10 20 30 40 50 60 70 80 1YEL - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-DEC-04 1YEL
TITLE STRUCTURE OF THE HYPOTHETICAL ARABIDOPSIS THALIANA PROTEIN TITLE 2 AT1G16640.1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: AT1G16640; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 1-102; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SG13009[PREP4]; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30
KEYWDS CESG, PROTEIN STRUCTURE INITIATIVE, STRUCTURAL GENOMICS, KEYWDS 2 PSI, CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, UNKNOWN KEYWDS 3 FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR F.C.PETERSON,J.K.WALTNER,B.L.LYTLE,B.F.VOLKMAN,CENTER FOR AUTHOR 2 EUKARYOTIC STRUCTURAL GENOMICS (CESG)
REVDAT 5 24-FEB-09 1YEL 1 VERSN REVDAT 4 12-FEB-08 1YEL 1 REMARK REVDAT 3 13-SEP-05 1YEL 1 JRNL REVDAT 2 30-AUG-05 1YEL 1 JRNL REVDAT 1 18-JAN-05 1YEL 0
JRNL AUTH J.K.WALTNER,F.C.PETERSON,B.L.LYTLE,B.F.VOLKMAN JRNL TITL STRUCTURE OF THE B3 DOMAIN FROM ARABIDOPSIS JRNL TITL 2 THALIANA PROTEIN AT1G16640 JRNL REF PROTEIN SCI. V. 14 2478 2005 JRNL REFN ISSN 0961-8368 JRNL PMID 16081658 JRNL DOI 10.1110/PS.051606305
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : G. MARIUS CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 1294 NOE RESTRAINTS (241 INTRA, 301 SEQUENTIAL, 193 MEDIUM, REMARK 3 AND 559 LONG RANGE), AND 144 PHI AND PSI DIHEDRAL ANGLE REMARK 3 CONSTRAINTS.
REMARK 4 REMARK 4 1YEL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-DEC-04. REMARK 100 THE RCSB ID CODE IS RCSB031428.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 70 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8 MM AT1G16640 U-15N,13C, REMARK 210 20 MM PO4, 50 MM NACL, 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, 3D 13C- REMARK 210 SEPARATED NOESY (AROMATIC) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 2004, REMARK 210 SPSCAN, XEASY 1.3, GARANT 2.1, REMARK 210 CYANA 1.0.6 REMARK 210 METHOD USED : AUTOMATED METHODS WERE USED REMARK 210 FOR BACKBONE CHEMICAL SHIFT REMARK 210 ASSIGNMENT AND ITERATIVE NOE REMARK 210 REFINEMENT. FINAL STRUCTURES REMARK 210 WERE OBTAINED BY MOLECULAR REMARK 210 DYNAMICS IN EXPLICIT SOLVENT. REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: ALL TRIPLE-RESONANCE AND NOESY SPECTRA WERE ACQUIRED REMARK 210 USING A CRYOGENIC PROBE.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 64 -98.70 -94.49 REMARK 500 1 ASN A 75 90.96 60.11 REMARK 500 1 ASP A 87 -97.47 -88.37 REMARK 500 1 ARG A 88 20.27 -154.11 REMARK 500 1 ASP A 89 -154.61 -143.56 REMARK 500 1 HIS A 99 -42.37 170.89 REMARK 500 1 ASN A 100 -32.08 -177.51 REMARK 500 2 THR A 4 -72.91 -74.79 REMARK 500 2 THR A 64 -150.52 -85.21 REMARK 500 2 ASN A 75 94.89 57.80 REMARK 500 2 ARG A 90 41.74 -95.52 REMARK 500 3 ALA A 2 89.51 63.40 REMARK 500 3 GLU A 6 93.85 -61.38 REMARK 500 3 LYS A 20 -33.35 -134.55 REMARK 500 3 PHE A 32 95.94 -167.74 REMARK 500 3 THR A 64 -142.73 -101.31 REMARK 500 3 ASN A 75 82.81 55.63 REMARK 500 3 ASP A 87 -79.92 -96.31 REMARK 500 3 ARG A 88 16.49 -143.42 REMARK 500 3 HIS A 99 -48.46 -144.08 REMARK 500 3 MET A 101 -44.94 169.83 REMARK 500 4 SER A 15 -9.46 -58.38 REMARK 500 4 PHE A 32 103.24 -168.54 REMARK 500 4 THR A 64 -144.38 -99.16 REMARK 500 4 ASN A 75 92.38 56.22 REMARK 500 4 ASP A 89 -159.36 -106.08 REMARK 500 4 HIS A 99 -74.88 65.51 REMARK 500 4 ASN A 100 85.65 -169.68 REMARK 500 5 ASP A 3 78.39 68.42 REMARK 500 5 LYS A 20 -36.17 -136.22 REMARK 500 5 THR A 64 -103.65 -95.03 REMARK 500 5 ASN A 75 83.92 54.82 REMARK 500 5 ARG A 88 80.40 63.75 REMARK 500 5 ASP A 89 -168.67 -172.82 REMARK 500 6 ASP A 3 149.29 71.08 REMARK 500 6 THR A 64 -92.16 -90.00 REMARK 500 6 ASN A 75 82.75 60.77 REMARK 500 6 ASP A 87 -78.78 -81.79 REMARK 500 6 ARG A 88 24.23 -176.82 REMARK 500 6 HIS A 99 125.90 68.04 REMARK 500 7 GLU A 6 80.95 42.76 REMARK 500 7 PHE A 32 80.45 -161.35 REMARK 500 7 THR A 64 -144.55 -96.43 REMARK 500 7 ASN A 75 94.86 53.99 REMARK 500 7 ASP A 89 -159.63 -96.35 REMARK 500 7 ASN A 100 100.79 -160.08 REMARK 500 8 THR A 64 -141.53 -78.21 REMARK 500 8 ASN A 75 83.82 56.74 REMARK 500 8 ARG A 88 -0.05 84.47 REMARK 500 8 ASP A 89 -165.18 -101.13 REMARK 500 9 THR A 4 -62.54 -95.21 REMARK 500 9 ILE A 38 -62.49 -90.19 REMARK 500 9 THR A 64 -106.49 -94.01 REMARK 500 9 ASN A 75 95.18 64.18 REMARK 500 9 ARG A 88 81.31 72.24 REMARK 500 9 ASP A 89 -160.75 -179.20 REMARK 500 9 ASN A 100 113.76 171.86 REMARK 500 10 THR A 64 -127.01 -87.54 REMARK 500 10 ASN A 75 89.40 50.98 REMARK 500 10 ASP A 89 -162.43 -102.15 REMARK 500 10 ARG A 90 36.31 -94.94 REMARK 500 10 ASN A 100 -58.69 -175.72 REMARK 500 10 MET A 101 -53.22 -166.48 REMARK 500 11 THR A 64 -155.23 -72.56 REMARK 500 11 ASN A 75 90.30 65.61 REMARK 500 11 ASP A 87 -161.52 -105.59 REMARK 500 11 ASP A 89 -162.91 -102.87 REMARK 500 11 MET A 101 -39.27 178.11 REMARK 500 12 ALA A 2 -166.53 -121.34 REMARK 500 12 GLU A 6 77.84 53.34 REMARK 500 12 THR A 64 -152.25 -79.68 REMARK 500 12 ASN A 75 79.87 55.29 REMARK 500 12 ARG A 88 89.07 -66.46 REMARK 500 12 ASP A 89 -157.81 -165.36 REMARK 500 12 ASN A 100 113.54 67.84 REMARK 500 13 ALA A 2 81.12 56.48 REMARK 500 13 ASP A 3 87.66 65.04 REMARK 500 13 GLU A 6 85.64 60.84 REMARK 500 13 THR A 64 -164.49 -66.11 REMARK 500 13 ASN A 75 80.10 42.22 REMARK 500 13 ARG A 88 81.94 70.08 REMARK 500 13 ASP A 89 -155.24 -177.26 REMARK 500 14 LYS A 20 -2.05 -144.38 REMARK 500 14 THR A 64 -98.47 -103.49 REMARK 500 14 ASN A 75 72.70 46.35 REMARK 500 14 ASP A 87 -100.20 -84.07 REMARK 500 14 ARG A 88 16.50 -150.43 REMARK 500 14 ARG A 90 32.08 -95.91 REMARK 500 14 HIS A 99 79.05 -108.49 REMARK 500 15 ALA A 2 -169.02 60.88 REMARK 500 15 THR A 64 -153.82 -79.30 REMARK 500 15 ASN A 75 95.35 54.11 REMARK 500 15 ASP A 89 -150.74 -89.27 REMARK 500 15 HIS A 99 98.39 66.84 REMARK 500 16 PHE A 32 87.16 -160.57 REMARK 500 16 THR A 64 -154.45 -86.15 REMARK 500 16 ASN A 75 82.45 49.13 REMARK 500 16 ARG A 88 83.28 -66.08 REMARK 500 16 ASP A 89 -148.71 173.54 REMARK 500 16 HIS A 99 82.82 77.36 REMARK 500 17 LYS A 20 -33.91 -141.63 REMARK 500 17 THR A 64 -163.67 -71.73 REMARK 500 17 ASN A 75 88.70 54.22 REMARK 500 17 ARG A 88 96.65 -65.01 REMARK 500 17 ASP A 89 -159.43 179.27 REMARK 500 18 THR A 4 -59.01 -124.46 REMARK 500 18 ASN A 75 83.53 50.87 REMARK 500 18 ASP A 87 -78.75 -81.16 REMARK 500 18 ARG A 88 24.32 -162.23 REMARK 500 18 ASP A 89 -168.93 -120.55 REMARK 500 19 GLU A 6 114.25 -179.67 REMARK 500 19 PHE A 32 100.50 -173.40 REMARK 500 19 THR A 64 -157.38 -78.94 REMARK 500 19 ASN A 75 88.73 47.65 REMARK 500 19 ARG A 88 93.90 -54.17 REMARK 500 19 ASP A 89 -159.04 -174.64 REMARK 500 19 HIS A 99 83.08 56.51 REMARK 500 19 ASN A 100 -48.29 -169.41 REMARK 500 19 MET A 101 67.31 -118.21 REMARK 500 20 THR A 4 -43.96 -157.93 REMARK 500 20 LYS A 20 -35.97 -135.25 REMARK 500 20 PHE A 32 114.67 -172.87 REMARK 500 20 THR A 64 -144.55 -89.48 REMARK 500 20 ASN A 75 96.13 57.73 REMARK 500 20 ARG A 88 72.70 62.12 REMARK 500 20 ASP A 89 -171.49 -175.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 15 ARG A 53 0.08 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.33931 RELATED DB: TARGETDB
DBREF 1YEL A 1 102 UNP Q9FX77 Q9FX77_ARATH 1 102
SEQADV 1YEL GLY A -1 UNP Q9FX77 CLONING ARTIFACT SEQADV 1YEL SER A 0 UNP Q9FX77 CLONING ARTIFACT
SEQRES 1 A 104 GLY SER MET ALA ASP THR GLY GLU VAL GLN PHE MET LYS SEQRES 2 A 104 PRO PHE ILE SER GLU LYS SER SER LYS SER LEU GLU ILE SEQRES 3 A 104 PRO LEU GLY PHE ASN GLU TYR PHE PRO ALA PRO PHE PRO SEQRES 4 A 104 ILE THR VAL ASP LEU LEU ASP TYR SER GLY ARG SER TRP SEQRES 5 A 104 THR VAL ARG MET LYS LYS ARG GLY GLU LYS VAL PHE LEU SEQRES 6 A 104 THR VAL GLY TRP GLU ASN PHE VAL LYS ASP ASN ASN LEU SEQRES 7 A 104 GLU ASP GLY LYS TYR LEU GLN PHE ILE TYR ASP ARG ASP SEQRES 8 A 104 ARG THR PHE TYR VAL ILE ILE TYR GLY HIS ASN MET CYS
HELIX 1 1 PRO A 25 GLU A 30 1 6 HELIX 2 2 GLY A 66 ASN A 75 1 10
SHEET 1 A 7 VAL A 7 PRO A 12 0 SHEET 2 A 7 TYR A 81 TYR A 86 -1 O TYR A 86 N VAL A 7 SHEET 3 A 7 THR A 91 ILE A 96 -1 O ILE A 95 N GLN A 83 SHEET 4 A 7 THR A 39 LEU A 43 1 N LEU A 43 O VAL A 94 SHEET 5 A 7 SER A 49 ARG A 57 -1 O TRP A 50 N LEU A 42 SHEET 6 A 7 LYS A 60 LEU A 63 -1 O PHE A 62 N LYS A 55 SHEET 7 A 7 LEU A 22 GLU A 23 -1 N LEU A 22 O LEU A 63
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000