10 20 30 40 50 60 70 80 1XJL - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIPID BINDING PROTEIN 23-SEP-04 1XJL
TITLE STRUCTURE OF HUMAN ANNEXIN A2 IN THE PRESENCE OF CALCIUM TITLE 2 IONS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANNEXIN A2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ANNEXIN II, LIPOCORTIN II, CALPACTIN I HEAVY COMPND 5 CHAIN, CHROMOBINDIN 8, P36, PROTEIN I, PLACENTAL COMPND 6 ANTICOAGULANT PROTEIN IV, PAP-IV; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ANXA2, ANX2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS ANNEXINS, CALCIUM-BINDING PROTEIN, LIPID-BINDING PROTEIN, KEYWDS 2 LIPID BINDING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR A.ROSENGARTH,H.LUECKE
REVDAT 2 24-FEB-09 1XJL 1 VERSN REVDAT 1 09-NOV-04 1XJL 0
JRNL AUTH A.ROSENGARTH,H.LUECKE JRNL TITL ANNEXIN A2: DOES IT INDUCE MEMBRANE AGGREGATION BY JRNL TITL 2 A NEW MULTIMERIC STATE OF THE PROTEIN? JRNL REF ANNEXINS V. 1 129 2004 JRNL REFN ISSN 1547-6294
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 26575.900 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 30846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3091 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.71 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2717 REMARK 3 BIN R VALUE (WORKING SET) : 0.3540 REMARK 3 BIN FREE R VALUE : 0.3870 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 316 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5124 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 212 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.06000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -10.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM SIGMAA (A) : 0.45 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.54 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 17.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.76 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.310 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.220 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.010 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.140 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 24.28 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1XJL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-04. REMARK 100 THE RCSB ID CODE IS RCSB030428.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34340 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, CALCIUM ACETATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.89050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.13650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.05250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.13650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.89050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.05250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 182 CB - CA - C ANGL. DEV. = -12.7 DEGREES REMARK 500 ASP A 182 N - CA - C ANGL. DEV. = 23.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 22 86.96 -164.10 REMARK 500 THR A 31 -72.96 -57.19 REMARK 500 ASP A 34 72.90 -169.14 REMARK 500 VAL A 51 130.09 72.63 REMARK 500 ILE A 59 -68.40 -92.25 REMARK 500 THR A 153 141.38 -178.84 REMARK 500 GLU A 181 62.51 -108.03 REMARK 500 ASP A 209 75.52 -103.43 REMARK 500 LYS A 233 -9.82 -56.63 REMARK 500 ASN A 265 93.26 -161.74 REMARK 500 VAL A 298 -72.09 -126.30 REMARK 500 THR B 31 -81.66 -32.03 REMARK 500 THR B 48 157.03 -48.74 REMARK 500 VAL B 51 139.62 67.16 REMARK 500 ASP B 52 72.28 -100.65 REMARK 500 ASP B 209 71.95 -100.30 REMARK 500 ASN B 265 96.56 -166.43 REMARK 500 VAL B 298 -79.21 -123.69 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 340 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 51 O REMARK 620 2 GLU A 53 OE1 62.0 REMARK 620 3 GLU A 53 OE2 61.2 47.7 REMARK 620 4 HOH A 349 O 55.4 66.2 103.1 REMARK 620 5 GLY A 50 O 63.6 120.0 84.7 101.1 REMARK 620 6 HOH A 350 O 127.7 151.7 109.6 142.1 64.3 REMARK 620 7 HOH A 439 O 120.1 73.9 114.0 71.1 160.7 110.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 341 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 88 O REMARK 620 2 GLU A 96 OE1 84.1 REMARK 620 3 LEU A 91 O 76.5 78.0 REMARK 620 4 HOH A 351 O 107.9 145.7 74.1 REMARK 620 5 GLU B 36 OE2 81.3 149.6 123.5 64.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 342 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 118 O REMARK 620 2 GLY A 122 O 96.4 REMARK 620 3 ASP A 162 OD1 75.0 132.5 REMARK 620 4 ASP A 162 OD2 70.6 89.5 43.2 REMARK 620 5 GLY A 120 O 77.4 72.1 144.7 140.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 343 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 207 N REMARK 620 2 GLY A 202 O 124.9 REMARK 620 3 GLY A 207 O 54.2 90.0 REMARK 620 4 GLU A 247 OE1 124.3 65.5 73.1 REMARK 620 5 GLU A 247 OE2 159.0 72.8 121.1 48.3 REMARK 620 6 ARG A 205 O 69.5 65.8 83.9 125.5 131.4 REMARK 620 7 HOH A 437 O 118.5 81.2 161.2 117.1 72.1 77.4 REMARK 620 8 HOH A 352 O 55.1 174.7 86.1 109.8 106.2 117.3 103.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 344 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 248 O REMARK 620 2 GLU A 253 OE2 89.6 REMARK 620 3 ARG A 245 O 105.2 78.9 REMARK 620 4 HOH A 347 O 102.3 160.8 83.4 REMARK 620 5 HOH A 348 O 155.1 67.9 61.4 97.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 345 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 282 O REMARK 620 2 ASP A 322 OD2 69.8 REMARK 620 3 MET A 278 O 129.7 87.2 REMARK 620 4 GLY A 280 O 92.6 154.3 90.5 REMARK 620 5 ASP A 322 OD1 114.0 52.1 79.7 152.0 REMARK 620 6 HOH A 354 O 75.9 87.4 149.2 106.9 73.1 REMARK 620 7 SER A 234 OG 149.1 119.6 81.2 85.2 67.5 75.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 346 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 123 O REMARK 620 2 GLU A 125 OE1 63.8 REMARK 620 3 GLU A 125 OE2 71.5 50.1 REMARK 620 4 HOH A 444 O 137.5 76.8 71.1 REMARK 620 5 HOH A 445 O 162.9 133.1 115.7 57.5 REMARK 620 6 HOH A 443 O 84.1 124.0 77.5 106.7 82.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 340 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 50 O REMARK 620 2 GLU B 53 OE2 73.1 REMARK 620 3 HOH B 347 O 104.8 71.1 REMARK 620 4 GLU B 53 OE1 112.0 51.9 93.1 REMARK 620 5 VAL B 51 O 60.3 74.5 145.4 68.3 REMARK 620 6 HOH B 352 O 116.6 113.9 138.0 66.4 62.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 341 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 348 O REMARK 620 2 HOH B 349 O 98.5 REMARK 620 3 GLU B 96 OE1 80.6 142.9 REMARK 620 4 LYS B 88 O 163.0 93.0 82.6 REMARK 620 5 LEU B 91 O 97.5 145.3 70.3 79.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 342 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 120 O REMARK 620 2 GLY B 122 O 86.1 REMARK 620 3 ASP B 162 OD1 145.8 127.9 REMARK 620 4 ASP B 162 OD2 158.4 75.0 54.5 REMARK 620 5 HOH B 353 O 91.7 177.7 54.3 107.3 REMARK 620 6 MET B 118 O 90.5 101.6 85.6 83.3 78.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 343 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 247 OE2 REMARK 620 2 HOH B 354 O 81.5 REMARK 620 3 GLY B 207 O 121.6 90.3 REMARK 620 4 ARG B 205 O 142.6 124.2 88.0 REMARK 620 5 GLY B 202 O 81.3 162.8 98.0 71.5 REMARK 620 6 GLU B 247 OE1 50.4 88.6 71.8 142.1 79.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 344 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 245 O REMARK 620 2 VAL B 248 O 88.0 REMARK 620 3 GLU B 253 OE2 86.4 62.4 REMARK 620 4 HOH B 350 O 77.6 117.8 164.0 REMARK 620 5 HOH B 422 O 101.4 64.9 126.3 59.7 REMARK 620 6 HOH B 351 O 56.5 126.8 75.9 93.8 150.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 345 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 282 O REMARK 620 2 GLY B 280 O 82.2 REMARK 620 3 ASP B 322 OD1 129.4 148.4 REMARK 620 4 ASP B 322 OD2 83.1 153.5 50.6 REMARK 620 5 MET B 278 O 116.8 83.7 81.2 83.4 REMARK 620 6 SER B 234 OG 147.7 77.5 73.8 124.4 85.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 346 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 125 OE1 REMARK 620 2 GLU B 125 OE2 44.8 REMARK 620 3 HOH B 450 O 100.0 102.7 REMARK 620 4 HOH B 453 O 119.5 75.3 83.2 REMARK 620 5 HOH B 452 O 64.2 107.1 103.0 172.5 REMARK 620 6 THR B 123 O 70.2 61.3 163.9 90.5 84.6 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 340 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 341 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 342 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 343 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 344 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 345 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 340 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 341 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 342 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 343 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 344 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 345 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 346 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 346
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1W7B RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE ABSENCE OF CALCIUM IONS
DBREF 1XJL A 21 339 UNP P07355 ANXA2_HUMAN 20 338 DBREF 1XJL B 21 339 UNP P07355 ANXA2_HUMAN 20 338
SEQADV 1XJL GLU A 66 UNP P07355 ALA 65 ENGINEERED SEQADV 1XJL GLU B 66 UNP P07355 ALA 65 ENGINEERED
SEQRES 1 A 319 PRO SER ALA TYR GLY SER VAL LYS ALA TYR THR ASN PHE SEQRES 2 A 319 ASP ALA GLU ARG ASP ALA LEU ASN ILE GLU THR ALA ILE SEQRES 3 A 319 LYS THR LYS GLY VAL ASP GLU VAL THR ILE VAL ASN ILE SEQRES 4 A 319 LEU THR ASN ARG SER ASN GLU GLN ARG GLN ASP ILE ALA SEQRES 5 A 319 PHE ALA TYR GLN ARG ARG THR LYS LYS GLU LEU ALA SER SEQRES 6 A 319 ALA LEU LYS SER ALA LEU SER GLY HIS LEU GLU THR VAL SEQRES 7 A 319 ILE LEU GLY LEU LEU LYS THR PRO ALA GLN TYR ASP ALA SEQRES 8 A 319 SER GLU LEU LYS ALA SER MET LYS GLY LEU GLY THR ASP SEQRES 9 A 319 GLU ASP SER LEU ILE GLU ILE ILE CYS SER ARG THR ASN SEQRES 10 A 319 GLN GLU LEU GLN GLU ILE ASN ARG VAL TYR LYS GLU MET SEQRES 11 A 319 TYR LYS THR ASP LEU GLU LYS ASP ILE ILE SER ASP THR SEQRES 12 A 319 SER GLY ASP PHE ARG LYS LEU MET VAL ALA LEU ALA LYS SEQRES 13 A 319 GLY ARG ARG ALA GLU ASP GLY SER VAL ILE ASP TYR GLU SEQRES 14 A 319 LEU ILE ASP GLN ASP ALA ARG ASP LEU TYR ASP ALA GLY SEQRES 15 A 319 VAL LYS ARG LYS GLY THR ASP VAL PRO LYS TRP ILE SER SEQRES 16 A 319 ILE MET THR GLU ARG SER VAL PRO HIS LEU GLN LYS VAL SEQRES 17 A 319 PHE ASP ARG TYR LYS SER TYR SER PRO TYR ASP MET LEU SEQRES 18 A 319 GLU SER ILE ARG LYS GLU VAL LYS GLY ASP LEU GLU ASN SEQRES 19 A 319 ALA PHE LEU ASN LEU VAL GLN CYS ILE GLN ASN LYS PRO SEQRES 20 A 319 LEU TYR PHE ALA ASP ARG LEU TYR ASP SER MET LYS GLY SEQRES 21 A 319 LYS GLY THR ARG ASP LYS VAL LEU ILE ARG ILE MET VAL SEQRES 22 A 319 SER ARG SER GLU VAL ASP MET LEU LYS ILE ARG SER GLU SEQRES 23 A 319 PHE LYS ARG LYS TYR GLY LYS SER LEU TYR TYR TYR ILE SEQRES 24 A 319 GLN GLN ASP THR LYS GLY ASP TYR GLN LYS ALA LEU LEU SEQRES 25 A 319 TYR LEU CYS GLY GLY ASP ASP SEQRES 1 B 319 PRO SER ALA TYR GLY SER VAL LYS ALA TYR THR ASN PHE SEQRES 2 B 319 ASP ALA GLU ARG ASP ALA LEU ASN ILE GLU THR ALA ILE SEQRES 3 B 319 LYS THR LYS GLY VAL ASP GLU VAL THR ILE VAL ASN ILE SEQRES 4 B 319 LEU THR ASN ARG SER ASN GLU GLN ARG GLN ASP ILE ALA SEQRES 5 B 319 PHE ALA TYR GLN ARG ARG THR LYS LYS GLU LEU ALA SER SEQRES 6 B 319 ALA LEU LYS SER ALA LEU SER GLY HIS LEU GLU THR VAL SEQRES 7 B 319 ILE LEU GLY LEU LEU LYS THR PRO ALA GLN TYR ASP ALA SEQRES 8 B 319 SER GLU LEU LYS ALA SER MET LYS GLY LEU GLY THR ASP SEQRES 9 B 319 GLU ASP SER LEU ILE GLU ILE ILE CYS SER ARG THR ASN SEQRES 10 B 319 GLN GLU LEU GLN GLU ILE ASN ARG VAL TYR LYS GLU MET SEQRES 11 B 319 TYR LYS THR ASP LEU GLU LYS ASP ILE ILE SER ASP THR SEQRES 12 B 319 SER GLY ASP PHE ARG LYS LEU MET VAL ALA LEU ALA LYS SEQRES 13 B 319 GLY ARG ARG ALA GLU ASP GLY SER VAL ILE ASP TYR GLU SEQRES 14 B 319 LEU ILE ASP GLN ASP ALA ARG ASP LEU TYR ASP ALA GLY SEQRES 15 B 319 VAL LYS ARG LYS GLY THR ASP VAL PRO LYS TRP ILE SER SEQRES 16 B 319 ILE MET THR GLU ARG SER VAL PRO HIS LEU GLN LYS VAL SEQRES 17 B 319 PHE ASP ARG TYR LYS SER TYR SER PRO TYR ASP MET LEU SEQRES 18 B 319 GLU SER ILE ARG LYS GLU VAL LYS GLY ASP LEU GLU ASN SEQRES 19 B 319 ALA PHE LEU ASN LEU VAL GLN CYS ILE GLN ASN LYS PRO SEQRES 20 B 319 LEU TYR PHE ALA ASP ARG LEU TYR ASP SER MET LYS GLY SEQRES 21 B 319 LYS GLY THR ARG ASP LYS VAL LEU ILE ARG ILE MET VAL SEQRES 22 B 319 SER ARG SER GLU VAL ASP MET LEU LYS ILE ARG SER GLU SEQRES 23 B 319 PHE LYS ARG LYS TYR GLY LYS SER LEU TYR TYR TYR ILE SEQRES 24 B 319 GLN GLN ASP THR LYS GLY ASP TYR GLN LYS ALA LEU LEU SEQRES 25 B 319 TYR LEU CYS GLY GLY ASP ASP
HET CA A 340 1 HET CA A 341 1 HET CA A 342 1 HET CA A 343 1 HET CA A 344 1 HET CA A 345 1 HET CA B 340 1 HET CA B 341 1 HET CA B 342 1 HET CA B 343 1 HET CA B 344 1 HET CA B 345 1 HET CA A 346 1 HET CA B 346 1
HETNAM CA CALCIUM ION
FORMUL 3 CA 14(CA 2+) FORMUL 17 HOH *212(H2 O)
HELIX 1 1 ASP A 34 THR A 48 1 15 HELIX 2 2 ASP A 52 THR A 61 1 10 HELIX 3 3 SER A 64 LYS A 80 1 17 HELIX 4 4 GLU A 82 LEU A 91 1 10 HELIX 5 5 SER A 92 LYS A 104 1 13 HELIX 6 6 THR A 105 LYS A 119 1 15 HELIX 7 7 ASP A 124 ARG A 135 1 12 HELIX 8 8 THR A 136 LYS A 152 1 17 HELIX 9 9 ASP A 154 THR A 163 1 10 HELIX 10 10 SER A 164 LYS A 176 1 13 HELIX 11 11 ASP A 187 ALA A 201 1 15 HELIX 12 12 ASP A 209 ARG A 220 1 12 HELIX 13 13 SER A 221 LYS A 233 1 13 HELIX 14 14 ASP A 239 VAL A 248 1 10 HELIX 15 15 LYS A 249 LYS A 279 1 31 HELIX 16 16 ARG A 284 SER A 296 1 13 HELIX 17 17 ASP A 299 GLY A 312 1 14 HELIX 18 18 SER A 314 THR A 323 1 10 HELIX 19 19 LYS A 324 GLY A 336 1 13 HELIX 20 20 ASP B 34 THR B 48 1 15 HELIX 21 21 ASP B 52 THR B 61 1 10 HELIX 22 22 SER B 64 LYS B 80 1 17 HELIX 23 23 GLU B 82 LEU B 91 1 10 HELIX 24 24 SER B 92 LYS B 104 1 13 HELIX 25 25 THR B 105 LYS B 119 1 15 HELIX 26 26 ASP B 124 ARG B 135 1 12 HELIX 27 27 THR B 136 LYS B 152 1 17 HELIX 28 28 ASP B 154 THR B 163 1 10 HELIX 29 29 SER B 164 GLY B 177 1 14 HELIX 30 30 ASP B 187 ALA B 201 1 15 HELIX 31 31 ASP B 209 ARG B 220 1 12 HELIX 32 32 SER B 221 SER B 236 1 16 HELIX 33 33 ASP B 239 VAL B 248 1 10 HELIX 34 34 LYS B 249 ASN B 265 1 17 HELIX 35 35 ASN B 265 LYS B 279 1 15 HELIX 36 36 ARG B 284 ARG B 295 1 12 HELIX 37 37 ASP B 299 GLY B 312 1 14 HELIX 38 38 SER B 314 THR B 323 1 10 HELIX 39 39 LYS B 324 GLY B 336 1 13
LINK CA CA A 340 O VAL A 51 1555 1555 2.84 LINK CA CA A 340 OE1 GLU A 53 1555 1555 2.95 LINK CA CA A 340 OE2 GLU A 53 1555 1555 2.22 LINK CA CA A 340 O HOH A 349 1555 1555 2.31 LINK CA CA A 340 O GLY A 50 1555 1555 2.48 LINK CA CA A 340 O HOH A 350 1555 1555 2.48 LINK CA CA A 340 O HOH A 439 1555 1555 2.29 LINK CA CA A 341 O LYS A 88 1555 1555 2.39 LINK CA CA A 341 OE1 GLU A 96 1555 1555 2.38 LINK CA CA A 341 O LEU A 91 1555 1555 2.42 LINK CA CA A 341 O HOH A 351 1555 1555 2.52 LINK CA CA A 342 O MET A 118 1555 1555 2.40 LINK CA CA A 342 O GLY A 122 1555 1555 2.48 LINK CA CA A 342 OD1 ASP A 162 1555 1555 3.21 LINK CA CA A 342 OD2 ASP A 162 1555 1555 2.19 LINK CA CA A 342 O GLY A 120 1555 1555 2.66 LINK CA CA A 343 N GLY A 207 1555 1555 3.37 LINK CA CA A 343 O GLY A 202 1555 1555 2.87 LINK CA CA A 343 O GLY A 207 1555 1555 2.29 LINK CA CA A 343 OE1 GLU A 247 1555 1555 2.58 LINK CA CA A 343 OE2 GLU A 247 1555 1555 2.77 LINK CA CA A 343 O ARG A 205 1555 1555 2.29 LINK CA CA A 343 O HOH A 437 1555 1555 2.25 LINK CA CA A 343 O HOH A 352 1555 1555 2.68 LINK CA CA A 344 O VAL A 248 1555 1555 2.35 LINK CA CA A 344 OE2 GLU A 253 1555 1555 2.46 LINK CA CA A 344 O ARG A 245 1555 1555 2.66 LINK CA CA A 344 O HOH A 347 1555 1555 2.41 LINK CA CA A 344 O HOH A 348 1555 1555 3.19 LINK CA CA A 345 O GLY A 282 1555 1555 2.40 LINK CA CA A 345 OD2 ASP A 322 1555 1555 2.54 LINK CA CA A 345 O MET A 278 1555 1555 2.40 LINK CA CA A 345 O GLY A 280 1555 1555 2.20 LINK CA CA A 345 OD1 ASP A 322 1555 1555 2.47 LINK CA CA A 345 O HOH A 354 1555 1555 2.22 LINK CA CA A 346 O THR A 123 1555 1555 2.39 LINK CA CA A 346 OE1 GLU A 125 1555 1555 2.44 LINK CA CA A 346 OE2 GLU A 125 1555 1555 2.72 LINK CA CA A 346 O HOH A 444 1555 1555 2.40 LINK CA CA A 346 O HOH A 445 1555 1555 2.61 LINK CA CA A 346 O HOH A 443 1555 1555 2.34 LINK CA CA B 340 O GLY B 50 1555 1555 2.27 LINK CA CA B 340 OE2 GLU B 53 1555 1555 2.55 LINK CA CA B 340 O HOH B 347 1555 1555 2.32 LINK CA CA B 340 OE1 GLU B 53 1555 1555 2.49 LINK CA CA B 340 O VAL B 51 1555 1555 2.87 LINK CA CA B 340 O HOH B 352 1555 1555 2.27 LINK CA CA B 341 O HOH B 348 1555 1555 2.70 LINK CA CA B 341 O HOH B 349 1555 1555 2.69 LINK CA CA B 341 OE1 GLU B 96 1555 1555 2.40 LINK CA CA B 341 O LYS B 88 1555 1555 2.34 LINK CA CA B 341 O LEU B 91 1555 1555 2.49 LINK CA CA B 342 O GLY B 120 1555 1555 2.32 LINK CA CA B 342 O GLY B 122 1555 1555 2.36 LINK CA CA B 342 OD1 ASP B 162 1555 1555 2.53 LINK CA CA B 342 OD2 ASP B 162 1555 1555 2.22 LINK CA CA B 342 O HOH B 353 1555 1555 2.89 LINK CA CA B 342 O MET B 118 1555 1555 2.45 LINK CA CA B 343 OE2 GLU B 247 1555 1555 2.64 LINK CA CA B 343 O HOH B 354 1555 1555 2.56 LINK CA CA B 343 O GLY B 207 1555 1555 2.38 LINK CA CA B 343 O ARG B 205 1555 1555 2.12 LINK CA CA B 343 O GLY B 202 1555 1555 2.50 LINK CA CA B 343 OE1 GLU B 247 1555 1555 2.51 LINK CA CA B 344 O ARG B 245 1555 1555 2.67 LINK CA CA B 344 O VAL B 248 1555 1555 2.44 LINK CA CA B 344 OE2 GLU B 253 1555 1555 2.70 LINK CA CA B 344 O HOH B 350 1555 1555 2.66 LINK CA CA B 344 O HOH B 422 1555 1555 3.07 LINK CA CA B 344 O HOH B 351 1555 1555 2.63 LINK CA CA B 345 O GLY B 282 1555 1555 2.37 LINK CA CA B 345 O GLY B 280 1555 1555 2.41 LINK CA CA B 345 OD1 ASP B 322 1555 1555 2.77 LINK CA CA B 345 OD2 ASP B 322 1555 1555 2.24 LINK CA CA B 345 O MET B 278 1555 1555 2.38 LINK CA CA B 346 OE1 GLU B 125 1555 1555 3.09 LINK CA CA B 346 OE2 GLU B 125 1555 1555 2.50 LINK CA CA B 346 O HOH B 450 1555 1555 2.67 LINK CA CA B 346 O HOH B 453 1555 1555 2.36 LINK CA CA B 346 O HOH B 452 1555 1555 2.36 LINK CA CA B 346 O THR B 123 1555 1555 2.57 LINK CA CA A 341 OE2 GLU B 36 1555 3555 2.96 LINK CA CA A 345 OG SER A 234 1555 4566 2.58 LINK CA CA B 345 OG SER B 234 1555 4456 2.57
SITE 1 AC1 6 GLY A 50 VAL A 51 GLU A 53 HOH A 349 SITE 2 AC1 6 HOH A 350 HOH A 439 SITE 1 AC2 5 LYS A 88 LEU A 91 GLU A 96 HOH A 351 SITE 2 AC2 5 GLU B 36 SITE 1 AC3 4 MET A 118 GLY A 120 GLY A 122 ASP A 162 SITE 1 AC4 6 GLY A 202 ARG A 205 GLY A 207 GLU A 247 SITE 2 AC4 6 HOH A 352 HOH A 437 SITE 1 AC5 4 ARG A 245 VAL A 248 GLU A 253 HOH A 347 SITE 1 AC6 6 SER A 234 MET A 278 GLY A 280 GLY A 282 SITE 2 AC6 6 ASP A 322 HOH A 354 SITE 1 AC7 5 GLY B 50 VAL B 51 GLU B 53 HOH B 347 SITE 2 AC7 5 HOH B 352 SITE 1 AC8 5 LYS B 88 LEU B 91 GLU B 96 HOH B 348 SITE 2 AC8 5 HOH B 349 SITE 1 AC9 5 MET B 118 GLY B 120 GLY B 122 ASP B 162 SITE 2 AC9 5 HOH B 353 SITE 1 BC1 5 GLY B 202 ARG B 205 GLY B 207 GLU B 247 SITE 2 BC1 5 HOH B 354 SITE 1 BC2 6 ARG B 245 VAL B 248 GLU B 253 HOH B 350 SITE 2 BC2 6 HOH B 351 HOH B 422 SITE 1 BC3 5 SER B 234 MET B 278 GLY B 280 GLY B 282 SITE 2 BC3 5 ASP B 322 SITE 1 BC4 5 THR A 123 GLU A 125 HOH A 443 HOH A 444 SITE 2 BC4 5 HOH A 445 SITE 1 BC5 5 THR B 123 GLU B 125 HOH B 450 HOH B 452 SITE 2 BC5 5 HOH B 453
CRYST1 61.781 98.105 176.273 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016186 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010193 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005673 0.00000