N.J.GAY
REVDAT 2 24-FEB-09 1YGO 1 VERSN REVDAT 1 26-JUL-05 1YGO 0
JRNL AUTH M.C.MONCRIEFFE,K.M.STOTT,N.J.GAY JRNL TITL SOLUTION STRUCTURE OF THE ISOLATED PELLE DEATH JRNL TITL 2 DOMAIN. JRNL REF FEBS LETT. V. 579 3920 2005 JRNL REFN ISSN 0014-5793 JRNL PMID 16004997 JRNL DOI 10.1016/J.FEBSLET.2005.06.009
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER, A REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1YGO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-05. REMARK 100 THE RCSB ID CODE IS RCSB031492.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1MM PELLE DEATH DOMAIN, U- REMARK 210 15N, 13C; 20MM PHOSPHATE, REMARK 210 100MM NACL, PH 7.6; 10% D20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ANSIG 1.03 FOR OPENGL, AZARA REMARK 210 2.5, ARIA 1.2 REMARK 210 METHOD USED : SIMULATED ANEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -28.19 -144.25 REMARK 500 1 LYS A 42 102.29 60.46 REMARK 500 1 ASN A 74 145.64 65.44 REMARK 500 1 HIS A 75 -152.49 -161.41 REMARK 500 1 ASP A 98 1.31 -69.18 REMARK 500 1 HIS A 105 84.63 -67.30 REMARK 500 1 LYS A 106 -40.01 -168.18 REMARK 500 2 MET A 4 84.62 55.49 REMARK 500 2 SER A 5 -165.78 57.38 REMARK 500 2 ASP A 8 -165.93 -77.49 REMARK 500 2 LYS A 42 94.80 57.85 REMARK 500 2 ARG A 59 -70.98 -144.34 REMARK 500 2 HIS A 75 -162.32 -77.50 REMARK 500 2 ASP A 98 -19.63 -176.40 REMARK 500 2 LYS A 106 7.14 -172.23 REMARK 500 2 TYR A 107 12.96 -153.12 REMARK 500 3 SER A 2 123.89 64.82 REMARK 500 3 HIS A 3 105.06 61.65 REMARK 500 3 MET A 4 -72.12 -90.84 REMARK 500 3 HIS A 6 -73.72 -60.64 REMARK 500 3 ASP A 8 86.30 57.27 REMARK 500 3 LEU A 16 108.75 -51.42 REMARK 500 3 LYS A 42 93.08 58.53 REMARK 500 3 ARG A 59 -156.78 56.86 REMARK 500 3 HIS A 75 -163.95 -76.79 REMARK 500 3 LYS A 106 -32.28 -168.39 REMARK 500 4 SER A 2 -39.06 -144.45 REMARK 500 4 SER A 5 70.09 55.69 REMARK 500 4 HIS A 6 -174.51 58.97 REMARK 500 4 LEU A 16 109.58 -53.06 REMARK 500 4 LYS A 42 93.17 56.76 REMARK 500 4 SER A 101 29.20 -179.96 REMARK 500 4 GLU A 102 -68.23 -98.38 REMARK 500 4 LYS A 106 1.65 -173.37 REMARK 500 4 TYR A 107 9.99 -151.46 REMARK 500 5 SER A 2 -67.93 -145.39 REMARK 500 5 THR A 10 -90.73 -138.19 REMARK 500 5 MET A 11 119.16 -161.65 REMARK 500 5 LYS A 42 96.35 57.74 REMARK 500 5 ASN A 74 143.12 65.43 REMARK 500 5 HIS A 75 -156.03 -161.68 REMARK 500 5 ASP A 98 6.04 -67.92 REMARK 500 5 HIS A 105 84.19 -67.76 REMARK 500 5 LYS A 106 -40.48 -165.32 REMARK 500 6 HIS A 3 -71.38 -87.36 REMARK 500 6 HIS A 6 81.77 54.11 REMARK 500 6 LEU A 7 -94.47 57.50 REMARK 500 6 ASP A 8 82.67 -167.73 REMARK 500 6 LYS A 42 94.16 57.14 REMARK 500 6 SER A 60 96.80 -69.86 REMARK 500 6 GLN A 72 3.75 -152.12 REMARK 500 6 ASN A 74 120.92 63.50 REMARK 500 6 HIS A 75 -153.71 -159.23 REMARK 500 6 LYS A 97 54.66 -99.99 REMARK 500 6 ASP A 98 8.15 -172.91 REMARK 500 6 SER A 101 171.33 -55.02 REMARK 500 6 LYS A 106 -42.79 -167.44 REMARK 500 7 ASP A 8 82.09 56.69 REMARK 500 7 THR A 10 -81.72 -93.54 REMARK 500 7 LEU A 16 108.61 -52.57 REMARK 500 7 LYS A 42 101.27 59.61 REMARK 500 7 HIS A 75 -160.67 -77.47 REMARK 500 7 ASP A 98 -22.37 -174.56 REMARK 500 7 HIS A 105 72.52 -110.69 REMARK 500 7 LYS A 106 -33.51 -153.22 REMARK 500 8 SER A 2 71.79 56.26 REMARK 500 8 SER A 5 78.37 56.69 REMARK 500 8 HIS A 6 -165.22 -71.04 REMARK 500 8 ASP A 8 58.04 -151.75 REMARK 500 8 LEU A 16 106.72 -51.89 REMARK 500 8 LYS A 42 103.96 60.93 REMARK 500 8 SER A 60 99.88 -69.66 REMARK 500 8 HIS A 75 -163.43 -76.59 REMARK 500 8 ASP A 98 13.13 -68.99 REMARK 500 8 HIS A 105 83.79 -66.55 REMARK 500 8 LYS A 106 -41.38 -164.39 REMARK 500 9 SER A 2 -49.92 -148.50 REMARK 500 9 SER A 5 -20.74 -164.40 REMARK 500 9 LEU A 16 106.94 -52.97 REMARK 500 9 PRO A 17 102.37 -59.92 REMARK 500 9 LYS A 42 97.17 57.75 REMARK 500 9 ARG A 59 -78.93 -146.24 REMARK 500 9 LYS A 88 45.30 39.32 REMARK 500 9 SER A 101 -40.38 177.34 REMARK 500 9 HIS A 105 83.81 -63.07 REMARK 500 9 LYS A 106 -7.25 -176.33 REMARK 500 9 TYR A 107 7.57 -151.14 REMARK 500 10 ASP A 8 109.39 -162.80 REMARK 500 10 THR A 10 -85.07 -84.78 REMARK 500 10 LYS A 42 85.17 55.40 REMARK 500 10 ARG A 59 -7.55 -140.66 REMARK 500 10 SER A 60 107.34 60.20 REMARK 500 10 ASP A 98 3.10 -68.50 REMARK 500 10 SER A 101 -175.53 -55.78 REMARK 500 10 HIS A 105 81.38 -68.08 REMARK 500 10 LYS A 106 -42.69 -167.34 REMARK 500 11 HIS A 6 -157.44 -110.39 REMARK 500 11 ASP A 8 -147.70 -110.54 REMARK 500 11 ASN A 9 160.68 65.17 REMARK 500 11 LYS A 42 97.68 58.46 REMARK 500 11 HIS A 75 -162.57 -77.43 REMARK 500 11 ASP A 98 2.16 -69.08 REMARK 500 11 LEU A 104 31.98 -85.00 REMARK 500 11 LYS A 106 -33.11 -165.39 REMARK 500 12 SER A 2 132.26 65.96 REMARK 500 12 MET A 4 78.41 56.38 REMARK 500 12 SER A 5 73.44 -104.59 REMARK 500 12 HIS A 6 -0.70 -165.56 REMARK 500 12 LEU A 7 -169.70 -113.24 REMARK 500 12 THR A 10 -82.32 -119.84 REMARK 500 12 LYS A 42 102.77 59.87 REMARK 500 12 GLN A 72 16.59 -154.19 REMARK 500 12 ASN A 74 88.76 62.77 REMARK 500 12 ASP A 98 3.50 -67.48 REMARK 500 12 LYS A 106 -33.31 -167.11 REMARK 500 13 SER A 2 -28.91 -152.52 REMARK 500 13 SER A 5 179.16 60.17 REMARK 500 13 LEU A 7 -60.14 -92.32 REMARK 500 13 THR A 10 -102.46 -123.85 REMARK 500 13 LEU A 16 109.34 -51.01 REMARK 500 13 LYS A 42 101.98 60.42 REMARK 500 13 HIS A 75 -162.65 -77.34 REMARK 500 13 ASP A 98 11.01 -172.10 REMARK 500 13 LYS A 106 -40.44 -164.40 REMARK 500 14 HIS A 6 82.64 56.12 REMARK 500 14 LEU A 7 -45.08 -133.32 REMARK 500 14 THR A 10 -131.07 -124.78 REMARK 500 14 LEU A 16 104.82 -51.14 REMARK 500 14 LYS A 42 96.03 56.99 REMARK 500 14 HIS A 75 -168.19 -77.82 REMARK 500 14 ASP A 98 1.20 -67.50 REMARK 500 14 HIS A 105 83.70 -67.58 REMARK 500 14 LYS A 106 -42.75 -165.13 REMARK 500 15 HIS A 6 -170.17 59.09 REMARK 500 15 THR A 10 -90.71 -146.71 REMARK 500 15 LEU A 16 105.13 -50.46 REMARK 500 15 LYS A 42 100.57 60.48 REMARK 500 15 GLN A 56 3.30 -63.99 REMARK 500 15 ILE A 96 -103.75 -108.95 REMARK 500 15 LYS A 97 -51.77 72.80 REMARK 500 15 HIS A 105 81.00 -69.18 REMARK 500 15 LYS A 106 1.35 -169.69 REMARK 500 15 TYR A 107 12.20 -151.72 REMARK 500 16 SER A 2 78.51 -160.44 REMARK 500 16 MET A 4 94.88 -160.69 REMARK 500 16 HIS A 6 86.66 56.64 REMARK 500 16 THR A 10 -108.21 -136.57 REMARK 500 16 LYS A 42 102.67 59.55 REMARK 500 16 HIS A 75 -164.37 -77.25 REMARK 500 16 ILE A 96 -97.85 -108.47 REMARK 500 16 LYS A 97 -69.76 67.88 REMARK 500 16 LYS A 106 -35.95 175.69 REMARK 500 17 SER A 2 -76.51 -115.23 REMARK 500 17 MET A 4 -49.83 -148.04 REMARK 500 17 LEU A 7 -76.72 -133.11 REMARK 500 17 ASP A 8 -90.20 -158.66 REMARK 500 17 ASN A 9 10.15 -171.19 REMARK 500 17 THR A 10 -159.28 -71.67 REMARK 500 17 LYS A 42 98.02 60.36 REMARK 500 17 SER A 60 57.05 -112.04 REMARK 500 17 ILE A 96 -93.82 -109.94 REMARK 500 17 LYS A 97 -74.05 65.72 REMARK 500 17 ASP A 98 8.81 -65.94 REMARK 500 17 VAL A 100 -151.21 -100.09 REMARK 500 17 SER A 101 153.16 -49.98 REMARK 500 17 HIS A 105 83.44 -65.47 REMARK 500 17 LYS A 106 4.93 -172.29 REMARK 500 17 TYR A 107 0.13 -150.28 REMARK 500 18 HIS A 3 70.44 -114.06 REMARK 500 18 SER A 5 -179.72 60.64 REMARK 500 18 ASN A 9 63.91 -165.80 REMARK 500 18 THR A 10 -101.67 -85.44 REMARK 500 18 LEU A 16 104.50 -50.18 REMARK 500 18 ASP A 32 73.76 52.23 REMARK 500 18 LYS A 42 110.46 61.67 REMARK 500 18 ASN A 74 70.83 54.35 REMARK 500 18 SER A 101 43.65 177.86 REMARK 500 18 GLU A 102 -67.99 -97.95 REMARK 500 18 HIS A 105 93.32 -43.64 REMARK 500 18 LYS A 106 -39.09 -179.99 REMARK 500 19 HIS A 3 -90.28 58.27 REMARK 500 19 MET A 4 175.47 61.02 REMARK 500 19 ASP A 8 40.62 -166.06 REMARK 500 19 ASN A 9 -101.53 57.18 REMARK 500 19 THR A 10 86.68 47.04 REMARK 500 19 LYS A 42 93.80 58.74 REMARK 500 19 ARG A 59 -152.41 55.01 REMARK 500 19 SER A 101 170.28 -50.75 REMARK 500 19 LEU A 104 42.37 -85.55 REMARK 500 19 LYS A 106 -36.30 -156.29 REMARK 500 20 SER A 2 30.11 -90.51 REMARK 500 20 HIS A 6 99.21 59.33 REMARK 500 20 LEU A 7 -159.37 59.17 REMARK 500 20 ASP A 8 91.82 58.60 REMARK 500 20 THR A 10 -115.40 -106.26 REMARK 500 20 LYS A 42 96.18 58.60 REMARK 500 20 TYR A 73 32.27 -143.71 REMARK 500 20 ASN A 74 -23.94 75.68 REMARK 500 20 HIS A 75 -136.60 37.17 REMARK 500 20 THR A 76 151.66 80.36 REMARK 500 20 ASP A 98 2.68 -67.63 REMARK 500 20 SER A 101 -56.98 178.84 REMARK 500 20 HIS A 105 76.77 -69.27 REMARK 500 20 LYS A 106 -8.40 -178.48 REMARK 500 20 TYR A 107 7.68 -150.71 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1YGO A 5 110 UNP Q05652 KPEL_DROME 26 131
SEQADV 1YGO GLY A 1 UNP Q05652 CLONING ARTIFACT SEQADV 1YGO SER A 2 UNP Q05652 CLONING ARTIFACT SEQADV 1YGO HIS A 3 UNP Q05652 CLONING ARTIFACT SEQADV 1YGO MET A 4 UNP Q05652 CLONING ARTIFACT
SEQRES 1 A 110 GLY SER HIS MET SER HIS LEU ASP ASN THR MET ALA ILE SEQRES 2 A 110 ARG LEU LEU PRO LEU PRO VAL ARG ALA GLN LEU CYS ALA SEQRES 3 A 110 HIS LEU ASP ALA LEU ASP VAL TRP GLN GLN LEU ALA THR SEQRES 4 A 110 ALA VAL LYS LEU TYR PRO ASP GLN VAL GLU GLN ILE SER SEQRES 5 A 110 SER GLN LYS GLN ARG GLY ARG SER ALA SER ASN GLU PHE SEQRES 6 A 110 LEU ASN ILE TRP GLY GLY GLN TYR ASN HIS THR VAL GLN SEQRES 7 A 110 THR LEU PHE ALA LEU PHE LYS LYS LEU LYS LEU HIS ASN SEQRES 8 A 110 ALA MET ARG LEU ILE LYS ASP TYR VAL SER GLU ASP LEU SEQRES 9 A 110 HIS LYS TYR ILE PRO ARG
HELIX 1 1 PRO A 17 ASP A 32 1 16 HELIX 2 2 TRP A 34 THR A 39 1 6 HELIX 3 3 ALA A 40 LYS A 42 5 3 HELIX 4 4 TYR A 44 ARG A 57 1 14 HELIX 5 5 SER A 60 GLY A 70 1 11 HELIX 6 6 THR A 76 LYS A 85 1 10 HELIX 7 7 LEU A 89 ILE A 96 1 8 HELIX 8 8 SER A 101 HIS A 105 5 5
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000