10 20 30 40 50 60 70 80 1Y1P - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 19-NOV-04 1Y1P
TITLE X-RAY STRUCTURE OF ALDEHYDE REDUCTASE WITH NADPH
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDEHYDE REDUCTASE II; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ARII; COMPND 5 EC: 1.1.1.2; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPORIDIOBOLUS SALMONICOLOR; SOURCE 3 ORGANISM_TAXID: 5005; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PUCAR2
KEYWDS ROSSMANN FOLD, SHORT CHAIN DEHYDROGENASE REDUCTASE, KEYWDS 2 OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR S.KAMITORI,K.KITA
REVDAT 3 24-FEB-09 1Y1P 1 VERSN REVDAT 2 13-SEP-05 1Y1P 1 JRNL REVDAT 1 06-SEP-05 1Y1P 0
JRNL AUTH S.KAMITORI,A.IGUCHI,A.OHTAKI,M.YAMADA,K.KITA JRNL TITL X-RAY STRUCTURES OF NADPH-DEPENDENT CARBONYL JRNL TITL 2 REDUCTASE FROM SPOROBOLOMYCES SALMONICOLOR PROVIDE JRNL TITL 3 INSIGHTS INTO STEREOSELECTIVE REDUCTIONS OF JRNL TITL 4 CARBONYL COMPOUNDS JRNL REF J.MOL.BIOL. V. 352 551 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 16095619 JRNL DOI 10.1016/J.JMB.2005.07.011
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : CNS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2192638.410 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 84533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 8508 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 13427 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1516 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.007 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5251 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 733 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.04000 REMARK 3 B22 (A**2) : -1.10000 REMARK 3 B33 (A**2) : -2.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : 0.08 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.12 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.79 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.110 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.680 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.800 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.560 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 42.79 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : NADPH.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NADPH.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1Y1P COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-NOV-04. REMARK 100 THE RCSB ID CODE IS RCSB031004.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-03; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY; PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A; AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 0.9789 REMARK 200 MONOCHROMATOR : GRAPHITE; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84533 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 74.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% (W/V) POLYETHYLENE GLYCOL 2000 REMARK 280 MME, 100MM AMMONIUM SULFATE AND 200MM SODIUM ACETATE, PH 5.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.50000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.16200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.69550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.16200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.50000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.69550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 2 CB
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 70 O HOH B 2352 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 104 -55.32 -121.31 REMARK 500 SER A 132 -140.03 -102.40 REMARK 500 HIS A 198 45.22 -85.45 REMARK 500 ASN A 207 -135.09 -104.77 REMARK 500 SER A 222 -143.98 52.97 REMARK 500 GLN A 245 -157.20 -163.61 REMARK 500 VAL B 95 35.87 -142.93 REMARK 500 TYR B 101 -84.00 -50.15 REMARK 500 SER B 132 -140.37 -106.43 REMARK 500 ASP B 150 -168.70 -119.39 REMARK 500 LYS B 196 70.98 31.58 REMARK 500 ASN B 207 -118.46 -102.82 REMARK 500 GLN B 245 -157.02 -164.10 REMARK 500 REMARK 500 REMARK: NULL
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 AMP A 1002 REMARK 610 PO4 A 1003 REMARK 610 AMP B 2002 REMARK 610 PO4 B 2003
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 801 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 802 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 803 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NMN A 1001 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 1002 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1003 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NMN B 2001 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP B 2002 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2003
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UJM RELATED DB: PDB REMARK 900 ALDEHYDE REDUCTASE IN APO-FORM
DBREF 1Y1P A 2 343 UNP Q9UUN9 ALD2_SPOSA 1 342 DBREF 1Y1P B 2 343 UNP Q9UUN9 ALD2_SPOSA 1 342
SEQRES 1 A 342 ALA LYS ILE ASP ASN ALA VAL LEU PRO GLU GLY SER LEU SEQRES 2 A 342 VAL LEU VAL THR GLY ALA ASN GLY PHE VAL ALA SER HIS SEQRES 3 A 342 VAL VAL GLU GLN LEU LEU GLU HIS GLY TYR LYS VAL ARG SEQRES 4 A 342 GLY THR ALA ARG SER ALA SER LYS LEU ALA ASN LEU GLN SEQRES 5 A 342 LYS ARG TRP ASP ALA LYS TYR PRO GLY ARG PHE GLU THR SEQRES 6 A 342 ALA VAL VAL GLU ASP MET LEU LYS GLN GLY ALA TYR ASP SEQRES 7 A 342 GLU VAL ILE LYS GLY ALA ALA GLY VAL ALA HIS ILE ALA SEQRES 8 A 342 SER VAL VAL SER PHE SER ASN LYS TYR ASP GLU VAL VAL SEQRES 9 A 342 THR PRO ALA ILE GLY GLY THR LEU ASN ALA LEU ARG ALA SEQRES 10 A 342 ALA ALA ALA THR PRO SER VAL LYS ARG PHE VAL LEU THR SEQRES 11 A 342 SER SER THR VAL SER ALA LEU ILE PRO LYS PRO ASN VAL SEQRES 12 A 342 GLU GLY ILE TYR LEU ASP GLU LYS SER TRP ASN LEU GLU SEQRES 13 A 342 SER ILE ASP LYS ALA LYS THR LEU PRO GLU SER ASP PRO SEQRES 14 A 342 GLN LYS SER LEU TRP VAL TYR ALA ALA SER LYS THR GLU SEQRES 15 A 342 ALA GLU LEU ALA ALA TRP LYS PHE MET ASP GLU ASN LYS SEQRES 16 A 342 PRO HIS PHE THR LEU ASN ALA VAL LEU PRO ASN TYR THR SEQRES 17 A 342 ILE GLY THR ILE PHE ASP PRO GLU THR GLN SER GLY SER SEQRES 18 A 342 THR SER GLY TRP MET MET SER LEU PHE ASN GLY GLU VAL SEQRES 19 A 342 SER PRO ALA LEU ALA LEU MET PRO PRO GLN TYR TYR VAL SEQRES 20 A 342 SER ALA VAL ASP ILE GLY LEU LEU HIS LEU GLY CYS LEU SEQRES 21 A 342 VAL LEU PRO GLN ILE GLU ARG ARG ARG VAL TYR GLY THR SEQRES 22 A 342 ALA GLY THR PHE ASP TRP ASN THR VAL LEU ALA THR PHE SEQRES 23 A 342 ARG LYS LEU TYR PRO SER LYS THR PHE PRO ALA ASP PHE SEQRES 24 A 342 PRO ASP GLN GLY GLN ASP LEU SER LYS PHE ASP THR ALA SEQRES 25 A 342 PRO SER LEU GLU ILE LEU LYS SER LEU GLY ARG PRO GLY SEQRES 26 A 342 TRP ARG SER ILE GLU GLU SER ILE LYS ASP LEU VAL GLY SEQRES 27 A 342 SER GLU THR ALA SEQRES 1 B 342 ALA LYS ILE ASP ASN ALA VAL LEU PRO GLU GLY SER LEU SEQRES 2 B 342 VAL LEU VAL THR GLY ALA ASN GLY PHE VAL ALA SER HIS SEQRES 3 B 342 VAL VAL GLU GLN LEU LEU GLU HIS GLY TYR LYS VAL ARG SEQRES 4 B 342 GLY THR ALA ARG SER ALA SER LYS LEU ALA ASN LEU GLN SEQRES 5 B 342 LYS ARG TRP ASP ALA LYS TYR PRO GLY ARG PHE GLU THR SEQRES 6 B 342 ALA VAL VAL GLU ASP MET LEU LYS GLN GLY ALA TYR ASP SEQRES 7 B 342 GLU VAL ILE LYS GLY ALA ALA GLY VAL ALA HIS ILE ALA SEQRES 8 B 342 SER VAL VAL SER PHE SER ASN LYS TYR ASP GLU VAL VAL SEQRES 9 B 342 THR PRO ALA ILE GLY GLY THR LEU ASN ALA LEU ARG ALA SEQRES 10 B 342 ALA ALA ALA THR PRO SER VAL LYS ARG PHE VAL LEU THR SEQRES 11 B 342 SER SER THR VAL SER ALA LEU ILE PRO LYS PRO ASN VAL SEQRES 12 B 342 GLU GLY ILE TYR LEU ASP GLU LYS SER TRP ASN LEU GLU SEQRES 13 B 342 SER ILE ASP LYS ALA LYS THR LEU PRO GLU SER ASP PRO SEQRES 14 B 342 GLN LYS SER LEU TRP VAL TYR ALA ALA SER LYS THR GLU SEQRES 15 B 342 ALA GLU LEU ALA ALA TRP LYS PHE MET ASP GLU ASN LYS SEQRES 16 B 342 PRO HIS PHE THR LEU ASN ALA VAL LEU PRO ASN TYR THR SEQRES 17 B 342 ILE GLY THR ILE PHE ASP PRO GLU THR GLN SER GLY SER SEQRES 18 B 342 THR SER GLY TRP MET MET SER LEU PHE ASN GLY GLU VAL SEQRES 19 B 342 SER PRO ALA LEU ALA LEU MET PRO PRO GLN TYR TYR VAL SEQRES 20 B 342 SER ALA VAL ASP ILE GLY LEU LEU HIS LEU GLY CYS LEU SEQRES 21 B 342 VAL LEU PRO GLN ILE GLU ARG ARG ARG VAL TYR GLY THR SEQRES 22 B 342 ALA GLY THR PHE ASP TRP ASN THR VAL LEU ALA THR PHE SEQRES 23 B 342 ARG LYS LEU TYR PRO SER LYS THR PHE PRO ALA ASP PHE SEQRES 24 B 342 PRO ASP GLN GLY GLN ASP LEU SER LYS PHE ASP THR ALA SEQRES 25 B 342 PRO SER LEU GLU ILE LEU LYS SER LEU GLY ARG PRO GLY SEQRES 26 B 342 TRP ARG SER ILE GLU GLU SER ILE LYS ASP LEU VAL GLY SEQRES 27 B 342 SER GLU THR ALA
HET SO4 A 801 5 HET SO4 B 802 5 HET ACT A 803 4 HET NMN A1001 22 HET AMP A1002 22 HET PO4 A1003 4 HET NMN B2001 22 HET AMP B2002 22 HET PO4 B2003 4
HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM NMN BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM PO4 PHOSPHATE ION
HETSYN NMN NICOTINAMIDE MONONUCLEOTIDE
FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 NMN 2(C11 H16 N2 O8 P 1+) FORMUL 6 AMP 2(C10 H14 N5 O7 P) FORMUL 6 PO4 2(O4 P 3-) FORMUL 8 HOH *733(H2 O)
HELIX 1 1 GLY A 22 HIS A 35 1 14 HELIX 2 2 SER A 45 TYR A 60 1 16 HELIX 3 3 LYS A 100 ALA A 121 1 22 HELIX 4 4 SER A 133 ALA A 137 5 5 HELIX 5 5 ASN A 155 LEU A 165 1 11 HELIX 6 6 GLN A 171 LYS A 196 1 26 HELIX 7 7 GLY A 221 ASN A 232 1 12 HELIX 8 8 SER A 236 LEU A 241 1 6 HELIX 9 9 ALA A 250 LEU A 263 1 14 HELIX 10 10 ASP A 279 TYR A 291 1 13 HELIX 11 11 THR A 312 LEU A 322 1 11 HELIX 12 12 SER A 329 GLY A 339 1 11 HELIX 13 13 GLY B 22 HIS B 35 1 14 HELIX 14 14 ALA B 46 LYS B 48 5 3 HELIX 15 15 LEU B 49 TYR B 60 1 12 HELIX 16 16 TYR B 101 ALA B 121 1 21 HELIX 17 17 SER B 133 ALA B 137 5 5 HELIX 18 18 ASN B 155 LEU B 165 1 11 HELIX 19 19 GLN B 171 LYS B 196 1 26 HELIX 20 20 ASP B 215 SER B 220 1 6 HELIX 21 21 SER B 222 ASN B 232 1 11 HELIX 22 22 SER B 236 LEU B 241 1 6 HELIX 23 23 ALA B 250 LEU B 263 1 14 HELIX 24 24 ASP B 279 TYR B 291 1 13 HELIX 25 25 THR B 312 LEU B 322 1 11 HELIX 26 26 SER B 329 GLY B 339 1 11
SHEET 1 A 7 PHE A 64 VAL A 68 0 SHEET 2 A 7 LYS A 38 ALA A 43 1 N GLY A 41 O ALA A 67 SHEET 3 A 7 LEU A 14 THR A 18 1 N VAL A 15 O LYS A 38 SHEET 4 A 7 GLY A 87 HIS A 90 1 O ALA A 89 N LEU A 16 SHEET 5 A 7 ARG A 127 THR A 131 1 O VAL A 129 N VAL A 88 SHEET 6 A 7 THR A 200 PRO A 206 1 O THR A 200 N PHE A 128 SHEET 7 A 7 ARG A 270 GLY A 273 1 O VAL A 271 N LEU A 205 SHEET 1 B 2 TYR A 148 LEU A 149 0 SHEET 2 B 2 LYS A 309 PHE A 310 1 O LYS A 309 N LEU A 149 SHEET 1 C 3 TYR A 208 ILE A 210 0 SHEET 2 C 3 GLN A 245 SER A 249 1 O VAL A 248 N ILE A 210 SHEET 3 C 3 GLY A 276 PHE A 278 -1 O GLY A 276 N TYR A 247 SHEET 1 D 7 PHE B 64 VAL B 68 0 SHEET 2 D 7 LYS B 38 ALA B 43 1 N GLY B 41 O ALA B 67 SHEET 3 D 7 LEU B 14 THR B 18 1 N VAL B 17 O THR B 42 SHEET 4 D 7 ALA B 85 HIS B 90 1 O ALA B 86 N LEU B 14 SHEET 5 D 7 ARG B 127 THR B 131 1 O VAL B 129 N VAL B 88 SHEET 6 D 7 THR B 200 PRO B 206 1 O ASN B 202 N LEU B 130 SHEET 7 D 7 ARG B 270 GLY B 273 1 O VAL B 271 N ALA B 203 SHEET 1 E 2 TYR B 148 LEU B 149 0 SHEET 2 E 2 LYS B 309 PHE B 310 1 O LYS B 309 N LEU B 149 SHEET 1 F 3 TYR B 208 ILE B 210 0 SHEET 2 F 3 GLN B 245 SER B 249 1 O VAL B 248 N ILE B 210 SHEET 3 F 3 GLY B 276 PHE B 278 -1 O GLY B 276 N TYR B 247
LINK O3P NMN A1001 P AMP A1002 1555 1555 1.52 LINK O2' AMP A1002 P PO4 A1003 1555 1555 1.61 LINK O3P NMN B2001 P AMP B2002 1555 1555 1.49 LINK O2' AMP B2002 P PO4 B2003 1555 1555 1.61
SITE 1 AC1 4 ARG A 324 ARG A 328 HOH A1068 HOH A1107 SITE 1 AC2 5 ARG B 324 ARG B 328 HOH B2038 HOH B2189 SITE 2 AC2 5 HOH B2318 SITE 1 AC3 7 HIS A 27 GLU A 30 GLN A 31 PHE A 214 SITE 2 AC3 7 HOH A1099 HOH A1175 HOH A1253 SITE 1 AC4 17 PHE A 23 VAL A 24 ILE A 91 SER A 93 SITE 2 AC4 17 THR A 131 SER A 132 SER A 133 TYR A 177 SITE 3 AC4 17 LYS A 181 PRO A 206 ASN A 207 THR A 209 SITE 4 AC4 17 SER A 222 THR A 223 AMP A1002 HOH A1019 SITE 5 AC4 17 HOH A1129 SITE 1 AC5 21 GLY A 19 ASN A 21 GLY A 22 PHE A 23 SITE 2 AC5 21 ARG A 44 MET A 72 ALA A 92 SER A 93 SITE 3 AC5 21 VAL A 95 SER A 222 NMN A1001 PO4 A1003 SITE 4 AC5 21 HOH A1031 HOH A1032 HOH A1063 HOH A1067 SITE 5 AC5 21 HOH A1084 HOH A1086 HOH A1129 HOH A1156 SITE 6 AC5 21 HOH A1179 SITE 1 AC6 8 ASN A 21 ARG A 44 LYS A 48 AMP A1002 SITE 2 AC6 8 HOH A1031 HOH A1152 HOH A1157 HOH A1341 SITE 1 AC7 16 GLY B 22 PHE B 23 VAL B 24 SER B 93 SITE 2 AC7 16 THR B 131 SER B 132 SER B 133 TYR B 177 SITE 3 AC7 16 LYS B 181 PRO B 206 ASN B 207 THR B 209 SITE 4 AC7 16 THR B 223 AMP B2002 HOH B2089 HOH B2319 SITE 1 AC8 11 ASN B 21 GLY B 22 PHE B 23 ARG B 44 SITE 2 AC8 11 MET B 72 SER B 93 VAL B 94 NMN B2001 SITE 3 AC8 11 PO4 B2003 HOH B2125 HOH B2348 SITE 1 AC9 4 ASN B 21 LYS B 48 AMP B2002 HOH B2187
CRYST1 55.000 83.391 148.324 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.018182 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011992 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006742 0.00000