10 20 30 40 50 60 70 80 1XIM - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ISOMERASE(INTRAMOLECULAR OXIDOREDUCTSE) 29-MAY-91 1XIM
TITLE ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-XYLOSE ISOMERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 5.3.1.5; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINOPLANES MISSOURIENSIS; SOURCE 3 ORGANISM_TAXID: 1866
KEYWDS ISOMERASE(INTRAMOLECULAR OXIDOREDUCTSE)
EXPDTA X-RAY DIFFRACTION
AUTHOR N.T.MRABET,A.VAN DENBROEK,I.VAN DEN BRANDE,P.STANSSENS, AUTHOR 2 Y.LAROCHE,A.-M.LAMBEIR,G.MATTHYSSENS,J.JENKINS,M.CHIADMI, AUTHOR 3 H.VANTILBEURGH,F.REY,J.JANIN,W.J.QUAX,I.LASTERS,M.DEMAEYER, AUTHOR 4 S.J.WODAK
REVDAT 3 24-FEB-09 1XIM 1 VERSN REVDAT 2 01-APR-03 1XIM 1 JRNL REVDAT 1 15-APR-93 1XIM 0
JRNL AUTH N.T.MRABET,A.VAN DEN BROECK,I.VAN DEN BRANDE, JRNL AUTH 2 P.STANSSENS,Y.LAROCHE,A.M.LAMBEIR,G.MATTHIJSSENS, JRNL AUTH 3 J.JENKINS,M.CHIADMI,H.VAN TILBEURGH,F.REY,J.JANIN, JRNL AUTH 4 W.J.QUAX,I.LASTERS,M.DEMAEYER,S.J.WODAK JRNL TITL ARGININE RESIDUES AS STABILIZING ELEMENTS IN JRNL TITL 2 PROTEINS. JRNL REF BIOCHEMISTRY V. 31 2239 1992 JRNL REFN ISSN 0006-2960 JRNL PMID 1540579 JRNL DOI 10.1021/BI00123A005
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.REY,J.JENKINS,J.JANIN,I.LASTERS,P.ALARD, REMARK 1 AUTH 2 M.CLAESSENS,G.MATTHYSSENS,S.WODAK REMARK 1 TITL STRUCTURAL ANALYSIS OF THE 2.8 ANGSTROMS MODEL OF REMARK 1 TITL 2 XYLOSE ISOMERASE FROM ACTINOPLANES MISSOURIENSIS REMARK 1 REF PROTEINS V. 4 165 1988 REMARK 1 REFN ISSN 0887-3585
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 113145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12212 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 881 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.011 ; NULL REMARK 3 ANGLE DISTANCE (A) : 0.038 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.037 ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.010 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.127 ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : 0.266 ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1XIM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 154.33333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.16667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 77.16667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 154.33333 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 34390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -215.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2 REMARK 465 SER B 2 REMARK 465 SER C 2 REMARK 465 SER D 2
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 4 CG CD OE1 NE2 REMARK 470 GLN A 66 CG CD OE1 NE2 REMARK 470 ASP A 280 CG OD1 OD2 REMARK 470 GLN B 4 CG CD OE1 NE2 REMARK 470 GLN B 66 CG CD OE1 NE2 REMARK 470 ASP B 280 CG OD1 OD2 REMARK 470 GLN C 4 CG CD OE1 NE2 REMARK 470 GLN C 66 CG CD OE1 NE2 REMARK 470 ASP C 280 CG OD1 OD2 REMARK 470 GLN D 4 CG CD OE1 NE2 REMARK 470 GLN D 66 CG CD OE1 NE2 REMARK 470 ASP D 280 CG OD1 OD2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 204 OE1 GLN D 204 1.54 REMARK 500 OE1 GLN A 204 OE1 GLN C 204 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 7 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 23 NE - CZ - NH1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 23 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP A 55 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 55 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 68 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP A 80 CA - CB - CG ANGL. DEV. = -16.3 DEGREES REMARK 500 ASP A 80 CB - CG - OD1 ANGL. DEV. = -8.9 DEGREES REMARK 500 ARG A 109 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 113 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 117 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 117 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 121 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 121 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP A 124 CB - CG - OD1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ASP A 146 CB - CG - OD1 ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP A 150 CB - CG - OD1 ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG A 157 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 TYR A 158 CB - CG - CD2 ANGL. DEV. = 4.6 DEGREES REMARK 500 ASP A 171 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 172 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 172 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG A 188 CD - NE - CZ ANGL. DEV. = 12.9 DEGREES REMARK 500 GLU A 205 OE1 - CD - OE2 ANGL. DEV. = -11.2 DEGREES REMARK 500 GLU A 205 CG - CD - OE2 ANGL. DEV. = 13.9 DEGREES REMARK 500 ASP A 245 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 255 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 255 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 273 CB - CG - OD1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ASP A 300 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG A 321 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG A 326 NE - CZ - NH1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG A 326 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 ASP A 328 CB - CG - OD2 ANGL. DEV. = 9.5 DEGREES REMARK 500 ARG A 361 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 394 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 ARG A 394 NH1 - CZ - NH2 ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG A 394 NE - CZ - NH1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 394 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 31 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG B 68 NE - CZ - NH1 ANGL. DEV. = -4.9 DEGREES REMARK 500 ASP B 80 CB - CG - OD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP B 101 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 109 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 112 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 112 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 113 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 117 NE - CZ - NH1 ANGL. DEV. = 7.9 DEGREES REMARK 500 ARG B 117 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 121 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 124 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 17 -76.99 -82.79 REMARK 500 ASP A 24 -169.37 -101.46 REMARK 500 GLU A 186 106.40 77.10 REMARK 500 ASN A 247 -174.38 -170.15 REMARK 500 HIS A 250 73.27 -112.27 REMARK 500 PHE A 364 -73.73 -160.40 REMARK 500 THR B 17 -75.99 -79.55 REMARK 500 ALA B 22 34.66 74.50 REMARK 500 GLU B 186 108.25 70.97 REMARK 500 LEU B 193 62.40 66.77 REMARK 500 HIS B 250 72.11 -113.03 REMARK 500 PRO B 252 96.68 -65.87 REMARK 500 ASP B 280 46.68 74.26 REMARK 500 PHE B 364 -77.83 -157.43 REMARK 500 THR C 17 -72.39 -85.26 REMARK 500 GLU C 186 110.79 73.91 REMARK 500 LEU C 193 65.49 62.39 REMARK 500 ASN C 247 -171.69 -171.00 REMARK 500 HIS C 250 77.58 -110.89 REMARK 500 PRO C 279 -73.02 -27.28 REMARK 500 ASP C 280 -92.94 -64.97 REMARK 500 ASP C 300 -167.82 -102.15 REMARK 500 PHE C 364 -66.25 -167.62 REMARK 500 THR D 17 -76.90 -82.84 REMARK 500 ALA D 22 38.90 72.30 REMARK 500 ASP D 24 -167.93 -101.74 REMARK 500 PHE D 94 -23.83 -140.88 REMARK 500 GLU D 186 107.10 77.30 REMARK 500 LEU D 193 63.50 60.85 REMARK 500 HIS D 250 77.62 -110.71 REMARK 500 ASN D 277 57.73 -101.37 REMARK 500 ASP D 280 41.10 80.61 REMARK 500 PRO D 346 151.15 -49.89 REMARK 500 PHE D 364 -71.15 -160.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 23 0.19 SIDE_CHAIN REMARK 500 ARG A 172 0.12 SIDE_CHAIN REMARK 500 ARG B 172 0.23 SIDE_CHAIN REMARK 500 ARG B 177 0.17 SIDE_CHAIN REMARK 500 ARG C 172 0.20 SIDE_CHAIN REMARK 500 ARG C 177 0.17 SIDE_CHAIN REMARK 500 ARG D 208 0.19 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 395 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 292 OD2 REMARK 620 2 GLU A 217 OE1 92.5 REMARK 620 3 XYL A 397 O2 85.2 82.8 REMARK 620 4 XYL A 397 O4 85.6 163.8 81.0 REMARK 620 5 GLU A 181 OE2 161.7 101.0 84.3 77.9 REMARK 620 6 ASP A 245 OD2 93.2 102.5 174.5 93.7 95.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 396 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 217 OE2 REMARK 620 2 HIS A 220 NE2 70.9 REMARK 620 3 ASP A 255 OD1 93.8 103.3 REMARK 620 4 HOH A 541 O 88.4 121.1 133.5 REMARK 620 5 ASP A 255 OD2 146.2 108.8 52.7 117.1 REMARK 620 6 XYL A 397 O1 127.6 68.6 126.5 85.4 79.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 395 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 XYL B 397 O4 REMARK 620 2 GLU B 181 OE2 89.3 REMARK 620 3 ASP B 245 OD2 94.8 91.7 REMARK 620 4 XYL B 397 O2 81.0 93.6 173.3 REMARK 620 5 ASP B 292 OD2 82.7 169.8 95.4 78.9 REMARK 620 6 GLU B 217 OE1 169.5 94.7 94.7 89.0 92.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 396 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 255 OD2 REMARK 620 2 XYL B 397 O1 79.6 REMARK 620 3 HOH B 537 O 118.4 83.6 REMARK 620 4 GLU B 217 OE2 154.1 121.8 81.0 REMARK 620 5 HIS B 220 NE2 108.3 72.3 121.8 69.6 REMARK 620 6 ASP B 255 OD1 53.9 129.4 133.1 100.6 101.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO C 395 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 217 OE1 REMARK 620 2 ASP C 245 OD2 100.1 REMARK 620 3 XYL C 397 O2 92.1 167.4 REMARK 620 4 XYL C 397 O4 165.7 94.0 73.7 REMARK 620 5 ASP C 292 OD2 92.8 91.5 84.6 84.2 REMARK 620 6 GLU C 181 OE2 100.1 96.5 84.4 80.7 163.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO C 396 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 217 OE2 REMARK 620 2 ASP C 255 OD1 98.5 REMARK 620 3 ASP C 255 OD2 154.9 56.7 REMARK 620 4 HOH C 552 O 87.4 135.6 112.4 REMARK 620 5 ASP C 257 OD1 83.6 68.9 89.5 68.1 REMARK 620 6 HIS C 220 NE2 73.3 107.4 108.6 116.3 155.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO D 395 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 245 OD2 REMARK 620 2 XYL D 397 O4 88.0 REMARK 620 3 GLU D 217 OE1 103.5 168.5 REMARK 620 4 ASP D 292 OD2 94.0 87.3 92.0 REMARK 620 5 XYL D 397 O2 170.9 83.1 85.4 87.6 REMARK 620 6 GLU D 181 OE2 92.8 76.0 102.9 161.7 83.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO D 396 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 217 OE2 REMARK 620 2 ASP D 255 OD1 83.3 REMARK 620 3 ASP D 255 OD2 128.0 51.9 REMARK 620 4 HOH D 548 O 99.9 144.5 131.6 REMARK 620 5 ASP D 257 OD1 86.0 70.3 99.5 74.7 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE XYL A 397 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE XYL B 397 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE XYL C 397 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE XYL D 397 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 395 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 396 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 395 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 396 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO C 395 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO C 396 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO D 395 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO D 396
DBREF 1XIM A 2 394 UNP P12851 XYLA_ACTMI 1 393 DBREF 1XIM B 2 394 UNP P12851 XYLA_ACTMI 1 393 DBREF 1XIM C 2 394 UNP P12851 XYLA_ACTMI 1 393 DBREF 1XIM D 2 394 UNP P12851 XYLA_ACTMI 1 393
SEQRES 1 A 393 SER VAL GLN ALA THR ARG GLU ASP LYS PHE SER PHE GLY SEQRES 2 A 393 LEU TRP THR VAL GLY TRP GLN ALA ARG ASP ALA PHE GLY SEQRES 3 A 393 ASP ALA THR ARG THR ALA LEU ASP PRO VAL GLU ALA VAL SEQRES 4 A 393 HIS LYS LEU ALA GLU ILE GLY ALA TYR GLY ILE THR PHE SEQRES 5 A 393 HIS ASP ASP ASP LEU VAL PRO PHE GLY SER ASP ALA GLN SEQRES 6 A 393 THR ARG ASP GLY ILE ILE ALA GLY PHE LYS LYS ALA LEU SEQRES 7 A 393 ASP GLU THR GLY LEU ILE VAL PRO MET VAL THR THR ASN SEQRES 8 A 393 LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE THR SEQRES 9 A 393 SER ASN ASP ARG SER VAL ARG ARG TYR ALA ILE ARG LYS SEQRES 10 A 393 VAL LEU ARG GLN MET ASP LEU GLY ALA GLU LEU GLY ALA SEQRES 11 A 393 LYS THR LEU VAL LEU TRP GLY GLY ARG GLU GLY ALA GLU SEQRES 12 A 393 TYR ASP SER ALA LYS ASP VAL SER ALA ALA LEU ASP ARG SEQRES 13 A 393 TYR ARG GLU ALA LEU ASN LEU LEU ALA GLN TYR SER GLU SEQRES 14 A 393 ASP ARG GLY TYR GLY LEU ARG PHE ALA ILE GLU PRO LYS SEQRES 15 A 393 PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR ALA SEQRES 16 A 393 GLY HIS ALA ILE ALA PHE VAL GLN GLU LEU GLU ARG PRO SEQRES 17 A 393 GLU LEU PHE GLY ILE ASN PRO GLU THR GLY HIS GLU GLN SEQRES 18 A 393 MET SER ASN LEU ASN PHE THR GLN GLY ILE ALA GLN ALA SEQRES 19 A 393 LEU TRP HIS LYS LYS LEU PHE HIS ILE ASP LEU ASN GLY SEQRES 20 A 393 GLN HIS GLY PRO LYS PHE ASP GLN ASP LEU VAL PHE GLY SEQRES 21 A 393 HIS GLY ASP LEU LEU ASN ALA PHE SER LEU VAL ASP LEU SEQRES 22 A 393 LEU GLU ASN GLY PRO ASP GLY ALA PRO ALA TYR ASP GLY SEQRES 23 A 393 PRO ARG HIS PHE ASP TYR LYS PRO SER ARG THR GLU ASP SEQRES 24 A 393 TYR ASP GLY VAL TRP GLU SER ALA LYS ALA ASN ILE ARG SEQRES 25 A 393 MET TYR LEU LEU LEU LYS GLU ARG ALA LYS ALA PHE ARG SEQRES 26 A 393 ALA ASP PRO GLU VAL GLN GLU ALA LEU ALA ALA SER LYS SEQRES 27 A 393 VAL ALA GLU LEU LYS THR PRO THR LEU ASN PRO GLY GLU SEQRES 28 A 393 GLY TYR ALA GLU LEU LEU ALA ASP ARG SER ALA PHE GLU SEQRES 29 A 393 ASP TYR ASP ALA ASP ALA VAL GLY ALA LYS GLY PHE GLY SEQRES 30 A 393 PHE VAL LYS LEU ASN GLN LEU ALA ILE GLU HIS LEU LEU SEQRES 31 A 393 GLY ALA ARG SEQRES 1 B 393 SER VAL GLN ALA THR ARG GLU ASP LYS PHE SER PHE GLY SEQRES 2 B 393 LEU TRP THR VAL GLY TRP GLN ALA ARG ASP ALA PHE GLY SEQRES 3 B 393 ASP ALA THR ARG THR ALA LEU ASP PRO VAL GLU ALA VAL SEQRES 4 B 393 HIS LYS LEU ALA GLU ILE GLY ALA TYR GLY ILE THR PHE SEQRES 5 B 393 HIS ASP ASP ASP LEU VAL PRO PHE GLY SER ASP ALA GLN SEQRES 6 B 393 THR ARG ASP GLY ILE ILE ALA GLY PHE LYS LYS ALA LEU SEQRES 7 B 393 ASP GLU THR GLY LEU ILE VAL PRO MET VAL THR THR ASN SEQRES 8 B 393 LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE THR SEQRES 9 B 393 SER ASN ASP ARG SER VAL ARG ARG TYR ALA ILE ARG LYS SEQRES 10 B 393 VAL LEU ARG GLN MET ASP LEU GLY ALA GLU LEU GLY ALA SEQRES 11 B 393 LYS THR LEU VAL LEU TRP GLY GLY ARG GLU GLY ALA GLU SEQRES 12 B 393 TYR ASP SER ALA LYS ASP VAL SER ALA ALA LEU ASP ARG SEQRES 13 B 393 TYR ARG GLU ALA LEU ASN LEU LEU ALA GLN TYR SER GLU SEQRES 14 B 393 ASP ARG GLY TYR GLY LEU ARG PHE ALA ILE GLU PRO LYS SEQRES 15 B 393 PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR ALA SEQRES 16 B 393 GLY HIS ALA ILE ALA PHE VAL GLN GLU LEU GLU ARG PRO SEQRES 17 B 393 GLU LEU PHE GLY ILE ASN PRO GLU THR GLY HIS GLU GLN SEQRES 18 B 393 MET SER ASN LEU ASN PHE THR GLN GLY ILE ALA GLN ALA SEQRES 19 B 393 LEU TRP HIS LYS LYS LEU PHE HIS ILE ASP LEU ASN GLY SEQRES 20 B 393 GLN HIS GLY PRO LYS PHE ASP GLN ASP LEU VAL PHE GLY SEQRES 21 B 393 HIS GLY ASP LEU LEU ASN ALA PHE SER LEU VAL ASP LEU SEQRES 22 B 393 LEU GLU ASN GLY PRO ASP GLY ALA PRO ALA TYR ASP GLY SEQRES 23 B 393 PRO ARG HIS PHE ASP TYR LYS PRO SER ARG THR GLU ASP SEQRES 24 B 393 TYR ASP GLY VAL TRP GLU SER ALA LYS ALA ASN ILE ARG SEQRES 25 B 393 MET TYR LEU LEU LEU LYS GLU ARG ALA LYS ALA PHE ARG SEQRES 26 B 393 ALA ASP PRO GLU VAL GLN GLU ALA LEU ALA ALA SER LYS SEQRES 27 B 393 VAL ALA GLU LEU LYS THR PRO THR LEU ASN PRO GLY GLU SEQRES 28 B 393 GLY TYR ALA GLU LEU LEU ALA ASP ARG SER ALA PHE GLU SEQRES 29 B 393 ASP TYR ASP ALA ASP ALA VAL GLY ALA LYS GLY PHE GLY SEQRES 30 B 393 PHE VAL LYS LEU ASN GLN LEU ALA ILE GLU HIS LEU LEU SEQRES 31 B 393 GLY ALA ARG SEQRES 1 C 393 SER VAL GLN ALA THR ARG GLU ASP LYS PHE SER PHE GLY SEQRES 2 C 393 LEU TRP THR VAL GLY TRP GLN ALA ARG ASP ALA PHE GLY SEQRES 3 C 393 ASP ALA THR ARG THR ALA LEU ASP PRO VAL GLU ALA VAL SEQRES 4 C 393 HIS LYS LEU ALA GLU ILE GLY ALA TYR GLY ILE THR PHE SEQRES 5 C 393 HIS ASP ASP ASP LEU VAL PRO PHE GLY SER ASP ALA GLN SEQRES 6 C 393 THR ARG ASP GLY ILE ILE ALA GLY PHE LYS LYS ALA LEU SEQRES 7 C 393 ASP GLU THR GLY LEU ILE VAL PRO MET VAL THR THR ASN SEQRES 8 C 393 LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE THR SEQRES 9 C 393 SER ASN ASP ARG SER VAL ARG ARG TYR ALA ILE ARG LYS SEQRES 10 C 393 VAL LEU ARG GLN MET ASP LEU GLY ALA GLU LEU GLY ALA SEQRES 11 C 393 LYS THR LEU VAL LEU TRP GLY GLY ARG GLU GLY ALA GLU SEQRES 12 C 393 TYR ASP SER ALA LYS ASP VAL SER ALA ALA LEU ASP ARG SEQRES 13 C 393 TYR ARG GLU ALA LEU ASN LEU LEU ALA GLN TYR SER GLU SEQRES 14 C 393 ASP ARG GLY TYR GLY LEU ARG PHE ALA ILE GLU PRO LYS SEQRES 15 C 393 PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR ALA SEQRES 16 C 393 GLY HIS ALA ILE ALA PHE VAL GLN GLU LEU GLU ARG PRO SEQRES 17 C 393 GLU LEU PHE GLY ILE ASN PRO GLU THR GLY HIS GLU GLN SEQRES 18 C 393 MET SER ASN LEU ASN PHE THR GLN GLY ILE ALA GLN ALA SEQRES 19 C 393 LEU TRP HIS LYS LYS LEU PHE HIS ILE ASP LEU ASN GLY SEQRES 20 C 393 GLN HIS GLY PRO LYS PHE ASP GLN ASP LEU VAL PHE GLY SEQRES 21 C 393 HIS GLY ASP LEU LEU ASN ALA PHE SER LEU VAL ASP LEU SEQRES 22 C 393 LEU GLU ASN GLY PRO ASP GLY ALA PRO ALA TYR ASP GLY SEQRES 23 C 393 PRO ARG HIS PHE ASP TYR LYS PRO SER ARG THR GLU ASP SEQRES 24 C 393 TYR ASP GLY VAL TRP GLU SER ALA LYS ALA ASN ILE ARG SEQRES 25 C 393 MET TYR LEU LEU LEU LYS GLU ARG ALA LYS ALA PHE ARG SEQRES 26 C 393 ALA ASP PRO GLU VAL GLN GLU ALA LEU ALA ALA SER LYS SEQRES 27 C 393 VAL ALA GLU LEU LYS THR PRO THR LEU ASN PRO GLY GLU SEQRES 28 C 393 GLY TYR ALA GLU LEU LEU ALA ASP ARG SER ALA PHE GLU SEQRES 29 C 393 ASP TYR ASP ALA ASP ALA VAL GLY ALA LYS GLY PHE GLY SEQRES 30 C 393 PHE VAL LYS LEU ASN GLN LEU ALA ILE GLU HIS LEU LEU SEQRES 31 C 393 GLY ALA ARG SEQRES 1 D 393 SER VAL GLN ALA THR ARG GLU ASP LYS PHE SER PHE GLY SEQRES 2 D 393 LEU TRP THR VAL GLY TRP GLN ALA ARG ASP ALA PHE GLY SEQRES 3 D 393 ASP ALA THR ARG THR ALA LEU ASP PRO VAL GLU ALA VAL SEQRES 4 D 393 HIS LYS LEU ALA GLU ILE GLY ALA TYR GLY ILE THR PHE SEQRES 5 D 393 HIS ASP ASP ASP LEU VAL PRO PHE GLY SER ASP ALA GLN SEQRES 6 D 393 THR ARG ASP GLY ILE ILE ALA GLY PHE LYS LYS ALA LEU SEQRES 7 D 393 ASP GLU THR GLY LEU ILE VAL PRO MET VAL THR THR ASN SEQRES 8 D 393 LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE THR SEQRES 9 D 393 SER ASN ASP ARG SER VAL ARG ARG TYR ALA ILE ARG LYS SEQRES 10 D 393 VAL LEU ARG GLN MET ASP LEU GLY ALA GLU LEU GLY ALA SEQRES 11 D 393 LYS THR LEU VAL LEU TRP GLY GLY ARG GLU GLY ALA GLU SEQRES 12 D 393 TYR ASP SER ALA LYS ASP VAL SER ALA ALA LEU ASP ARG SEQRES 13 D 393 TYR ARG GLU ALA LEU ASN LEU LEU ALA GLN TYR SER GLU SEQRES 14 D 393 ASP ARG GLY TYR GLY LEU ARG PHE ALA ILE GLU PRO LYS SEQRES 15 D 393 PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR ALA SEQRES 16 D 393 GLY HIS ALA ILE ALA PHE VAL GLN GLU LEU GLU ARG PRO SEQRES 17 D 393 GLU LEU PHE GLY ILE ASN PRO GLU THR GLY HIS GLU GLN SEQRES 18 D 393 MET SER ASN LEU ASN PHE THR GLN GLY ILE ALA GLN ALA SEQRES 19 D 393 LEU TRP HIS LYS LYS LEU PHE HIS ILE ASP LEU ASN GLY SEQRES 20 D 393 GLN HIS GLY PRO LYS PHE ASP GLN ASP LEU VAL PHE GLY SEQRES 21 D 393 HIS GLY ASP LEU LEU ASN ALA PHE SER LEU VAL ASP LEU SEQRES 22 D 393 LEU GLU ASN GLY PRO ASP GLY ALA PRO ALA TYR ASP GLY SEQRES 23 D 393 PRO ARG HIS PHE ASP TYR LYS PRO SER ARG THR GLU ASP SEQRES 24 D 393 TYR ASP GLY VAL TRP GLU SER ALA LYS ALA ASN ILE ARG SEQRES 25 D 393 MET TYR LEU LEU LEU LYS GLU ARG ALA LYS ALA PHE ARG SEQRES 26 D 393 ALA ASP PRO GLU VAL GLN GLU ALA LEU ALA ALA SER LYS SEQRES 27 D 393 VAL ALA GLU LEU LYS THR PRO THR LEU ASN PRO GLY GLU SEQRES 28 D 393 GLY TYR ALA GLU LEU LEU ALA ASP ARG SER ALA PHE GLU SEQRES 29 D 393 ASP TYR ASP ALA ASP ALA VAL GLY ALA LYS GLY PHE GLY SEQRES 30 D 393 PHE VAL LYS LEU ASN GLN LEU ALA ILE GLU HIS LEU LEU SEQRES 31 D 393 GLY ALA ARG
HET XYL A 397 10 HET XYL B 397 10 HET XYL C 397 10 HET XYL D 397 10 HET CO A 395 1 HET CO A 396 1 HET CO B 395 1 HET CO B 396 1 HET CO C 395 1 HET CO C 396 1 HET CO D 395 1 HET CO D 396 1
HETNAM XYL D-XYLITOL HETNAM CO COBALT (II) ION
FORMUL 5 XYL 4(C5 H12 O5) FORMUL 9 CO 8(CO 2+) FORMUL 17 HOH *881(H2 O)
HELIX 1 1 THR A 6 ASP A 9 5 4 HELIX 2 2 LEU A 15 GLY A 19 1 5 HELIX 3 3 ASP A 35 GLY A 47 1 13 HELIX 4 4 HIS A 54 VAL A 59 1 6 HELIX 5 5 ASP A 64 GLY A 83 1 20 HELIX 6 6 HIS A 96 LYS A 100 5 5 HELIX 7 7 ASP A 108 GLY A 130 1 23 HELIX 8 8 TYR A 145 LYS A 149 5 5 HELIX 9 9 ASP A 150 GLY A 173 1 24 HELIX 10 10 THR A 195 GLN A 204 1 10 HELIX 11 11 ARG A 208 GLU A 210 5 3 HELIX 12 12 GLU A 217 MET A 223 1 7 HELIX 13 13 ASN A 227 LYS A 239 1 13 HELIX 14 14 ASP A 264 ASN A 277 1 14 HELIX 15 15 GLY A 278 ALA A 282 5 5 HELIX 16 16 ASP A 300 ASP A 328 1 29 HELIX 17 17 ASP A 328 SER A 338 1 11 HELIX 18 18 VAL A 340 THR A 345 5 6 HELIX 19 19 GLY A 353 ASP A 360 1 8 HELIX 20 20 ARG A 361 PHE A 364 5 4 HELIX 21 21 ASP A 368 ALA A 374 1 7 HELIX 22 22 GLY A 378 LEU A 391 1 14 HELIX 23 23 THR B 6 ASP B 9 5 4 HELIX 24 24 LEU B 15 GLY B 19 1 5 HELIX 25 25 ASP B 35 GLY B 47 1 13 HELIX 26 26 HIS B 54 VAL B 59 1 6 HELIX 27 27 ASP B 64 GLY B 83 1 20 HELIX 28 28 HIS B 96 LYS B 100 5 5 HELIX 29 29 ASP B 108 GLY B 130 1 23 HELIX 30 30 TYR B 145 LYS B 149 5 5 HELIX 31 31 ASP B 150 ARG B 172 1 23 HELIX 32 32 THR B 195 GLN B 204 1 10 HELIX 33 33 ARG B 208 GLU B 210 5 3 HELIX 34 34 GLU B 217 MET B 223 1 7 HELIX 35 35 ASN B 227 HIS B 238 1 12 HELIX 36 36 ASP B 264 ASN B 277 1 14 HELIX 37 37 ASP B 300 ASP B 328 1 29 HELIX 38 38 ASP B 328 LYS B 339 1 12 HELIX 39 39 VAL B 340 THR B 345 5 6 HELIX 40 40 GLY B 353 ASP B 360 1 8 HELIX 41 41 ARG B 361 PHE B 364 5 4 HELIX 42 42 ASP B 368 ALA B 374 1 7 HELIX 43 43 GLY B 378 LEU B 391 1 14 HELIX 44 44 THR C 6 ASP C 9 5 4 HELIX 45 45 LEU C 15 GLY C 19 1 5 HELIX 46 46 ASP C 35 GLY C 47 1 13 HELIX 47 47 HIS C 54 VAL C 59 1 6 HELIX 48 48 ASP C 64 GLY C 83 1 20 HELIX 49 49 HIS C 96 LYS C 100 5 5 HELIX 50 50 ASP C 108 GLY C 130 1 23 HELIX 51 51 TYR C 145 LYS C 149 5 5 HELIX 52 52 ASP C 150 GLY C 173 1 24 HELIX 53 53 THR C 195 GLN C 204 1 10 HELIX 54 54 ARG C 208 GLU C 210 5 3 HELIX 55 55 GLU C 217 MET C 223 1 7 HELIX 56 56 ASN C 227 HIS C 238 1 12 HELIX 57 57 ASP C 264 ASN C 277 1 14 HELIX 58 58 ASP C 300 ASP C 328 1 29 HELIX 59 59 ASP C 328 SER C 338 1 11 HELIX 60 60 LYS C 339 THR C 345 5 7 HELIX 61 61 GLY C 353 ASP C 360 1 8 HELIX 62 62 ARG C 361 PHE C 364 5 4 HELIX 63 63 ASP C 368 GLY C 373 1 6 HELIX 64 64 GLY C 378 LEU C 391 1 14 HELIX 65 65 THR D 6 ASP D 9 5 4 HELIX 66 66 LEU D 15 GLY D 19 1 5 HELIX 67 67 ASP D 35 GLY D 47 1 13 HELIX 68 68 HIS D 54 VAL D 59 1 6 HELIX 69 69 ASP D 64 GLY D 83 1 20 HELIX 70 70 HIS D 96 LYS D 100 5 5 HELIX 71 71 ASP D 108 GLY D 130 1 23 HELIX 72 72 TYR D 145 LYS D 149 5 5 HELIX 73 73 ASP D 150 GLY D 173 1 24 HELIX 74 74 THR D 195 GLN D 204 1 10 HELIX 75 75 ARG D 208 GLU D 210 5 3 HELIX 76 76 GLU D 217 MET D 223 1 7 HELIX 77 77 ASN D 227 LYS D 239 1 13 HELIX 78 78 ASP D 264 ASN D 277 1 14 HELIX 79 79 ASP D 300 ALA D 327 1 28 HELIX 80 80 ASP D 328 LYS D 339 1 12 HELIX 81 81 VAL D 340 THR D 345 5 6 HELIX 82 82 GLY D 353 ASP D 360 1 8 HELIX 83 83 ARG D 361 PHE D 364 5 4 HELIX 84 84 ASP D 368 GLY D 373 1 6 HELIX 85 85 GLY D 378 LEU D 391 1 14
SHEET 1 A 4 GLY A 50 THR A 52 0 SHEET 2 A 4 PHE A 11 GLY A 14 1 O PHE A 11 N GLY A 50 SHEET 3 A 4 ARG A 289 PHE A 291 1 O ARG A 289 N SER A 12 SHEET 4 A 4 ASP A 245 LEU A 246 1 N LEU A 246 O HIS A 290 SHEET 1 B 4 MET A 88 THR A 90 0 SHEET 2 B 4 THR A 133 TRP A 137 1 O THR A 133 N VAL A 89 SHEET 3 B 4 ARG A 177 GLU A 181 1 O ARG A 177 N LEU A 134 SHEET 4 B 4 PHE A 212 ILE A 214 1 N GLY A 213 O PHE A 178 SHEET 1 C 2 GLY A 142 ALA A 143 0 SHEET 2 C 2 ASP A 190 ILE A 191 -1 O ASP A 190 N ALA A 143 SHEET 1 D 4 GLY B 50 THR B 52 0 SHEET 2 D 4 PHE B 11 GLY B 14 1 O PHE B 11 N GLY B 50 SHEET 3 D 4 ARG B 289 PHE B 291 1 O ARG B 289 N SER B 12 SHEET 4 D 4 ASP B 245 LEU B 246 1 N LEU B 246 O HIS B 290 SHEET 1 E 4 MET B 88 THR B 90 0 SHEET 2 E 4 THR B 133 TRP B 137 1 O THR B 133 N VAL B 89 SHEET 3 E 4 ARG B 177 GLU B 181 1 O ARG B 177 N LEU B 134 SHEET 4 E 4 PHE B 212 ILE B 214 1 N GLY B 213 O PHE B 178 SHEET 1 F 2 GLY B 142 ALA B 143 0 SHEET 2 F 2 ASP B 190 ILE B 191 -1 O ASP B 190 N ALA B 143 SHEET 1 G 4 GLY C 50 THR C 52 0 SHEET 2 G 4 PHE C 11 GLY C 14 1 O PHE C 11 N GLY C 50 SHEET 3 G 4 ARG C 289 PHE C 291 1 O ARG C 289 N SER C 12 SHEET 4 G 4 ASP C 245 LEU C 246 1 N LEU C 246 O HIS C 290 SHEET 1 H 4 MET C 88 THR C 90 0 SHEET 2 H 4 THR C 133 TRP C 137 1 O THR C 133 N VAL C 89 SHEET 3 H 4 ARG C 177 GLU C 181 1 O ARG C 177 N LEU C 134 SHEET 4 H 4 PHE C 212 ILE C 214 1 N GLY C 213 O PHE C 178 SHEET 1 I 2 GLY C 142 ALA C 143 0 SHEET 2 I 2 ASP C 190 ILE C 191 -1 O ASP C 190 N ALA C 143 SHEET 1 J 4 GLY D 50 THR D 52 0 SHEET 2 J 4 PHE D 11 GLY D 14 1 O PHE D 11 N GLY D 50 SHEET 3 J 4 ARG D 289 PHE D 291 1 O ARG D 289 N SER D 12 SHEET 4 J 4 ASP D 245 LEU D 246 1 N LEU D 246 O HIS D 290 SHEET 1 K 4 MET D 88 THR D 90 0 SHEET 2 K 4 THR D 133 LEU D 136 1 O THR D 133 N VAL D 89 SHEET 3 K 4 ARG D 177 ILE D 180 1 O ARG D 177 N LEU D 134 SHEET 4 K 4 PHE D 212 ILE D 214 1 N GLY D 213 O PHE D 178 SHEET 1 L 2 GLY D 142 ALA D 143 0 SHEET 2 L 2 ASP D 190 ILE D 191 -1 O ASP D 190 N ALA D 143
LINK CO CO A 395 OD2 ASP A 292 1555 1555 2.15 LINK CO CO A 395 OE1 GLU A 217 1555 1555 2.22 LINK CO CO A 395 O2 XYL A 397 1555 1555 2.21 LINK CO CO A 395 O4 XYL A 397 1555 1555 2.47 LINK CO CO A 395 OE2 GLU A 181 1555 1555 2.21 LINK CO CO A 395 OD2 ASP A 245 1555 1555 2.21 LINK CO CO A 396 OE2 GLU A 217 1555 1555 2.19 LINK CO CO A 396 NE2 HIS A 220 1555 1555 2.76 LINK CO CO A 396 OD1 ASP A 255 1555 1555 2.52 LINK CO CO A 396 O HOH A 541 1555 1555 2.32 LINK CO CO A 396 OD2 ASP A 255 1555 1555 2.52 LINK CO CO A 396 O1 XYL A 397 1555 1555 2.73 LINK CO CO B 395 O4 XYL B 397 1555 1555 2.46 LINK CO CO B 395 OE2 GLU B 181 1555 1555 2.34 LINK CO CO B 395 OD2 ASP B 245 1555 1555 2.25 LINK CO CO B 395 O2 XYL B 397 1555 1555 2.35 LINK CO CO B 395 OD2 ASP B 292 1555 1555 2.30 LINK CO CO B 395 OE1 GLU B 217 1555 1555 2.11 LINK CO CO B 396 OD2 ASP B 255 1555 1555 2.44 LINK CO CO B 396 O1 XYL B 397 1555 1555 2.74 LINK CO CO B 396 O HOH B 537 1555 1555 2.30 LINK CO CO B 396 OE2 GLU B 217 1555 1555 2.33 LINK CO CO B 396 NE2 HIS B 220 1555 1555 2.73 LINK CO CO B 396 OD1 ASP B 255 1555 1555 2.56 LINK CO CO C 395 OE1 GLU C 217 1555 1555 2.27 LINK CO CO C 395 OD2 ASP C 245 1555 1555 2.23 LINK CO CO C 395 O2 XYL C 397 1555 1555 2.26 LINK CO CO C 395 O4 XYL C 397 1555 1555 2.52 LINK CO CO C 395 OD2 ASP C 292 1555 1555 2.25 LINK CO CO C 395 OE2 GLU C 181 1555 1555 2.27 LINK CO CO C 396 OE2 GLU C 217 1555 1555 2.33 LINK CO CO C 396 OD1 ASP C 255 1555 1555 2.44 LINK CO CO C 396 OD2 ASP C 255 1555 1555 2.29 LINK CO CO C 396 O HOH C 552 1555 1555 2.26 LINK CO CO C 396 OD1 ASP C 257 1555 1555 2.77 LINK CO CO C 396 NE2 HIS C 220 1555 1555 2.74 LINK CO CO D 395 OD2 ASP D 245 1555 1555 2.26 LINK CO CO D 395 O4 XYL D 397 1555 1555 2.40 LINK CO CO D 395 OE1 GLU D 217 1555 1555 2.21 LINK CO CO D 395 OD2 ASP D 292 1555 1555 2.09 LINK CO CO D 395 O2 XYL D 397 1555 1555 2.32 LINK CO CO D 395 OE2 GLU D 181 1555 1555 2.21 LINK CO CO D 396 OE2 GLU D 217 1555 1555 2.30 LINK CO CO D 396 OD1 ASP D 255 1555 1555 2.59 LINK CO CO D 396 OD2 ASP D 255 1555 1555 2.28 LINK CO CO D 396 O HOH D 548 1555 1555 2.23 LINK CO CO D 396 OD1 ASP D 257 1555 1555 2.66
CISPEP 1 GLU A 186 PRO A 187 0 3.04 CISPEP 2 GLU B 186 PRO B 187 0 2.90 CISPEP 3 GLU C 186 PRO C 187 0 3.35 CISPEP 4 GLU D 186 PRO D 187 0 3.47
SITE 1 AC1 16 TRP A 16 HIS A 54 TRP A 137 GLU A 181 SITE 2 AC1 16 LYS A 183 GLU A 217 HIS A 220 ASP A 245 SITE 3 AC1 16 ASP A 255 ASP A 292 CO A 395 CO A 396 SITE 4 AC1 16 HOH A 456 HOH A 457 HOH A 541 HOH A 592 SITE 1 AC2 16 TRP B 16 HIS B 54 TRP B 137 GLU B 181 SITE 2 AC2 16 LYS B 183 GLU B 217 HIS B 220 ASP B 245 SITE 3 AC2 16 ASP B 255 ASP B 292 CO B 395 CO B 396 SITE 4 AC2 16 HOH B 456 HOH B 457 HOH B 537 HOH B 589 SITE 1 AC3 18 TRP C 16 HIS C 54 PHE C 94 TRP C 137 SITE 2 AC3 18 GLU C 181 LYS C 183 GLU C 217 HIS C 220 SITE 3 AC3 18 ASP C 245 ASP C 255 ASP C 292 CO C 395 SITE 4 AC3 18 CO C 396 HOH C 467 HOH C 468 HOH C 552 SITE 5 AC3 18 HOH C 609 HOH C 610 SITE 1 AC4 16 TRP D 16 HIS D 54 TRP D 137 GLU D 181 SITE 2 AC4 16 LYS D 183 GLU D 217 HIS D 220 ASP D 245 SITE 3 AC4 16 ASP D 255 ASP D 292 CO D 395 CO D 396 SITE 4 AC4 16 HOH D 467 HOH D 468 HOH D 548 HOH D 598 SITE 1 AC5 5 GLU A 181 GLU A 217 ASP A 245 ASP A 292 SITE 2 AC5 5 XYL A 397 SITE 1 AC6 6 GLU A 217 HIS A 220 ASP A 255 ASP A 257 SITE 2 AC6 6 XYL A 397 HOH A 541 SITE 1 AC7 5 GLU B 181 GLU B 217 ASP B 245 ASP B 292 SITE 2 AC7 5 XYL B 397 SITE 1 AC8 6 GLU B 217 HIS B 220 ASP B 255 ASP B 257 SITE 2 AC8 6 XYL B 397 HOH B 537 SITE 1 AC9 5 GLU C 181 GLU C 217 ASP C 245 ASP C 292 SITE 2 AC9 5 XYL C 397 SITE 1 BC1 6 GLU C 217 HIS C 220 ASP C 255 ASP C 257 SITE 2 BC1 6 XYL C 397 HOH C 552 SITE 1 BC2 5 GLU D 181 GLU D 217 ASP D 245 ASP D 292 SITE 2 BC2 5 XYL D 397 SITE 1 BC3 6 GLU D 217 HIS D 220 ASP D 255 ASP D 257 SITE 2 BC3 6 XYL D 397 HOH D 548
CRYST1 143.450 143.450 231.500 90.00 90.00 120.00 P 32 2 1 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006971 0.004025 0.000000 0.00000
SCALE2 0.000000 0.008049 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004320 0.00000
MTRIX1 1 -0.802800 0.575700 -0.155200 40.88000 1
MTRIX2 1 0.575300 0.679700 -0.455000 83.55000 1
MTRIX3 1 -0.156400 -0.454600 -0.876900 360.39999 1
MTRIX1 2 0.648000 -0.664500 -0.372100 116.73000 1
MTRIX2 2 -0.664800 -0.731900 0.149300 102.09000 1
MTRIX3 2 -0.371600 0.150700 -0.916100 334.95999 1
MTRIX1 3 -0.844300 0.090100 0.528200 -46.40000 1
MTRIX2 3 0.088900 -0.948500 0.304000 67.80000 1
MTRIX3 3 0.528400 0.303600 0.792900 2.17000 1