10 20 30 40 50 60 70 80 1XYK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER UNKNOWN FUNCTION 10-NOV-04 1XYK
TITLE NMR STRUCTURE OF THE CANINE PRION PROTEIN
CAVEAT 1XYK CHIRALITY ERROR AT CA CENTER OF TYR 157 IN MODEL 14
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CPRP C-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANIS LUPUS FAMILIARIS; SOURCE 3 ORGANISM_COMMON: DOG; SOURCE 4 ORGANISM_TAXID: 9615; SOURCE 5 STRAIN: FAMILIARIS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21
KEYWDS NMR, PRP, PRION, PRNP, CPRP, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR D.A.LYSEK,C.SCHORN,V.ESTEVE-MOYA,T.HERRMANN,K.WUTHRICH
REVDAT 4 24-FEB-09 1XYK 1 VERSN REVDAT 3 25-JAN-05 1XYK 1 JRNL REVDAT 2 11-JAN-05 1XYK 1 AUTHOR JRNL REVDAT 1 04-JAN-05 1XYK 0
JRNL AUTH D.A.LYSEK,C.SCHORN,L.G.NIVON,V.ESTEVE-MOYA, JRNL AUTH 2 B.CHRISTEN,L.CALZOLAI,C.VON SCHROETTER,F.FIORITO, JRNL AUTH 3 T.HERRMANN,P.GUNTERT,K.WUTHRICH JRNL TITL PRION PROTEIN NMR STRUCTURES OF CATS, DOGS, PIGS, JRNL TITL 2 AND SHEEP JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 640 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 15647367 JRNL DOI 10.1073/PNAS.0408937102
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CANDID 1.0, ATNOS 1.0 REMARK 3 AUTHORS : HERRMANN (CANDID), HERRMANN (ATNOS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1XYK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-NOV-04. REMARK 100 THE RCSB ID CODE IS RCSB030911.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : 10 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM CPRP U-15N, 13C; 10MM REMARK 210 ACETATE REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 6.2 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 3D REMARK 210 TECHNIQUES
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 3 TYR A 155 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 3 TYR A 157 CB - CA - C ANGL. DEV. = 14.0 DEGREES REMARK 500 3 TYR A 157 CB - CG - CD1 ANGL. DEV. = -4.8 DEGREES REMARK 500 5 TYR A 157 CB - CA - C ANGL. DEV. = 12.2 DEGREES REMARK 500 10 TYR A 157 CB - CG - CD1 ANGL. DEV. = -4.9 DEGREES REMARK 500 14 TYR A 157 CB - CA - C ANGL. DEV. = 19.9 DEGREES REMARK 500 15 LEU A 125 CB - CA - C ANGL. DEV. = 12.8 DEGREES REMARK 500 15 ARG A 151 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 17 ARG A 151 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 122 115.15 -160.95 REMARK 500 1 MET A 129 -166.85 -79.50 REMARK 500 1 ASN A 153 22.46 -149.22 REMARK 500 1 ASP A 167 -161.72 66.37 REMARK 500 1 GLN A 168 -81.73 29.61 REMARK 500 1 SER A 170 -85.28 53.56 REMARK 500 1 GLN A 172 -91.84 -84.43 REMARK 500 1 ASN A 173 -58.31 -121.37 REMARK 500 1 GLU A 221 -31.30 -138.13 REMARK 500 1 TYR A 225 -75.01 -87.33 REMARK 500 1 GLN A 227 -177.38 56.78 REMARK 500 2 MET A 134 -155.14 -83.10 REMARK 500 2 TYR A 163 -169.40 -120.60 REMARK 500 2 PRO A 165 72.11 -67.05 REMARK 500 2 ASP A 167 71.69 34.57 REMARK 500 2 GLN A 168 -20.20 -157.26 REMARK 500 2 GLN A 172 -111.54 -131.73 REMARK 500 2 ASN A 173 -68.80 -121.80 REMARK 500 2 LYS A 194 -106.15 -101.53 REMARK 500 2 TYR A 225 -71.64 -120.53 REMARK 500 2 GLN A 227 175.41 60.80 REMARK 500 2 ARG A 228 -175.85 -172.28 REMARK 500 2 ALA A 230 63.71 95.93 REMARK 500 3 TYR A 128 -144.38 39.40 REMARK 500 3 PRO A 137 -176.31 -68.88 REMARK 500 3 GLN A 168 -11.14 -150.75 REMARK 500 3 SER A 170 81.39 28.61 REMARK 500 3 ASN A 171 71.84 56.25 REMARK 500 3 GLN A 172 -105.95 -104.04 REMARK 500 3 ASN A 173 -69.44 -121.07 REMARK 500 3 PHE A 175 -79.50 22.97 REMARK 500 3 GLN A 227 82.16 44.02 REMARK 500 4 VAL A 122 87.20 -157.58 REMARK 500 4 ASN A 143 175.10 -57.45 REMARK 500 4 ASN A 153 29.29 -157.33 REMARK 500 4 VAL A 166 -57.41 -120.51 REMARK 500 4 ASP A 167 82.24 32.35 REMARK 500 4 SER A 170 -123.87 39.46 REMARK 500 4 ASN A 171 47.16 -109.46 REMARK 500 4 GLN A 172 -102.83 -72.78 REMARK 500 4 ASN A 173 -56.76 -122.09 REMARK 500 4 ALA A 224 4.16 -69.53 REMARK 500 4 TYR A 225 -77.03 -120.59 REMARK 500 4 GLN A 227 -165.92 53.22 REMARK 500 5 MET A 134 -155.55 -84.84 REMARK 500 5 ARG A 136 101.94 -33.73 REMARK 500 5 ASN A 143 -173.71 -69.90 REMARK 500 5 TYR A 155 5.61 -65.72 REMARK 500 5 SER A 170 87.97 -52.05 REMARK 500 5 GLN A 172 -117.39 -78.86 REMARK 500 5 ASN A 173 -69.25 -124.68 REMARK 500 5 GLN A 186 1.28 -65.53 REMARK 500 5 GLU A 221 -50.96 -161.88 REMARK 500 5 SER A 222 -72.26 -45.18 REMARK 500 5 ARG A 228 131.87 62.07 REMARK 500 5 ALA A 230 65.12 -157.68 REMARK 500 6 ASN A 153 49.70 -161.79 REMARK 500 6 GLN A 168 -52.58 -147.87 REMARK 500 6 TYR A 169 1.30 -69.60 REMARK 500 6 SER A 170 73.80 31.60 REMARK 500 6 GLN A 172 -115.23 -90.64 REMARK 500 6 ASN A 173 -72.10 -121.09 REMARK 500 6 ASN A 181 -70.12 -61.62 REMARK 500 6 TYR A 225 -62.65 -97.87 REMARK 500 6 GLN A 227 -168.11 58.94 REMARK 500 6 ARG A 228 79.57 23.48 REMARK 500 6 ALA A 230 -12.20 -152.82 REMARK 500 7 VAL A 122 115.58 -166.43 REMARK 500 7 MET A 134 -158.87 -128.28 REMARK 500 7 ARG A 136 103.37 -42.22 REMARK 500 7 HIS A 140 90.54 -58.33 REMARK 500 7 ASP A 147 -70.08 -73.13 REMARK 500 7 TYR A 155 19.16 -59.76 REMARK 500 7 ASN A 171 77.99 -166.29 REMARK 500 7 GLN A 172 -101.65 -93.33 REMARK 500 7 ASN A 173 -58.33 -121.72 REMARK 500 7 ASN A 174 -92.68 -75.11 REMARK 500 7 PHE A 175 -84.74 39.57 REMARK 500 7 LYS A 194 -78.71 -106.31 REMARK 500 7 GLU A 221 -37.90 -141.26 REMARK 500 7 TYR A 225 -75.28 -121.14 REMARK 500 7 GLN A 227 -155.52 50.52 REMARK 500 8 ARG A 156 35.24 -94.12 REMARK 500 8 GLN A 168 -42.30 -145.09 REMARK 500 8 SER A 170 -86.50 51.88 REMARK 500 8 GLN A 172 -55.27 -150.63 REMARK 500 8 ASN A 173 -94.58 -113.89 REMARK 500 8 ASN A 174 -102.37 -92.86 REMARK 500 8 PHE A 175 -65.74 25.14 REMARK 500 8 GLN A 186 0.08 -65.82 REMARK 500 8 GLU A 221 -21.72 -159.93 REMARK 500 8 TYR A 225 -53.45 -120.07 REMARK 500 8 GLN A 227 -159.38 55.42 REMARK 500 9 VAL A 122 112.42 -161.49 REMARK 500 9 ARG A 136 109.32 -48.24 REMARK 500 9 ASN A 153 19.81 -149.51 REMARK 500 9 MET A 154 -14.92 -47.62 REMARK 500 9 ASP A 167 74.50 43.35 REMARK 500 9 GLN A 168 -80.99 -135.72 REMARK 500 9 SER A 170 106.25 -42.00 REMARK 500 9 GLN A 172 -103.89 -66.26 REMARK 500 9 ASN A 173 -65.90 -120.65 REMARK 500 9 TYR A 225 -76.53 -115.15 REMARK 500 9 GLN A 227 -171.49 49.68 REMARK 500 10 VAL A 122 70.16 24.02 REMARK 500 10 ARG A 136 99.16 -50.39 REMARK 500 10 GLN A 172 -111.83 -79.85 REMARK 500 10 ASN A 173 -70.10 -121.11 REMARK 500 10 VAL A 176 -76.36 -78.89 REMARK 500 10 LYS A 194 -69.42 -91.88 REMARK 500 10 GLN A 227 -155.70 57.96 REMARK 500 10 ARG A 228 75.53 25.05 REMARK 500 11 VAL A 122 70.36 44.51 REMARK 500 11 LEU A 125 -154.43 51.00 REMARK 500 11 ASN A 153 22.87 -144.95 REMARK 500 11 ASP A 159 37.76 -98.70 REMARK 500 11 GLN A 168 -90.95 -155.43 REMARK 500 11 ASN A 171 75.45 171.57 REMARK 500 11 GLN A 172 -99.72 -98.07 REMARK 500 11 ASN A 173 -52.14 -122.01 REMARK 500 11 ASN A 174 -100.01 -72.33 REMARK 500 11 PHE A 175 -130.44 53.26 REMARK 500 11 VAL A 176 -64.14 -24.04 REMARK 500 11 GLN A 186 0.21 -62.19 REMARK 500 11 LYS A 194 -94.52 -83.90 REMARK 500 11 GLU A 221 -38.42 -132.40 REMARK 500 11 GLN A 227 -174.63 56.98 REMARK 500 11 ALA A 230 62.82 -160.60 REMARK 500 12 HIS A 140 77.37 -63.69 REMARK 500 12 ASN A 153 49.90 -158.29 REMARK 500 12 PRO A 165 98.65 -60.40 REMARK 500 12 ASP A 167 160.68 58.90 REMARK 500 12 GLN A 168 -175.13 60.91 REMARK 500 12 TYR A 169 -52.49 71.56 REMARK 500 12 SER A 170 -61.98 59.20 REMARK 500 12 GLN A 172 -105.58 -134.85 REMARK 500 12 ASN A 173 -65.64 -123.31 REMARK 500 12 LYS A 194 -74.29 -108.60 REMARK 500 12 GLU A 200 0.19 -64.03 REMARK 500 12 GLU A 221 -33.04 -149.79 REMARK 500 12 GLN A 227 -131.51 -160.88 REMARK 500 12 ARG A 228 -134.48 -130.44 REMARK 500 12 ALA A 230 63.71 -174.13 REMARK 500 13 VAL A 122 106.30 -169.59 REMARK 500 13 MET A 134 -163.11 -167.27 REMARK 500 13 ASP A 159 38.76 -92.69 REMARK 500 13 PRO A 165 94.11 -67.93 REMARK 500 13 TYR A 169 101.40 54.05 REMARK 500 13 GLN A 172 -115.75 -150.90 REMARK 500 13 ASN A 173 -69.56 -121.64 REMARK 500 13 GLN A 186 0.01 -64.57 REMARK 500 13 LYS A 194 -112.97 -115.81 REMARK 500 13 GLU A 221 -58.47 -122.15 REMARK 500 13 GLN A 227 -167.42 57.72 REMARK 500 13 ALA A 230 75.38 -165.01 REMARK 500 14 TYR A 128 -147.63 41.82 REMARK 500 14 ASP A 159 37.52 -85.08 REMARK 500 14 VAL A 166 -100.35 -121.60 REMARK 500 14 ASP A 167 83.86 146.79 REMARK 500 14 GLN A 168 55.56 -97.14 REMARK 500 14 TYR A 169 141.57 79.02 REMARK 500 14 GLN A 172 -115.30 -86.88 REMARK 500 14 ASN A 173 -63.79 -120.16 REMARK 500 14 PHE A 175 -83.95 -24.57 REMARK 500 14 LYS A 194 -105.39 -100.01 REMARK 500 14 GLU A 221 -58.49 -125.81 REMARK 500 15 VAL A 122 60.77 36.73 REMARK 500 15 LEU A 125 169.57 56.97 REMARK 500 15 MET A 134 -156.42 -82.39 REMARK 500 15 ASN A 153 18.25 -141.41 REMARK 500 15 ASP A 159 37.91 -89.30 REMARK 500 15 ASP A 167 75.64 35.74 REMARK 500 15 GLN A 168 -44.37 -158.36 REMARK 500 15 ASN A 171 68.95 -159.50 REMARK 500 15 GLN A 172 -110.91 -103.25 REMARK 500 15 ASN A 173 -71.65 -122.38 REMARK 500 15 GLN A 186 1.22 -69.19 REMARK 500 16 VAL A 122 115.24 -168.56 REMARK 500 16 GLU A 146 1.15 -67.16 REMARK 500 16 TYR A 149 -76.29 -28.45 REMARK 500 16 ASN A 153 31.18 -156.87 REMARK 500 16 GLN A 168 -88.29 -146.06 REMARK 500 16 GLN A 172 -106.47 -147.06 REMARK 500 16 ASN A 173 -64.01 -121.53 REMARK 500 16 LYS A 194 -30.97 -133.23 REMARK 500 16 GLU A 221 -40.29 -151.30 REMARK 500 16 ARG A 228 176.65 62.72 REMARK 500 16 ALA A 230 -49.84 -151.14 REMARK 500 17 PHE A 141 -52.90 -120.39 REMARK 500 17 ASN A 153 39.21 -145.55 REMARK 500 17 PRO A 165 93.98 -64.67 REMARK 500 17 ASP A 167 162.59 62.58 REMARK 500 17 GLN A 168 156.58 67.48 REMARK 500 17 TYR A 169 -1.32 56.03 REMARK 500 17 SER A 170 -157.38 52.00 REMARK 500 17 ASN A 171 56.37 -60.76 REMARK 500 17 GLN A 172 -97.14 -75.70 REMARK 500 17 ASN A 173 -64.11 -121.75 REMARK 500 17 HIS A 187 -68.74 -130.05 REMARK 500 17 LYS A 194 -60.95 -101.42 REMARK 500 17 ASN A 197 -171.19 51.32 REMARK 500 17 PHE A 198 98.57 76.77 REMARK 500 17 TYR A 225 -76.28 -113.96 REMARK 500 17 GLN A 227 -172.46 54.52 REMARK 500 17 ALA A 230 75.23 178.85 REMARK 500 18 VAL A 122 110.77 -165.50 REMARK 500 18 TYR A 128 -152.70 46.56 REMARK 500 18 ARG A 136 109.84 -46.71 REMARK 500 18 ASN A 153 35.07 -159.50 REMARK 500 18 VAL A 166 -100.14 -122.60 REMARK 500 18 ASP A 167 -87.21 162.74 REMARK 500 18 GLN A 168 145.43 63.33 REMARK 500 18 SER A 170 -55.82 -24.28 REMARK 500 18 GLN A 172 -117.42 -119.74 REMARK 500 18 ASN A 173 -76.43 -123.43 REMARK 500 18 GLU A 221 -52.05 -124.00 REMARK 500 19 TYR A 128 -163.84 45.10 REMARK 500 19 MET A 134 -166.75 -161.47 REMARK 500 19 ASN A 153 29.73 -145.75 REMARK 500 19 TYR A 169 87.02 45.59 REMARK 500 19 GLN A 172 -112.87 -73.40 REMARK 500 19 ASN A 173 -54.11 -121.06 REMARK 500 19 GLN A 186 0.76 -66.45 REMARK 500 19 GLN A 227 -5.05 65.80 REMARK 500 19 ALA A 230 -71.53 -162.80 REMARK 500 20 LEU A 125 -160.23 50.05 REMARK 500 20 ASN A 153 50.60 -158.25 REMARK 500 20 VAL A 166 -100.37 -75.80 REMARK 500 20 ASP A 167 -82.63 -152.87 REMARK 500 20 GLN A 168 114.08 179.62 REMARK 500 20 TYR A 169 -30.92 -141.26 REMARK 500 20 SER A 170 -115.44 40.78 REMARK 500 20 ASN A 171 75.76 -102.38 REMARK 500 20 GLN A 172 -114.02 -104.33 REMARK 500 20 ASN A 173 -69.61 -120.74 REMARK 500 20 TYR A 225 -75.06 -102.58 REMARK 500 20 GLN A 227 15.99 -143.45 REMARK 500 20 ARG A 228 -147.41 -157.01 REMARK 500 20 ALA A 230 -14.59 -151.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 228 GLY A 229 2 142.05 REMARK 500 ARG A 164 PRO A 165 4 148.55 REMARK 500 GLY A 142 ASN A 143 5 146.58 REMARK 500 ALA A 230 SER A 231 7 133.20 REMARK 500 TYR A 169 SER A 170 8 -148.46 REMARK 500 VAL A 121 VAL A 122 10 145.59 REMARK 500 ASP A 178 CYS A 179 10 146.02 REMARK 500 GLY A 142 ASN A 143 20 146.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 155 0.11 SIDE_CHAIN REMARK 500 1 ARG A 164 0.09 SIDE_CHAIN REMARK 500 2 TYR A 128 0.07 SIDE_CHAIN REMARK 500 2 TYR A 169 0.09 SIDE_CHAIN REMARK 500 2 ARG A 208 0.09 SIDE_CHAIN REMARK 500 2 ARG A 228 0.13 SIDE_CHAIN REMARK 500 3 ARG A 151 0.09 SIDE_CHAIN REMARK 500 4 ARG A 136 0.10 SIDE_CHAIN REMARK 500 4 ARG A 148 0.10 SIDE_CHAIN REMARK 500 5 ARG A 164 0.10 SIDE_CHAIN REMARK 500 5 ARG A 208 0.10 SIDE_CHAIN REMARK 500 6 ARG A 148 0.09 SIDE_CHAIN REMARK 500 7 ARG A 136 0.13 SIDE_CHAIN REMARK 500 8 ARG A 208 0.11 SIDE_CHAIN REMARK 500 9 ARG A 156 0.08 SIDE_CHAIN REMARK 500 9 ARG A 164 0.18 SIDE_CHAIN REMARK 500 9 PHE A 175 0.11 SIDE_CHAIN REMARK 500 9 PHE A 198 0.08 SIDE_CHAIN REMARK 500 10 TYR A 145 0.08 SIDE_CHAIN REMARK 500 11 TYR A 145 0.10 SIDE_CHAIN REMARK 500 11 ARG A 156 0.09 SIDE_CHAIN REMARK 500 11 TYR A 225 0.08 SIDE_CHAIN REMARK 500 11 TYR A 226 0.16 SIDE_CHAIN REMARK 500 12 ARG A 148 0.10 SIDE_CHAIN REMARK 500 12 TYR A 157 0.07 SIDE_CHAIN REMARK 500 12 ARG A 208 0.10 SIDE_CHAIN REMARK 500 15 TYR A 162 0.06 SIDE_CHAIN REMARK 500 15 ARG A 208 0.09 SIDE_CHAIN REMARK 500 16 ARG A 148 0.10 SIDE_CHAIN REMARK 500 16 TYR A 149 0.14 SIDE_CHAIN REMARK 500 16 TYR A 150 0.10 SIDE_CHAIN REMARK 500 16 ARG A 208 0.10 SIDE_CHAIN REMARK 500 16 ARG A 228 0.13 SIDE_CHAIN REMARK 500 17 ARG A 156 0.08 SIDE_CHAIN REMARK 500 19 ARG A 136 0.10 SIDE_CHAIN REMARK 500 19 TYR A 163 0.08 SIDE_CHAIN REMARK 500 19 TYR A 169 0.09 SIDE_CHAIN REMARK 500 20 ARG A 148 0.07 SIDE_CHAIN REMARK 500 20 ARG A 164 0.09 SIDE_CHAIN REMARK 500 20 ARG A 177 0.10 SIDE_CHAIN REMARK 500 20 ARG A 208 0.13 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 14 TYR A 157 161.0 ALPHA-CARBON REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XYJ RELATED DB: PDB REMARK 900 CAT PRION PROTEIN REMARK 900 RELATED ID: 1XYQ RELATED DB: PDB REMARK 900 PIG PRION PROTEIN
DBREF 1XYK A 121 231 UNP O46501 PRIO_CANFA 84 194
SEQRES 1 A 111 VAL VAL GLY GLY LEU GLY GLY TYR MET LEU GLY SER ALA SEQRES 2 A 111 MET SER ARG PRO LEU ILE HIS PHE GLY ASN ASP TYR GLU SEQRES 3 A 111 ASP ARG TYR TYR ARG GLU ASN MET TYR ARG TYR PRO ASP SEQRES 4 A 111 GLN VAL TYR TYR ARG PRO VAL ASP GLN TYR SER ASN GLN SEQRES 5 A 111 ASN ASN PHE VAL ARG ASP CYS VAL ASN ILE THR VAL LYS SEQRES 6 A 111 GLN HIS THR VAL THR THR THR THR LYS GLY GLU ASN PHE SEQRES 7 A 111 THR GLU THR ASP MET LYS ILE MET GLU ARG VAL VAL GLU SEQRES 8 A 111 GLN MET CYS VAL THR GLN TYR GLN LYS GLU SER GLU ALA SEQRES 9 A 111 TYR TYR GLN ARG GLY ALA SER
HELIX 1 1 ASN A 143 GLU A 152 1 10 HELIX 2 2 ASN A 153 TYR A 157 5 5 HELIX 3 3 ASN A 173 GLY A 195 1 23 HELIX 4 4 THR A 199 GLU A 221 1 23 HELIX 5 5 GLU A 221 TYR A 226 1 6
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000