10 20 30 40 50 60 70 80 1XUQ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 26-OCT-04 1XUQ
TITLE CRYSTAL STRUCTURE OF SODA-1 (BA4499) FROM BACILLUS TITLE 2 ANTHRACIS AT 1.8A RESOLUTION.
CAVEAT 1XUQ CHIRALITY ERROR AT ASN139B
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SODA-2; COMPND 5 EC: 1.15.1.1; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 GENE: SODA1, SODA-1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-YSBLIC
KEYWDS SODA-1; SUPEROXIDE DISMUTASE; BACILLUS ANTHRACIS; BA4499; KEYWDS 2 SPINE, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR I.W.BOUCHER,V.M.LEVDIKOV,E.V.BLAGOVA,M.J.FOGG,J.A.BRANNIGAN, AUTHOR 2 A.J.WILKINSON,K.S.WILSON
REVDAT 2 24-FEB-09 1XUQ 1 VERSN REVDAT 1 19-JUL-05 1XUQ 0
JRNL AUTH I.W.BOUCHER,A.K.KALLIOMAA,V.M.LEVDIKOV,E.V.BLAGOVA, JRNL AUTH 2 M.J.FOGG,J.A.BRANNIGAN,K.S.WILSON,A.J.WILKINSON JRNL TITL STRUCTURES OF TWO SUPEROXIDE DISMUTASES FROM JRNL TITL 2 BACILLUS ANTHRACIS REVEAL A NOVEL ACTIVE CENTRE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 61 621 2005 JRNL REFN ESSN 1744-3091 JRNL PMID 16511113 JRNL DOI 10.1107/S1744309105017380
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 37842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2001 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2577 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 162 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3195 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 474 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.29000 REMARK 3 B22 (A**2) : -0.98000 REMARK 3 B33 (A**2) : 0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.91000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.028 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3303 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2768 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4501 ; 1.449 ; 1.910 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6463 ; 0.980 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 406 ; 6.530 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;37.421 ;24.944 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 484 ;14.716 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.886 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 466 ; 0.155 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3791 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 685 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 702 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2701 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1567 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1603 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 308 ; 0.165 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.135 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 22 ; 0.237 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.179 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2574 ; 1.657 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 824 ; 0.299 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3207 ; 2.378 ; 4.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1558 ; 6.466 ;66.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1291 ; 6.747 ;10.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 1XUQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-04. REMARK 100 THE RCSB ID CODE IS RCSB030784.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87000 REMARK 200 MONOCHROMATOR : SI MONOCHROMATOR REMARK 200 OPTICS : RH COATED SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39919 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.74800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1JR9 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, SODIUM ACETATE TRIHYDRATE, REMARK 280 TRIS, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.21950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 203 REMARK 465 GLY B -8 REMARK 465 SER B -7 REMARK 465 SER B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 203
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 49 -58.95 -27.24 REMARK 500 ALA A 51 6.48 -69.35 REMARK 500 ASN A 61 50.46 -117.26 REMARK 500 ASN A 149 -124.23 55.20 REMARK 500 GLN A 176 -121.60 42.41 REMARK 500 ASN B 61 51.79 -118.71 REMARK 500 ASN B 138 -68.25 -108.49 REMARK 500 ASN B 139 -108.15 -56.43 REMARK 500 ASN B 149 -121.88 56.32 REMARK 500 GLN B 176 -126.53 43.55 REMARK 500 GLU B 201 23.93 -76.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 139 GLY B 140 118.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN B 139 119.5 ALPHA-CARBON REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 204 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 165 OD2 REMARK 620 2 HOH A 365 O 174.5 REMARK 620 3 HOH A 206 O 86.9 89.4 REMARK 620 4 HIS A 28 NE2 85.6 98.1 172.4 REMARK 620 5 HIS A 83 NE2 104.1 72.0 90.4 90.5 REMARK 620 6 HIS A 169 NE2 109.8 74.1 89.4 94.0 146.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 204 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 165 OD2 REMARK 620 2 HOH B 206 O 87.3 REMARK 620 3 HIS B 28 NE2 86.0 172.4 REMARK 620 4 HIS B 83 NE2 103.3 85.2 93.0 REMARK 620 5 HIS B 169 NE2 109.6 92.4 93.2 146.9 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 204 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 204
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XRE RELATED DB: PDB
DBREF 1XUQ A 1 203 UNP Q81LW0 SODM1_BACAN 1 203 DBREF 1XUQ B 1 203 UNP Q81LW0 SODM1_BACAN 1 203
SEQADV 1XUQ GLY A -8 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ SER A -7 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ SER A -6 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS A -5 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS A -4 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS A -3 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS A -2 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS A -1 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS A 0 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ GLY B -8 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ SER B -7 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ SER B -6 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS B -5 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS B -4 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS B -3 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS B -2 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS B -1 UNP Q81LW0 EXPRESSION TAG SEQADV 1XUQ HIS B 0 UNP Q81LW0 EXPRESSION TAG
SEQRES 1 A 212 GLY SER SER HIS HIS HIS HIS HIS HIS MET ALA LYS HIS SEQRES 2 A 212 GLU LEU PRO ASN LEU PRO TYR ALA TYR ASP ALA LEU GLU SEQRES 3 A 212 PRO HIS PHE ASP LYS GLU THR MET ASN ILE HIS HIS THR SEQRES 4 A 212 LYS HIS HIS ASN THR TYR ILE THR ASN LEU ASN ALA ALA SEQRES 5 A 212 LEU GLU GLY HIS ALA GLU LEU ALA ASP LYS SER VAL GLU SEQRES 6 A 212 GLU LEU VAL ALA ASN LEU ASN GLU VAL PRO GLU ALA ILE SEQRES 7 A 212 ARG THR ALA VAL ARG ASN ASN GLY GLY GLY HIS ALA ASN SEQRES 8 A 212 HIS THR PHE PHE TRP THR ILE LEU SER PRO ASN GLY GLY SEQRES 9 A 212 GLY GLN PRO VAL GLY GLU LEU ALA THR ALA ILE GLU ALA SEQRES 10 A 212 LYS PHE GLY SER PHE ASP ALA PHE LYS GLU GLU PHE ALA SEQRES 11 A 212 LYS ALA GLY ALA THR ARG PHE GLY SER GLY TRP ALA TRP SEQRES 12 A 212 LEU VAL VAL ASN ASN GLY GLU LEU GLU VAL THR SER THR SEQRES 13 A 212 PRO ASN GLN ASP SER PRO LEU THR GLU GLY LYS THR PRO SEQRES 14 A 212 VAL ILE GLY LEU ASP VAL TRP GLU HIS ALA TYR TYR LEU SEQRES 15 A 212 ASN TYR GLN ASN ARG ARG PRO ASP TYR ILE GLY ALA PHE SEQRES 16 A 212 TRP ASN VAL VAL ASP TRP ASN ALA ALA GLU LYS ARG TYR SEQRES 17 A 212 GLN GLU ALA LYS SEQRES 1 B 212 GLY SER SER HIS HIS HIS HIS HIS HIS MET ALA LYS HIS SEQRES 2 B 212 GLU LEU PRO ASN LEU PRO TYR ALA TYR ASP ALA LEU GLU SEQRES 3 B 212 PRO HIS PHE ASP LYS GLU THR MET ASN ILE HIS HIS THR SEQRES 4 B 212 LYS HIS HIS ASN THR TYR ILE THR ASN LEU ASN ALA ALA SEQRES 5 B 212 LEU GLU GLY HIS ALA GLU LEU ALA ASP LYS SER VAL GLU SEQRES 6 B 212 GLU LEU VAL ALA ASN LEU ASN GLU VAL PRO GLU ALA ILE SEQRES 7 B 212 ARG THR ALA VAL ARG ASN ASN GLY GLY GLY HIS ALA ASN SEQRES 8 B 212 HIS THR PHE PHE TRP THR ILE LEU SER PRO ASN GLY GLY SEQRES 9 B 212 GLY GLN PRO VAL GLY GLU LEU ALA THR ALA ILE GLU ALA SEQRES 10 B 212 LYS PHE GLY SER PHE ASP ALA PHE LYS GLU GLU PHE ALA SEQRES 11 B 212 LYS ALA GLY ALA THR ARG PHE GLY SER GLY TRP ALA TRP SEQRES 12 B 212 LEU VAL VAL ASN ASN GLY GLU LEU GLU VAL THR SER THR SEQRES 13 B 212 PRO ASN GLN ASP SER PRO LEU THR GLU GLY LYS THR PRO SEQRES 14 B 212 VAL ILE GLY LEU ASP VAL TRP GLU HIS ALA TYR TYR LEU SEQRES 15 B 212 ASN TYR GLN ASN ARG ARG PRO ASP TYR ILE GLY ALA PHE SEQRES 16 B 212 TRP ASN VAL VAL ASP TRP ASN ALA ALA GLU LYS ARG TYR SEQRES 17 B 212 GLN GLU ALA LYS
HET MN B 204 1 HET MN A 204 1
HETNAM MN MANGANESE (II) ION
FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *474(H2 O)
HELIX 1 1 ASP A 21 LYS A 31 1 11 HELIX 2 2 LYS A 31 GLU A 45 1 15 HELIX 3 3 HIS A 47 ASP A 52 1 6 HELIX 4 4 SER A 54 ASN A 61 1 8 HELIX 5 5 LEU A 62 VAL A 65 5 4 HELIX 6 6 PRO A 66 ILE A 89 1 24 HELIX 7 7 VAL A 99 GLY A 111 1 13 HELIX 8 8 SER A 112 ARG A 127 1 16 HELIX 9 9 SER A 152 GLY A 157 5 6 HELIX 10 10 TRP A 167 ALA A 170 5 4 HELIX 11 11 TYR A 171 GLN A 176 1 6 HELIX 12 12 ARG A 178 TRP A 187 1 10 HELIX 13 13 ASP A 191 ALA A 202 1 12 HELIX 14 14 ASP B 21 LYS B 31 1 11 HELIX 15 15 LYS B 31 LEU B 44 1 14 HELIX 16 16 GLU B 49 LYS B 53 5 5 HELIX 17 17 SER B 54 ASN B 61 1 8 HELIX 18 18 LEU B 62 VAL B 65 5 4 HELIX 19 19 PRO B 66 THR B 88 1 23 HELIX 20 20 VAL B 99 GLY B 111 1 13 HELIX 21 21 SER B 112 ARG B 127 1 16 HELIX 22 22 SER B 152 GLY B 157 5 6 HELIX 23 23 TRP B 167 ALA B 170 5 4 HELIX 24 24 TYR B 171 GLN B 176 1 6 HELIX 25 25 ARG B 178 TRP B 187 1 10 HELIX 26 26 ASP B 191 GLU B 201 1 11
SHEET 1 A 3 GLU A 141 PRO A 148 0 SHEET 2 A 3 GLY A 131 ASN A 138 -1 N ASN A 138 O GLU A 141 SHEET 3 A 3 THR A 159 ASP A 165 -1 O VAL A 161 N LEU A 135 SHEET 1 B 3 LEU B 142 PRO B 148 0 SHEET 2 B 3 GLY B 131 VAL B 137 -1 N VAL B 136 O GLU B 143 SHEET 3 B 3 THR B 159 ASP B 165 -1 O VAL B 161 N LEU B 135
LINK OD2 ASP A 165 MN MN A 204 1555 1555 1.91 LINK OD2 ASP B 165 MN MN B 204 1555 1555 1.94 LINK MN MN B 204 O HOH B 206 1555 1555 2.06 LINK MN MN A 204 O HOH A 365 1555 1555 2.24 LINK MN MN A 204 O HOH A 206 1555 1555 2.19 LINK MN MN A 204 NE2 HIS A 28 1555 1555 2.03 LINK MN MN A 204 NE2 HIS A 83 1555 1555 2.08 LINK MN MN A 204 NE2 HIS A 169 1555 1555 2.08 LINK MN MN B 204 NE2 HIS B 28 1555 1555 2.04 LINK MN MN B 204 NE2 HIS B 83 1555 1555 2.04 LINK MN MN B 204 NE2 HIS B 169 1555 1555 2.07
CISPEP 1 GLU A 17 PRO A 18 0 0.14 CISPEP 2 GLU B 17 PRO B 18 0 2.55
SITE 1 AC1 5 HIS B 28 HIS B 83 ASP B 165 HIS B 169 SITE 2 AC1 5 HOH B 206 SITE 1 AC2 6 HIS A 28 HIS A 83 ASP A 165 HIS A 169 SITE 2 AC2 6 HOH A 206 HOH A 365
CRYST1 60.881 60.439 61.981 90.00 106.30 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016425 0.000000 0.004803 0.00000
SCALE2 0.000000 0.016546 0.000000 0.00000
SCALE3 0.000000 0.000000 0.016810 0.00000