1XR6 - Header Asymmetric Unit

HEADER TRANSFERASE 13-OCT-04 1XR6

TITLE CRYSTAL STRUCTURE OF RNA-DEPENDENT RNA POLYMERASE 3D FROM TITLE 2 HUMAN RHINOVIRUS SEROTYPE 1B

COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA-DIRECTED RNA POLYMERASE; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 1B; SOURCE 3 ORGANISM_TAXID: 12129; SOURCE 4 GENE: P3D; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24A; SOURCE 10 OTHER_DETAILS: T7 PROMOTER

KEYWDS RNA-DEPENDENT RNA POLYMERASE, TRANSFERASE

EXPDTA X-RAY DIFFRACTION

AUTHOR R.A.LOVE,K.A.MAEGLEY,X.YU,R.A.FERRE,L.K.LINGARDO,W.DIEHL, AUTHOR 2 H.E.PARGE,P.S.DRAGOVICH,S.A.FUHRMAN

REVDAT 2 24-FEB-09 1XR6 1 VERSN REVDAT 1 26-OCT-04 1XR6 0

SPRSDE 26-OCT-04 1XR6 1TE8

JRNL AUTH R.A.LOVE,K.A.MAEGLEY,X.YU,R.A.FERRE,L.K.LINGARDO, JRNL AUTH 2 W.DIEHL,H.E.PARGE,P.S.DRAGOVICH,S.A.FUHRMAN JRNL TITL THE CRYSTAL STRUCTURE OF THE RNA-DEPENDENT RNA JRNL TITL 2 POLYMERASE FROM HUMAN RHINOVIRUS: A DUAL-FUNCTION JRNL TITL 3 TARGET FOR COMMON COLD ANTIVIRAL THERAPY JRNL REF STRUCTURE V. 12 1533 2004 JRNL REFN ISSN 0969-2126 JRNL PMID 15296746 JRNL DOI 10.1016/J.STR.2004.05.024

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28456 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1520 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2014 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 135 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3688 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.79000 REMARK 3 B22 (A**2) : 1.79000 REMARK 3 B33 (A**2) : -2.68000 REMARK 3 B12 (A**2) : 0.89000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.324 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.248 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.453 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3776 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3396 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5104 ; 1.121 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7962 ; 0.779 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 459 ; 5.472 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 164 ;38.331 ;24.512 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;19.953 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 566 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4121 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 751 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 786 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3809 ; 0.217 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2204 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 147 ; 0.144 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.091 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.146 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 32 ; 0.226 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.143 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2294 ; 0.481 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3726 ; 0.929 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1482 ; 1.096 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1378 ; 1.950 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS

REMARK 4 REMARK 4 1XR6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-04. REMARK 100 THE RCSB ID CODE IS RCSB030672.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30009 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.05500 REMARK 200 R SYM FOR SHELL (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM POTASSIUM TARTRATE, ADA, PH REMARK 280 6.50, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 286K

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 124.13200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.06600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.06600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 124.13200 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 47 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 239 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 338 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 70 99.09 -65.56 REMARK 500 LYS A 275 -110.83 53.82 REMARK 500 CYS A 289 -137.25 -161.34 REMARK 500 SER A 290 81.67 -53.67 REMARK 500 LYS A 358 11.76 55.58 REMARK 500 REMARK 500 REMARK: NULL

REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 475 DISTANCE = 5.68 ANGSTROMS

REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 461 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 284 O REMARK 620 2 LEU A 267 O 77.5 REMARK 620 3 CYS A 268 O 104.5 76.9 REMARK 620 4 SER A 270 OG 141.0 85.5 105.3 REMARK 620 5 VAL A 281 O 146.9 118.5 57.1 71.8 REMARK 620 6 GLY A 283 O 67.2 132.0 81.5 141.9 82.0 REMARK 620 N 1 2 3 4 5

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 461

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TE8 RELATED DB: PDB REMARK 900 RELATED ID: 1TEB RELATED DB: PDB REMARK 900 RELATED ID: 1TE9 RELATED DB: PDB REMARK 900 RELATED ID: 1XR5 RELATED DB: PDB REMARK 900 RELATED ID: 1XR7 RELATED DB: PDB

REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONFLICTS LISTED IN THE SEQADV RECORDS REPRESENT REMARK 999 NORMAL VARIATION WITHIN THE RHINOVIRUS SEROTYPE REMARK 999 SOURCE OF THIS PROTEIN

DBREF 1XR6 A 1 460 UNP P12916 POLG_HRV1B 1698 2157

SEQADV 1XR6 LEU A 43 UNP P12916 SER 1740 SEE REMARK 999 SEQADV 1XR6 THR A 44 UNP P12916 ARG 1741 SEE REMARK 999

SEQRES 1 A 460 GLY GLN ILE LYS ILE SER LYS HIS ALA ASN GLU CYS GLY SEQRES 2 A 460 LEU PRO THR ILE HIS THR PRO SER LYS THR LYS LEU GLN SEQRES 3 A 460 PRO SER VAL PHE TYR ASP VAL PHE PRO GLY SER LYS GLU SEQRES 4 A 460 PRO ALA VAL LEU THR ASP ASN ASP PRO ARG LEU LYS VAL SEQRES 5 A 460 ASN PHE LYS GLU ALA LEU PHE SER LYS TYR LYS GLY ASN SEQRES 6 A 460 THR GLU CYS SER LEU ASN GLN HIS MET GLU ILE ALA ILE SEQRES 7 A 460 ALA HIS TYR SER ALA GLN LEU ILE THR LEU ASP ILE ASP SEQRES 8 A 460 SER LYS PRO ILE ALA LEU GLU ASP SER VAL PHE GLY ILE SEQRES 9 A 460 GLU GLY LEU GLU ALA LEU ASP LEU ASN THR SER ALA GLY SEQRES 10 A 460 PHE PRO TYR VAL THR MET GLY ILE LYS LYS ARG ASP LEU SEQRES 11 A 460 ILE ASN ASN LYS THR LYS ASP ILE SER ARG LEU LYS GLU SEQRES 12 A 460 ALA LEU ASP LYS TYR GLY VAL ASP LEU PRO MET ILE THR SEQRES 13 A 460 PHE LEU LYS ASP GLU LEU ARG LYS LYS GLU LYS ILE SER SEQRES 14 A 460 ALA GLY LYS THR ARG VAL ILE GLU ALA SER SER ILE ASN SEQRES 15 A 460 ASP THR ILE LEU PHE ARG THR THR PHE GLY ASN LEU PHE SEQRES 16 A 460 SER LYS PHE HIS LEU ASN PRO GLY VAL VAL THR GLY SER SEQRES 17 A 460 ALA VAL GLY CYS ASP PRO GLU THR PHE TRP SER LYS ILE SEQRES 18 A 460 PRO VAL MET LEU ASP GLY ASP CYS ILE MET ALA PHE ASP SEQRES 19 A 460 TYR THR ASN TYR ASP GLY SER ILE HIS PRO VAL TRP PHE SEQRES 20 A 460 GLN ALA LEU LYS LYS VAL LEU GLU ASN LEU SER PHE GLN SEQRES 21 A 460 SER ASN LEU ILE ASP ARG LEU CYS TYR SER LYS HIS LEU SEQRES 22 A 460 PHE LYS SER THR TYR TYR GLU VAL ALA GLY GLY VAL PRO SEQRES 23 A 460 SER GLY CYS SER GLY THR SER ILE PHE ASN THR MET ILE SEQRES 24 A 460 ASN ASN ILE ILE ILE ARG THR LEU VAL LEU ASP ALA TYR SEQRES 25 A 460 LYS ASN ILE ASP LEU ASP LYS LEU LYS ILE ILE ALA TYR SEQRES 26 A 460 GLY ASP ASP VAL ILE PHE SER TYR LYS TYR THR LEU ASP SEQRES 27 A 460 MET GLU ALA ILE ALA ASN GLU GLY LYS LYS TYR GLY LEU SEQRES 28 A 460 THR ILE THR PRO ALA ASP LYS SER THR GLU PHE LYS LYS SEQRES 29 A 460 LEU ASP TYR ASN ASN VAL THR PHE LEU LYS ARG GLY PHE SEQRES 30 A 460 LYS GLN ASP GLU LYS HIS THR PHE LEU ILE HIS PRO THR SEQRES 31 A 460 PHE PRO VAL GLU GLU ILE TYR GLU SER ILE ARG TRP THR SEQRES 32 A 460 LYS LYS PRO SER GLN MET GLN GLU HIS VAL LEU SER LEU SEQRES 33 A 460 CYS HIS LEU MET TRP HIS ASN GLY ARG LYS VAL TYR GLU SEQRES 34 A 460 ASP PHE SER SER LYS ILE ARG SER VAL SER ALA GLY ARG SEQRES 35 A 460 ALA LEU TYR ILE PRO PRO TYR ASP LEU LEU LYS HIS GLU SEQRES 36 A 460 TRP TYR GLU LYS PHE

HET K A 461 1

HETNAM K POTASSIUM ION

FORMUL 2 K K 1+ FORMUL 3 HOH *251(H2 O)

HELIX 1 1 ASN A 10 GLY A 13 5 4 HELIX 2 2 ASN A 53 SER A 60 1 8 HELIX 3 3 ASN A 71 THR A 87 1 17 HELIX 4 4 ALA A 96 GLY A 103 1 8 HELIX 5 5 PRO A 119 GLY A 124 5 6 HELIX 6 6 LYS A 126 ILE A 131 1 6 HELIX 7 7 ILE A 138 GLY A 149 1 12 HELIX 8 8 LYS A 164 ALA A 170 1 7 HELIX 9 9 SER A 180 ASN A 201 1 22 HELIX 10 10 ASP A 213 LEU A 225 1 13 HELIX 11 11 TYR A 238 ILE A 242 5 5 HELIX 12 12 HIS A 243 LEU A 257 1 15 HELIX 13 13 SER A 261 LEU A 263 5 3 HELIX 14 14 ILE A 264 CYS A 268 1 5 HELIX 15 15 GLY A 291 TYR A 312 1 22 HELIX 16 16 ASP A 316 LEU A 320 5 5 HELIX 17 17 ASP A 338 GLU A 345 1 8 HELIX 18 18 GLY A 346 GLY A 350 5 5 HELIX 19 19 PRO A 392 ARG A 401 1 10 HELIX 20 20 LYS A 405 SER A 407 5 3 HELIX 21 21 GLN A 408 TRP A 421 1 14 HELIX 22 22 GLY A 424 ARG A 436 1 13 HELIX 23 23 VAL A 438 LEU A 444 1 7 HELIX 24 24 PRO A 448 GLU A 458 1 11

SHEET 1 A 5 GLN A 2 HIS A 8 0 SHEET 2 A 5 THR A 277 ALA A 282 -1 O ALA A 282 N GLN A 2 SHEET 3 A 5 TYR A 269 PHE A 274 -1 N HIS A 272 O TYR A 279 SHEET 4 A 5 MET A 154 LEU A 158 1 N MET A 154 O LYS A 271 SHEET 5 A 5 VAL A 175 ALA A 178 -1 O ILE A 176 N PHE A 157 SHEET 1 B 2 GLN A 26 PRO A 27 0 SHEET 2 B 2 TRP A 402 THR A 403 -1 O THR A 403 N GLN A 26 SHEET 1 C 2 GLU A 39 PRO A 40 0 SHEET 2 C 2 LEU A 162 ARG A 163 -1 O ARG A 163 N GLU A 39 SHEET 1 D 3 CYS A 229 ALA A 232 0 SHEET 2 D 3 ASP A 328 TYR A 333 -1 O PHE A 331 N MET A 231 SHEET 3 D 3 LYS A 321 TYR A 325 -1 N TYR A 325 O ASP A 328 SHEET 1 E 2 ASP A 234 TYR A 235 0 SHEET 2 E 2 ILE A 353 THR A 354 -1 O THR A 354 N ASP A 234 SHEET 1 F 2 GLY A 376 GLN A 379 0 SHEET 2 F 2 ILE A 387 THR A 390 -1 O HIS A 388 N LYS A 378

LINK K K A 461 O GLY A 284 1555 1555 2.66 LINK K K A 461 O LEU A 267 1555 1555 2.71 LINK K K A 461 O CYS A 268 1555 1555 2.76 LINK K K A 461 OG SER A 270 1555 1555 2.84 LINK K K A 461 O VAL A 281 1555 1555 3.57 LINK K K A 461 O GLY A 283 1555 1555 2.70

CISPEP 1 PHE A 118 PRO A 119 0 -1.86

SITE 1 AC1 6 LEU A 267 CYS A 268 SER A 270 VAL A 281 SITE 2 AC1 6 GLY A 283 GLY A 284

CRYST1 88.395 88.395 186.198 90.00 90.00 120.00 P 32 2 1 6

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.011313 0.006531 0.000000 0.00000

SCALE2 0.000000 0.013063 0.000000 0.00000

SCALE3 0.000000 0.000000 0.005371 0.00000