10 20 30 40 50 60 70 80 1XN9 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RIBOSOME 04-OCT-04 1XN9
TITLE SOLUTION STRUCTURE OF METHANOSARCINA MAZEI PROTEIN RPS24E: TITLE 2 THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MAR11
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S24E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; SOURCE 3 ORGANISM_TAXID: 2209; SOURCE 4 GENE: RPS24E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS BETA+ALPHA, GFT NMR, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, PSI, NESG, MAR11, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, RIBOSOME
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR G.LIU,R.XIAO,D.PARISH,L.MA,D.SUKUMARAN,T.ACTON, AUTHOR 2 G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG)
REVDAT 3 24-FEB-09 1XN9 1 VERSN REVDAT 2 25-JAN-05 1XN9 1 AUTHOR KEYWDS REVDAT 1 14-DEC-04 1XN9 0
JRNL AUTH G.LIU,R.XIAO,D.PARISH,L.MA,D.SUKUMARAN,T.ACTON, JRNL AUTH 2 G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION STRUCTURE OF METHANOSARCINA MAZEI PROTEIN JRNL TITL 2 RPS24E: THE NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 CONSORTIUM TARGET MAR11 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1XN9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-04. REMARK 100 THE RCSB ID CODE IS RCSB030543.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.04 MM, NMR BUFFER 6.5, 10MM REMARK 210 DTT, 5MM CACL2, 100MM NACL, REMARK 210 20MM NH4OAC, 0.02% NAN3, 5% REMARK 210 D2O, PH 6.5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : GFT (4,3)D HNNCABCA, GFT (4, REMARK 210 3)D CABCA(CO)NHN, GFT (4,3)D REMARK 210 HABCAB(CO)NHN, SIMULTANEOUS REMARK 210 HETERONUCLEAR RESOLVED [1H,1H] REMARK 210 -NOESY, GFT (4,3)D HCCH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, XEASY 1.3.1.3, REMARK 210 DYANA 1.5, AUTOASSIGN 1.13.2, REMARK 210 AUTOSTRUCTURE 2.0.0, CYANA REMARK 210 1.0.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING GFT TECHNIQUES.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 15 32.15 79.75 REMARK 500 1 ARG A 54 130.60 177.48 REMARK 500 1 GLN A 62 57.49 38.11 REMARK 500 1 ASN A 89 39.96 -162.45 REMARK 500 1 PRO A 92 -162.61 -75.04 REMARK 500 1 SER A 94 -137.56 -143.44 REMARK 500 1 THR A 96 132.43 179.18 REMARK 500 1 GLU A 99 -150.73 -138.72 REMARK 500 1 GLU A 100 155.28 175.91 REMARK 500 2 GLN A 62 60.57 37.11 REMARK 500 2 VAL A 85 -140.53 -112.74 REMARK 500 2 LEU A 86 97.21 -43.10 REMARK 500 2 ASN A 89 53.90 -149.84 REMARK 500 2 SER A 94 118.42 171.58 REMARK 500 2 THR A 96 -143.86 -119.50 REMARK 500 2 GLU A 99 139.76 -174.22 REMARK 500 2 GLU A 100 153.98 179.16 REMARK 500 3 ILE A 6 -71.70 -81.54 REMARK 500 3 ASN A 15 40.96 80.84 REMARK 500 3 ARG A 54 121.41 -174.99 REMARK 500 3 MET A 61 24.78 -148.56 REMARK 500 3 GLN A 62 51.53 36.26 REMARK 500 3 VAL A 85 -138.01 -115.69 REMARK 500 3 LEU A 86 84.59 -59.69 REMARK 500 3 ASN A 89 49.39 -162.30 REMARK 500 3 PRO A 92 -166.29 -74.96 REMARK 500 3 SER A 94 121.80 168.90 REMARK 500 3 GLU A 95 143.96 -171.67 REMARK 500 3 THR A 96 -142.67 -102.23 REMARK 500 3 GLU A 99 139.76 -174.39 REMARK 500 4 ILE A 6 -73.97 -76.23 REMARK 500 4 ASN A 15 43.20 76.06 REMARK 500 4 ARG A 54 127.68 -170.73 REMARK 500 4 MET A 61 23.34 -142.29 REMARK 500 4 GLN A 62 58.49 36.40 REMARK 500 4 VAL A 85 -135.69 -120.89 REMARK 500 4 LEU A 86 76.85 -64.55 REMARK 500 4 ASN A 89 46.90 -109.90 REMARK 500 4 SER A 94 118.66 74.41 REMARK 500 4 GLU A 95 138.41 -176.34 REMARK 500 4 THR A 96 -144.60 -133.57 REMARK 500 4 GLU A 99 139.63 -173.88 REMARK 500 5 ILE A 6 -70.73 -74.31 REMARK 500 5 ASN A 15 40.61 81.84 REMARK 500 5 ARG A 54 125.53 175.80 REMARK 500 5 GLN A 62 57.07 36.56 REMARK 500 5 VAL A 85 -148.40 -84.06 REMARK 500 5 LEU A 86 115.82 -39.76 REMARK 500 5 ASN A 89 49.49 -148.52 REMARK 500 5 ALA A 90 128.38 -171.01 REMARK 500 5 SER A 94 122.33 71.22 REMARK 500 5 THR A 96 -143.76 -125.37 REMARK 500 5 GLU A 97 134.03 176.16 REMARK 500 5 GLU A 99 -151.66 -143.09 REMARK 500 5 GLU A 100 127.73 -178.30 REMARK 500 6 ASN A 11 82.33 -153.06 REMARK 500 6 SER A 28 160.73 -48.73 REMARK 500 6 ARG A 54 127.61 179.42 REMARK 500 6 GLN A 62 55.15 37.13 REMARK 500 6 VAL A 85 -150.07 -91.16 REMARK 500 6 LEU A 86 99.82 -55.39 REMARK 500 6 ASN A 89 50.45 -163.77 REMARK 500 6 PRO A 92 -169.18 -75.00 REMARK 500 6 SER A 94 125.42 167.60 REMARK 500 6 THR A 96 -144.12 -111.18 REMARK 500 6 GLU A 97 99.34 172.78 REMARK 500 6 GLU A 100 131.06 178.79 REMARK 500 7 ILE A 6 -73.23 -72.02 REMARK 500 7 ARG A 54 121.41 -172.89 REMARK 500 7 MET A 61 26.24 -146.83 REMARK 500 7 GLN A 62 51.22 36.33 REMARK 500 7 VAL A 85 -136.98 -114.30 REMARK 500 7 LEU A 86 84.89 -59.72 REMARK 500 7 ASN A 89 46.01 -148.45 REMARK 500 7 ALA A 90 124.57 -170.36 REMARK 500 7 SER A 94 124.14 171.11 REMARK 500 7 THR A 96 -143.84 -129.23 REMARK 500 7 GLU A 97 172.64 174.21 REMARK 500 7 GLU A 99 -151.18 -130.40 REMARK 500 8 ASN A 15 33.97 75.54 REMARK 500 8 GLU A 26 55.10 -115.01 REMARK 500 8 SER A 28 161.58 62.37 REMARK 500 8 ARG A 54 120.36 177.75 REMARK 500 8 GLN A 62 58.66 38.13 REMARK 500 8 ASN A 89 45.93 -163.84 REMARK 500 8 PRO A 92 -162.59 -74.99 REMARK 500 8 SER A 94 125.40 169.96 REMARK 500 8 THR A 96 130.52 -176.22 REMARK 500 8 GLU A 97 108.61 176.99 REMARK 500 8 GLU A 99 -151.76 -137.35 REMARK 500 8 GLU A 100 150.83 178.68 REMARK 500 9 ILE A 6 -70.57 -76.35 REMARK 500 9 ASN A 15 41.62 70.87 REMARK 500 9 ARG A 54 123.53 -176.03 REMARK 500 9 GLN A 62 48.34 37.62 REMARK 500 9 VAL A 85 -135.18 -102.11 REMARK 500 9 LEU A 86 104.77 -41.01 REMARK 500 9 ASN A 89 49.26 -148.99 REMARK 500 9 SER A 94 123.36 170.55 REMARK 500 9 GLU A 95 -168.77 -112.81 REMARK 500 9 THR A 96 132.86 178.25 REMARK 500 9 GLU A 99 -150.34 -138.24 REMARK 500 9 GLU A 100 142.04 -178.66 REMARK 500 10 ASN A 15 38.33 79.44 REMARK 500 10 ARG A 54 124.54 -176.78 REMARK 500 10 GLN A 62 60.15 38.03 REMARK 500 10 VAL A 85 -136.49 -106.45 REMARK 500 10 LEU A 86 101.55 -40.16 REMARK 500 10 ASN A 89 46.56 -157.39 REMARK 500 10 PRO A 92 -166.33 -75.01 REMARK 500 10 SER A 94 -136.95 -147.71 REMARK 500 10 GLU A 95 141.26 71.95 REMARK 500 10 THR A 96 -145.95 -122.61 REMARK 500 10 GLU A 99 139.82 -174.52 REMARK 500 10 GLU A 100 119.98 -177.87 REMARK 500 11 ILE A 6 -74.11 -68.97 REMARK 500 11 ASN A 15 41.53 73.30 REMARK 500 11 ARG A 54 127.07 177.08 REMARK 500 11 GLN A 62 67.76 29.45 REMARK 500 11 VAL A 85 -150.93 -98.87 REMARK 500 11 LEU A 86 103.24 -43.37 REMARK 500 11 ASN A 89 48.87 -162.82 REMARK 500 11 PRO A 92 -167.72 -75.01 REMARK 500 11 SER A 94 125.26 168.75 REMARK 500 11 THR A 96 129.46 -173.84 REMARK 500 11 GLU A 99 139.72 -174.35 REMARK 500 12 ARG A 54 128.23 -179.45 REMARK 500 12 GLN A 62 55.40 37.43 REMARK 500 12 VAL A 85 -135.80 -120.04 REMARK 500 12 LEU A 86 84.06 -59.98 REMARK 500 12 ASN A 89 48.70 -152.45 REMARK 500 12 PRO A 92 -162.13 -75.04 REMARK 500 12 SER A 94 -137.19 -141.29 REMARK 500 12 THR A 96 132.73 -179.60 REMARK 500 12 GLU A 99 -150.88 -128.84 REMARK 500 13 ILE A 6 -73.86 -75.64 REMARK 500 13 ASN A 15 33.65 80.49 REMARK 500 13 ARG A 54 124.47 -170.65 REMARK 500 13 GLN A 62 47.63 35.85 REMARK 500 13 VAL A 85 -151.12 -101.34 REMARK 500 13 LEU A 86 94.54 -50.81 REMARK 500 13 ASN A 89 50.25 -163.24 REMARK 500 13 ALA A 90 130.47 -173.16 REMARK 500 13 PRO A 92 -163.78 -75.03 REMARK 500 13 SER A 94 -137.03 -148.64 REMARK 500 13 GLU A 95 -165.99 -103.86 REMARK 500 13 THR A 96 131.88 177.47 REMARK 500 13 GLU A 99 -150.40 -130.33 REMARK 500 13 GLU A 100 172.59 175.18 REMARK 500 14 ILE A 6 -70.78 -76.59 REMARK 500 14 ARG A 16 -169.80 -114.54 REMARK 500 14 ARG A 54 121.27 177.53 REMARK 500 14 GLN A 62 56.55 36.47 REMARK 500 14 VAL A 85 -154.60 -96.43 REMARK 500 14 LEU A 86 93.00 -55.30 REMARK 500 14 ASN A 89 49.86 -99.72 REMARK 500 14 ALA A 90 121.77 66.08 REMARK 500 14 PRO A 92 -167.97 -75.02 REMARK 500 14 SER A 94 101.86 59.64 REMARK 500 14 GLU A 95 144.73 -177.93 REMARK 500 14 THR A 96 130.18 -174.31 REMARK 500 14 GLU A 99 -147.61 -84.15 REMARK 500 15 ILE A 6 -70.94 -79.87 REMARK 500 15 ASN A 15 35.54 79.11 REMARK 500 15 ARG A 54 124.06 179.86 REMARK 500 15 MET A 61 27.14 -149.68 REMARK 500 15 GLN A 62 56.28 36.13 REMARK 500 15 VAL A 85 -149.84 -92.96 REMARK 500 15 LEU A 86 92.36 -62.77 REMARK 500 15 ASN A 89 51.44 -163.74 REMARK 500 15 PRO A 92 -164.38 -74.96 REMARK 500 15 SER A 94 -135.23 -158.52 REMARK 500 15 GLU A 95 146.23 -171.05 REMARK 500 15 THR A 96 133.09 177.94 REMARK 500 15 GLU A 99 139.86 -174.94 REMARK 500 15 GLU A 100 129.15 -175.69 REMARK 500 16 ASN A 15 34.61 73.23 REMARK 500 16 SER A 28 161.34 58.29 REMARK 500 16 ARG A 54 127.68 178.58 REMARK 500 16 MET A 61 14.86 -142.37 REMARK 500 16 GLN A 62 60.99 37.60 REMARK 500 16 VAL A 85 -149.67 -85.07 REMARK 500 16 LEU A 86 94.32 -62.69 REMARK 500 16 ASN A 89 47.96 -148.91 REMARK 500 16 SER A 94 115.87 72.25 REMARK 500 16 GLU A 95 146.26 -177.38 REMARK 500 16 THR A 96 133.13 178.35 REMARK 500 16 GLU A 99 139.91 -175.19 REMARK 500 17 ASN A 15 42.89 81.44 REMARK 500 17 GLU A 26 60.28 -102.64 REMARK 500 17 SER A 28 160.58 57.99 REMARK 500 17 ARG A 54 123.18 -171.54 REMARK 500 17 GLN A 62 45.20 36.57 REMARK 500 17 LEU A 86 97.54 -40.30 REMARK 500 17 ASN A 89 52.09 -150.04 REMARK 500 17 ALA A 90 123.19 -178.09 REMARK 500 17 SER A 94 119.17 168.43 REMARK 500 17 GLU A 95 -167.13 -109.46 REMARK 500 17 THR A 96 -143.50 -130.76 REMARK 500 17 GLU A 97 109.61 -175.31 REMARK 500 17 GLU A 99 -151.18 -142.20 REMARK 500 17 GLU A 100 148.61 -177.34 REMARK 500 18 ASN A 15 45.93 72.76 REMARK 500 18 ARG A 54 124.64 -176.46 REMARK 500 18 GLN A 62 57.72 37.71 REMARK 500 18 LEU A 86 98.24 -43.65 REMARK 500 18 ASN A 89 49.07 -149.30 REMARK 500 18 PRO A 92 -166.52 -75.02 REMARK 500 18 SER A 94 -137.06 -147.73 REMARK 500 18 THR A 96 131.80 -178.84 REMARK 500 18 GLU A 99 139.67 -174.11 REMARK 500 19 ILE A 6 -70.16 -76.49 REMARK 500 19 GLU A 26 68.40 -102.92 REMARK 500 19 SER A 28 160.24 57.76 REMARK 500 19 ARG A 54 127.91 175.49 REMARK 500 19 VAL A 85 -137.54 -116.12 REMARK 500 19 LEU A 86 83.62 -60.43 REMARK 500 19 ARG A 88 172.83 -55.04 REMARK 500 19 SER A 94 126.41 162.76 REMARK 500 19 THR A 96 131.17 -178.08 REMARK 500 19 GLU A 97 96.42 -175.13 REMARK 500 19 GLU A 99 -149.85 -148.03 REMARK 500 19 GLU A 100 109.98 56.85 REMARK 500 20 ILE A 6 -74.19 -74.96 REMARK 500 20 ASN A 15 33.91 82.03 REMARK 500 20 ARG A 54 126.58 -177.87 REMARK 500 20 GLN A 62 53.91 36.45 REMARK 500 20 VAL A 85 -129.82 -108.24 REMARK 500 20 LEU A 86 100.23 -38.43 REMARK 500 20 ASN A 89 53.88 -107.11 REMARK 500 20 ALA A 90 125.92 67.41 REMARK 500 20 PRO A 92 -164.87 -75.06 REMARK 500 20 SER A 94 125.19 168.19 REMARK 500 20 GLU A 97 171.25 59.29 REMARK 500 20 GLU A 99 -152.23 -141.89 REMARK 500 20 GLU A 100 95.10 -179.58 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MAR11 RELATED DB: TARGETDB
DBREF 1XN9 A 1 101 UNP Q8PZ95 RS24_METMA 1 101
SEQRES 1 A 101 MET ASP ILE LYS ILE ILE LYS ASP LYS LYS ASN PRO LEU SEQRES 2 A 101 LEU ASN ARG ARG GLU LEU ASP PHE ILE VAL LYS TYR GLU SEQRES 3 A 101 GLY SER THR PRO SER ARG ASN ASP VAL ARG ASN LYS LEU SEQRES 4 A 101 ALA ALA MET LEU ASN ALA PRO LEU GLU LEU LEU VAL ILE SEQRES 5 A 101 GLN ARG ILE LYS THR GLU TYR GLY MET GLN GLU SER LYS SEQRES 6 A 101 GLY TYR ALA LYS LEU TYR GLU ASP ALA ASP ARG MET LYS SEQRES 7 A 101 GLN VAL GLU GLN GLU TYR VAL LEU LYS ARG ASN ALA VAL SEQRES 8 A 101 PRO GLY SER GLU THR GLU GLY GLU GLU ALA
HELIX 1 1 SER A 31 LEU A 43 1 13 HELIX 2 2 ASP A 73 GLN A 82 1 10 HELIX 3 3 GLU A 83 LEU A 86 5 4
SHEET 1 A 4 ASP A 2 ASN A 11 0 SHEET 2 A 4 ARG A 16 LYS A 24 -1 O LYS A 24 N ASP A 2 SHEET 3 A 4 GLU A 63 LEU A 70 -1 O SER A 64 N VAL A 23 SHEET 4 A 4 LEU A 50 THR A 57 -1 N LYS A 56 O LYS A 65
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000