10 20 30 40 50 60 70 80 1XWA - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ELECTRON TRANSPORT 29-OCT-04 1XWA
TITLE DROSPOHILA THIOREDOXIN, OXIDIZED, P41212
COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: TRX-2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE-30
KEYWDS DIMERIZATION, DROSOPHILA MELANOGASTER, REDOX REGULATION, KEYWDS 2 THIOREDOXIN, X-RAY CRYSTAL STRUCTURE, ELECTRON TRANSPORT
EXPDTA X-RAY DIFFRACTION
AUTHOR M.C.WAHL,A.IRMLER,B.HECKER,R.H.SCHIRMER,K.BECKER
REVDAT 3 24-FEB-09 1XWA 1 VERSN REVDAT 2 15-MAR-05 1XWA 1 JRNL REVDAT 1 16-NOV-04 1XWA 0
JRNL AUTH M.C.WAHL,A.IRMLER,B.HECKER,R.H.SCHIRMER,K.BECKER JRNL TITL COMPARATIVE STRUCTURAL ANALYSIS OF OXIDIZED AND JRNL TITL 2 REDUCED THIOREDOXIN FROM DROSOPHILA MELANOGASTER JRNL REF J.MOL.BIOL. V. 345 1119 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15644209 JRNL DOI 10.1016/J.JMB.2004.11.004
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 32287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1604 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3309 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 418 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1XWA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-NOV-04. REMARK 100 THE RCSB ID CODE IS RCSB030839.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37273 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1AUC REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CDCL2, PEG400, PH 4.6, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.81200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.27200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.27200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.40600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.27200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.27200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 73.21800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.27200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.27200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 24.40600 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.27200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.27200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 73.21800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.81200 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -46.27200 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 46.27200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -24.40600 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 46.27200 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 46.27200 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 73.21800 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 97.62400 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 46.27200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 46.27200 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 73.21800
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B -4 REMARK 465 ALA B -3 REMARK 465 ALA B -2 REMARK 465 ALA B -1 REMARK 465 ALA B 0 REMARK 465 ALA C -4 REMARK 465 ALA C -3 REMARK 465 ALA C -2 REMARK 465 ALA C -1 REMARK 465 ALA C 0 REMARK 465 ALA D -4 REMARK 465 ALA D -3 REMARK 465 ALA D -2 REMARK 465 ALA D -1 REMARK 465 ALA D 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 6 NZ LYS A 6 8665 2.07 REMARK 500 OE1 GLU B 99 CD CD A 802 6455 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A -2 178.67 -45.75 REMARK 500 ALA A -1 -92.64 85.28 REMARK 500 ALA A 0 130.46 128.16 REMARK 500 SER A 19 -105.38 62.76 REMARK 500 SER A 73 -31.95 -145.01 REMARK 500 SER B 19 -105.34 48.97 REMARK 500 ASP B 51 -35.77 90.89 REMARK 500 CYS B 63 54.71 -118.15 REMARK 500 SER B 73 -16.66 -145.24 REMARK 500 SER C 19 -127.97 60.85 REMARK 500 ASP C 51 -27.55 92.57 REMARK 500 SER C 73 -65.93 -141.30 REMARK 500 SER D 19 -134.89 59.34 REMARK 500 ASP D 51 -38.12 80.20 REMARK 500 CYS D 63 61.38 -119.17 REMARK 500 SER D 73 -22.17 -142.98 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 130 DISTANCE = 5.48 ANGSTROMS REMARK 525 HOH C 134 DISTANCE = 5.06 ANGSTROMS REMARK 525 HOH C 140 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH C 152 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH D 159 DISTANCE = 12.55 ANGSTROMS REMARK 525 HOH C 170 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B 171 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH A 967 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH C 172 DISTANCE = 8.76 ANGSTROMS REMARK 525 HOH C 173 DISTANCE = 12.05 ANGSTROMS REMARK 525 HOH C 174 DISTANCE = 16.04 ANGSTROMS REMARK 525 HOH C 175 DISTANCE = 9.67 ANGSTROMS REMARK 525 HOH D 175 DISTANCE = 9.95 ANGSTROMS REMARK 525 HOH C 176 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH C 177 DISTANCE = 5.74 ANGSTROMS REMARK 525 HOH A 973 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH B 179 DISTANCE = 5.75 ANGSTROMS REMARK 525 HOH C 188 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH C 189 DISTANCE = 7.89 ANGSTROMS REMARK 525 HOH D 191 DISTANCE = 11.24 ANGSTROMS REMARK 525 HOH D 192 DISTANCE = 10.38 ANGSTROMS REMARK 525 HOH D 194 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH C 197 DISTANCE = 7.77 ANGSTROMS REMARK 525 HOH C 204 DISTANCE = 11.97 ANGSTROMS REMARK 525 HOH B 205 DISTANCE = 8.12 ANGSTROMS REMARK 525 HOH C 205 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH C 210 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH B 212 DISTANCE = 10.05 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 801 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 99 OE1 REMARK 620 2 GLU A 99 OE2 53.4 REMARK 620 3 HOH A 904 O 92.6 92.8 REMARK 620 4 HOH A 905 O 84.2 86.7 176.4 REMARK 620 5 CL A 901 CL 139.0 85.9 94.2 89.4 REMARK 620 6 GLU B 44 OE1 83.7 137.0 91.7 86.2 136.4 REMARK 620 7 GLU B 44 OE2 135.6 169.1 93.0 88.1 84.4 52.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 802 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 902 O REMARK 620 2 CL A 901 CL 92.5 REMARK 620 3 HOH A 903 O 176.2 91.2 REMARK 620 4 GLU A 44 OE1 91.5 135.4 86.3 REMARK 620 5 GLU A 44 OE2 98.5 83.0 82.6 52.5 REMARK 620 6 GLU B 99 OE1 93.5 138.6 83.2 85.3 136.1 REMARK 620 7 GLU B 99 OE2 92.7 84.7 86.9 139.5 163.6 54.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 803 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 906 O REMARK 620 2 HOH A 907 O 78.5 REMARK 620 3 HOH A 908 O 138.2 71.3 REMARK 620 4 THR A 30 OG1 72.9 133.6 108.7 REMARK 620 5 GLU C 64 OE1 122.6 152.4 96.2 73.2 REMARK 620 6 GLU C 64 OE2 109.3 108.1 107.1 115.4 50.9 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 801 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 802 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 803 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 901
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XW9 RELATED DB: PDB REMARK 900 OXIDIZED DROSPOHILA THIOREDOXIN IN SPACE GROUP P21 REMARK 900 RELATED ID: 1XWB RELATED DB: PDB REMARK 900 OXIDIZED DROSPOHILA THIOREDOXIN IN SPACE GROUP P42212 REMARK 900 RELATED ID: 1XWC RELATED DB: PDB REMARK 900 REDUCED DROSPOHILA THIOREDOXIN IN SPACE GROUP P6522
DBREF 1XWA A 1 106 UNP Q9V429 THIO2_DROME 1 106 DBREF 1XWA B 1 106 UNP Q9V429 THIO2_DROME 1 106 DBREF 1XWA C 1 106 UNP Q9V429 THIO2_DROME 1 106 DBREF 1XWA D 1 106 UNP Q9V429 THIO2_DROME 1 106
SEQADV 1XWA ALA A -4 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA A -3 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA A -2 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA A -1 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA A 0 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA B -4 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA B -3 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA B -2 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA B -1 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA B 0 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA C -4 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA C -3 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA C -2 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA C -1 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA C 0 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA D -4 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA D -3 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA D -2 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA D -1 UNP Q9V429 CLONING ARTIFACT SEQADV 1XWA ALA D 0 UNP Q9V429 CLONING ARTIFACT
SEQRES 1 A 111 ALA ALA ALA ALA ALA MET VAL TYR GLN VAL LYS ASP LYS SEQRES 2 A 111 ALA ASP LEU ASP GLY GLN LEU THR LYS ALA SER GLY LYS SEQRES 3 A 111 LEU VAL VAL LEU ASP PHE PHE ALA THR TRP CYS GLY PRO SEQRES 4 A 111 CYS LYS MET ILE SER PRO LYS LEU VAL GLU LEU SER THR SEQRES 5 A 111 GLN PHE ALA ASP ASN VAL VAL VAL LEU LYS VAL ASP VAL SEQRES 6 A 111 ASP GLU CYS GLU ASP ILE ALA MET GLU TYR ASN ILE SER SEQRES 7 A 111 SER MET PRO THR PHE VAL PHE LEU LYS ASN GLY VAL LYS SEQRES 8 A 111 VAL GLU GLU PHE ALA GLY ALA ASN ALA LYS ARG LEU GLU SEQRES 9 A 111 ASP VAL ILE LYS ALA ASN ILE SEQRES 1 B 111 ALA ALA ALA ALA ALA MET VAL TYR GLN VAL LYS ASP LYS SEQRES 2 B 111 ALA ASP LEU ASP GLY GLN LEU THR LYS ALA SER GLY LYS SEQRES 3 B 111 LEU VAL VAL LEU ASP PHE PHE ALA THR TRP CYS GLY PRO SEQRES 4 B 111 CYS LYS MET ILE SER PRO LYS LEU VAL GLU LEU SER THR SEQRES 5 B 111 GLN PHE ALA ASP ASN VAL VAL VAL LEU LYS VAL ASP VAL SEQRES 6 B 111 ASP GLU CYS GLU ASP ILE ALA MET GLU TYR ASN ILE SER SEQRES 7 B 111 SER MET PRO THR PHE VAL PHE LEU LYS ASN GLY VAL LYS SEQRES 8 B 111 VAL GLU GLU PHE ALA GLY ALA ASN ALA LYS ARG LEU GLU SEQRES 9 B 111 ASP VAL ILE LYS ALA ASN ILE SEQRES 1 C 111 ALA ALA ALA ALA ALA MET VAL TYR GLN VAL LYS ASP LYS SEQRES 2 C 111 ALA ASP LEU ASP GLY GLN LEU THR LYS ALA SER GLY LYS SEQRES 3 C 111 LEU VAL VAL LEU ASP PHE PHE ALA THR TRP CYS GLY PRO SEQRES 4 C 111 CYS LYS MET ILE SER PRO LYS LEU VAL GLU LEU SER THR SEQRES 5 C 111 GLN PHE ALA ASP ASN VAL VAL VAL LEU LYS VAL ASP VAL SEQRES 6 C 111 ASP GLU CYS GLU ASP ILE ALA MET GLU TYR ASN ILE SER SEQRES 7 C 111 SER MET PRO THR PHE VAL PHE LEU LYS ASN GLY VAL LYS SEQRES 8 C 111 VAL GLU GLU PHE ALA GLY ALA ASN ALA LYS ARG LEU GLU SEQRES 9 C 111 ASP VAL ILE LYS ALA ASN ILE SEQRES 1 D 111 ALA ALA ALA ALA ALA MET VAL TYR GLN VAL LYS ASP LYS SEQRES 2 D 111 ALA ASP LEU ASP GLY GLN LEU THR LYS ALA SER GLY LYS SEQRES 3 D 111 LEU VAL VAL LEU ASP PHE PHE ALA THR TRP CYS GLY PRO SEQRES 4 D 111 CYS LYS MET ILE SER PRO LYS LEU VAL GLU LEU SER THR SEQRES 5 D 111 GLN PHE ALA ASP ASN VAL VAL VAL LEU LYS VAL ASP VAL SEQRES 6 D 111 ASP GLU CYS GLU ASP ILE ALA MET GLU TYR ASN ILE SER SEQRES 7 D 111 SER MET PRO THR PHE VAL PHE LEU LYS ASN GLY VAL LYS SEQRES 8 D 111 VAL GLU GLU PHE ALA GLY ALA ASN ALA LYS ARG LEU GLU SEQRES 9 D 111 ASP VAL ILE LYS ALA ASN ILE
HET CD A 801 1 HET CD A 802 1 HET CD A 803 1 HET CL A 901 1
HETNAM CD CADMIUM ION HETNAM CL CHLORIDE ION
FORMUL 5 CD 3(CD 2+) FORMUL 8 CL CL 1- FORMUL 9 HOH *418(H2 O)
HELIX 1 1 ASP A 7 SER A 19 1 13 HELIX 2 2 CYS A 32 PHE A 49 1 18 HELIX 3 3 CYS A 63 TYR A 70 1 8 HELIX 4 4 ASN A 94 ASN A 105 1 12 HELIX 5 5 ASP B 7 ALA B 18 1 12 HELIX 6 6 CYS B 32 PHE B 49 1 18 HELIX 7 7 CYS B 63 TYR B 70 1 8 HELIX 8 8 ASN B 94 ILE B 106 1 13 HELIX 9 9 ASP C 7 SER C 19 1 13 HELIX 10 10 CYS C 32 PHE C 49 1 18 HELIX 11 11 CYS C 63 TYR C 70 1 8 HELIX 12 12 ASN C 94 ILE C 106 1 13 HELIX 13 13 ASP D 7 ALA D 18 1 12 HELIX 14 14 CYS D 32 PHE D 49 1 18 HELIX 15 15 CYS D 63 TYR D 70 1 8 HELIX 16 16 ASN D 94 ILE D 106 1 13
SHEET 1 A 5 VAL A 2 GLN A 4 0 SHEET 2 A 5 VAL A 53 ASP A 59 1 O LYS A 57 N TYR A 3 SHEET 3 A 5 LEU A 22 PHE A 28 1 N ASP A 26 O VAL A 58 SHEET 4 A 5 THR A 77 LYS A 82 -1 O VAL A 79 N LEU A 25 SHEET 5 A 5 VAL A 85 ALA A 91 -1 O VAL A 87 N PHE A 80 SHEET 1 B 5 TYR B 3 GLN B 4 0 SHEET 2 B 5 VAL B 53 ASP B 59 1 O LYS B 57 N TYR B 3 SHEET 3 B 5 LEU B 22 PHE B 28 1 N ASP B 26 O LEU B 56 SHEET 4 B 5 THR B 77 LYS B 82 -1 O VAL B 79 N LEU B 25 SHEET 5 B 5 VAL B 85 ALA B 91 -1 O VAL B 87 N PHE B 80 SHEET 1 C 5 VAL C 2 GLN C 4 0 SHEET 2 C 5 VAL C 53 ASP C 59 1 O LYS C 57 N TYR C 3 SHEET 3 C 5 LEU C 22 PHE C 28 1 N ASP C 26 O VAL C 58 SHEET 4 C 5 THR C 77 LYS C 82 -1 O VAL C 79 N LEU C 25 SHEET 5 C 5 VAL C 85 ALA C 91 -1 O GLU C 88 N PHE C 80 SHEET 1 D 4 VAL D 53 ASP D 59 0 SHEET 2 D 4 LEU D 22 PHE D 28 1 N ASP D 26 O LEU D 56 SHEET 3 D 4 THR D 77 LYS D 82 -1 O LEU D 81 N VAL D 23 SHEET 4 D 4 LYS D 86 ALA D 91 -1 O GLU D 88 N PHE D 80
SSBOND 1 CYS A 32 CYS A 35 1555 1555 2.07 SSBOND 2 CYS B 32 CYS B 35 1555 1555 2.06 SSBOND 3 CYS C 32 CYS C 35 1555 1555 2.05 SSBOND 4 CYS D 32 CYS D 35 1555 1555 2.05
LINK CD CD A 801 OE1 GLU A 99 1555 1555 2.29 LINK CD CD A 801 OE2 GLU A 99 1555 1555 2.56 LINK CD CD A 801 O HOH A 904 1555 1555 2.32 LINK CD CD A 801 O HOH A 905 1555 1555 2.14 LINK CD CD A 801 CL CL A 901 1555 1555 2.69 LINK CD CD A 802 O HOH A 902 1555 1555 2.34 LINK CD CD A 802 CL CL A 901 1555 1555 2.59 LINK CD CD A 802 O HOH A 903 1555 1555 2.15 LINK CD CD A 802 OE1 GLU A 44 1555 1555 2.37 LINK CD CD A 802 OE2 GLU A 44 1555 1555 2.55 LINK CD CD A 803 O HOH A 906 1555 1555 2.50 LINK CD CD A 803 O HOH A 907 1555 1555 2.24 LINK CD CD A 803 O HOH A 908 1555 1555 2.57 LINK CD CD A 803 OG1 THR A 30 1555 1555 2.87 LINK CD CD A 801 OE1 GLU B 44 1555 6555 2.48 LINK CD CD A 801 OE2 GLU B 44 1555 6555 2.50 LINK CD CD A 802 OE1 GLU B 99 1555 6555 2.14 LINK CD CD A 802 OE2 GLU B 99 1555 6555 2.61 LINK CD CD A 803 OE1 GLU C 64 1555 7556 2.58 LINK CD CD A 803 OE2 GLU C 64 1555 7556 2.54
CISPEP 1 MET A 75 PRO A 76 0 -0.50 CISPEP 2 MET B 75 PRO B 76 0 -0.25 CISPEP 3 MET C 75 PRO C 76 0 -0.26 CISPEP 4 MET D 75 PRO D 76 0 -0.54
SITE 1 AC1 5 GLU A 99 CL A 901 HOH A 904 HOH A 905 SITE 2 AC1 5 GLU B 44 SITE 1 AC2 5 GLU A 44 CL A 901 HOH A 902 HOH A 903 SITE 2 AC2 5 GLU B 99 SITE 1 AC3 6 THR A 30 ASP A 61 HOH A 906 HOH A 907 SITE 2 AC3 6 HOH A 908 GLU C 64 SITE 1 AC4 8 LYS A 41 GLU A 44 GLU A 99 CD A 801 SITE 2 AC4 8 CD A 802 LYS B 41 GLU B 44 GLU B 99
CRYST1 92.544 92.544 97.624 90.00 90.00 90.00 P 41 21 2 32
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010806 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010806 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010243 0.00000