10 20 30 40 50 60 70 80 1XET - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 12-SEP-04 1XET
TITLE CRYSTAL STRUCTURE OF STILBENE SYNTHASE FROM PINUS TITLE 2 SYLVESTRIS, COMPLEXED WITH METHYLMALONYL COA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROPINOSYLVIN SYNTHASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: STILBENE SYNTHASE, STS, PINOSYLVIN-FORMING COMPND 5 STILBENE SYNTHASE; COMPND 6 EC: 2.3.1.-; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PINUS SYLVESTRIS; SOURCE 3 ORGANISM_COMMON: SCOTS PINE; SOURCE 4 ORGANISM_TAXID: 3349; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28(A)
KEYWDS TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR S.H.NG,D.CHIRGADZE,D.SPITELLER,T.L.LI,J.B.SPENCER, AUTHOR 2 T.L.BLUNDELL
REVDAT 2 24-FEB-09 1XET 1 VERSN REVDAT 1 11-APR-06 1XET 0
JRNL AUTH S.H.NG,D.CHIRGADZE,D.SPITELLER,T.L.LI,J.B.SPENCER, JRNL AUTH 2 T.L.BLUNDELL JRNL TITL CRYSTAL STRUCTURE OF STILBENE SYNTHASE FROM PINUS JRNL TITL 2 SYLVESTRIS, COMPLEXED WITH METHYLMALONYL COA JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2308085.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 97245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4833 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 16310 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 818 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11561 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 93 REMARK 3 SOLVENT ATOMS : 854 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.98000 REMARK 3 B22 (A**2) : 1.74000 REMARK 3 B33 (A**2) : -0.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.16000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.22 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.77 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 51.81 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CIS_PEPTIDE.PARAM REMARK 3 PARAMETER FILE 4 : LIG.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 1XET COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-04. REMARK 100 THE RCSB ID CODE IS RCSB030278.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96601 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 22.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: ISOMORPHOUS REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, CITRIC ACID, PH 3.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 55.59500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLY A 3 REMARK 465 VAL A 4 REMARK 465 ASP A 5 REMARK 465 GLN A 393 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLY B 3 REMARK 465 VAL B 4 REMARK 465 ASP B 5 REMARK 465 GLN B 393 REMARK 465 MET C -19 REMARK 465 GLY C -18 REMARK 465 SER C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 SER C -9 REMARK 465 SER C -8 REMARK 465 GLY C -7 REMARK 465 LEU C -6 REMARK 465 VAL C -5 REMARK 465 PRO C -4 REMARK 465 ARG C -3 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 GLY C 3 REMARK 465 THR C 52 REMARK 465 GLU C 53 REMARK 465 LEU C 54 REMARK 465 LYS C 55 REMARK 465 ASP C 56 REMARK 465 LYS C 57 REMARK 465 LEU C 209 REMARK 465 GLN C 393 REMARK 465 MET D -19 REMARK 465 GLY D -18 REMARK 465 SER D -17 REMARK 465 SER D -16 REMARK 465 HIS D -15 REMARK 465 HIS D -14 REMARK 465 HIS D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 HIS D -10 REMARK 465 SER D -9 REMARK 465 SER D -8 REMARK 465 GLY D -7 REMARK 465 LEU D -6 REMARK 465 VAL D -5 REMARK 465 PRO D -4 REMARK 465 ARG D -3 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 GLY D 3 REMARK 465 VAL D 4 REMARK 465 ASP D 5 REMARK 465 THR D 52 REMARK 465 GLU D 53 REMARK 465 LEU D 54 REMARK 465 LYS D 55
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 ARG A 64 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 LEU B 12 CG CD1 CD2 REMARK 470 HIS B 50 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 LYS B 80 CG CD CE NZ REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 GLN B 118 CG CD OE1 NE2 REMARK 470 LYS B 237 CG CD CE NZ REMARK 470 LYS B 294 CG CD CE NZ REMARK 470 GLU B 336 CG CD OE1 OE2 REMARK 470 VAL C 4 CG1 CG2 REMARK 470 GLU C 7 CG CD OE1 OE2 REMARK 470 LYS C 11 CG CD CE NZ REMARK 470 LYS C 59 CG CD CE NZ REMARK 470 ARG C 60 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 68 CG CD CE NZ REMARK 470 GLU C 77 CG CD OE1 OE2 REMARK 470 LYS C 80 CG CD CE NZ REMARK 470 LYS C 81 CG CD CE NZ REMARK 470 GLU C 206 CG CD OE1 OE2 REMARK 470 ASP C 210 CG OD1 OD2 REMARK 470 GLN C 269 CG CD OE1 NE2 REMARK 470 LYS C 294 CG CD CE NZ REMARK 470 PRO C 324 CG CD REMARK 470 GLU C 336 CG CD OE1 OE2 REMARK 470 GLU C 366 CG CD OE1 OE2 REMARK 470 GLU D 7 CG CD OE1 OE2 REMARK 470 LYS D 11 CG CD CE NZ REMARK 470 GLU D 49 CG CD OE1 OE2 REMARK 470 LYS D 59 CG CD CE NZ REMARK 470 GLU D 63 CG CD OE1 OE2 REMARK 470 ARG D 64 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 68 CG CD CE NZ REMARK 470 GLU D 77 CG CD OE1 OE2 REMARK 470 LYS D 80 CG CD CE NZ REMARK 470 LYS D 81 CG CD CE NZ REMARK 470 GLN D 118 CG CD OE1 NE2 REMARK 470 GLU D 206 CG CD OE1 OE2 REMARK 470 GLU D 254 CG CD OE1 OE2 REMARK 470 GLN D 269 CG CD OE1 NE2 REMARK 470 LYS D 294 CG CD CE NZ REMARK 470 GLU D 336 CG CD OE1 OE2 REMARK 470 LYS D 354 CG CD CE NZ REMARK 470 GLU D 366 CG CD OE1 OE2 REMARK 470 GLN D 393 CG CD OE1 NE2
REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG D 107 NE CZ NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 3241 O HOH D 4014 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 30 49.27 -74.96 REMARK 500 PHE A 88 -75.03 -88.13 REMARK 500 VAL A 89 14.55 -146.17 REMARK 500 SER A 93 3.71 -153.74 REMARK 500 GLN A 234 6.00 57.15 REMARK 500 SER A 253 28.25 -145.69 REMARK 500 SER A 341 -132.53 54.43 REMARK 500 ALA B 23 149.49 -171.08 REMARK 500 PHE B 88 -70.54 -92.10 REMARK 500 VAL B 89 17.95 -150.40 REMARK 500 ASN B 252 68.59 38.53 REMARK 500 SER B 253 27.72 -147.16 REMARK 500 SER B 341 -132.18 55.32 REMARK 500 ALA C 23 149.86 -171.75 REMARK 500 HIS C 50 -134.46 -153.41 REMARK 500 PHE C 88 -79.44 -83.89 REMARK 500 VAL C 89 16.70 -141.55 REMARK 500 SER C 93 4.26 -157.02 REMARK 500 SER C 211 -54.80 29.42 REMARK 500 VAL C 235 -59.08 -122.03 REMARK 500 ASN C 252 59.20 39.66 REMARK 500 SER C 253 22.53 -141.64 REMARK 500 SER C 341 -129.40 55.04 REMARK 500 HIS D 50 24.89 114.59 REMARK 500 PHE D 88 -78.18 -82.83 REMARK 500 VAL D 89 17.43 -141.87 REMARK 500 SER D 93 2.06 -157.13 REMARK 500 THR D 197 5.48 -68.24 REMARK 500 SER D 341 -134.63 55.17 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C3051 DISTANCE = 5.76 ANGSTROMS REMARK 525 HOH B2085 DISTANCE = 5.61 ANGSTROMS REMARK 525 HOH C3099 DISTANCE = 7.42 ANGSTROMS REMARK 525 HOH C3100 DISTANCE = 5.50 ANGSTROMS REMARK 525 HOH D4102 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH B2123 DISTANCE = 5.35 ANGSTROMS REMARK 525 HOH A 555 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B2208 DISTANCE = 5.33 ANGSTROMS
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MCA D 4001
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3IO B 2000 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3IO C 3000 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3IO D 4000 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MCA D 4001
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XES RELATED DB: PDB
DBREF 1XET A 1 393 UNP Q02323 DPSS_PINSY 1 393 DBREF 1XET B 1 393 UNP Q02323 DPSS_PINSY 1 393 DBREF 1XET C 1 393 UNP Q02323 DPSS_PINSY 1 393 DBREF 1XET D 1 393 UNP Q02323 DPSS_PINSY 1 393
SEQADV 1XET MET A -19 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY A -18 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER A -17 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER A -16 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS A -15 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS A -14 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS A -13 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS A -12 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS A -11 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS A -10 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER A -9 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER A -8 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY A -7 UNP Q02323 CLONING ARTIFACT SEQADV 1XET LEU A -6 UNP Q02323 CLONING ARTIFACT SEQADV 1XET VAL A -5 UNP Q02323 CLONING ARTIFACT SEQADV 1XET PRO A -4 UNP Q02323 CLONING ARTIFACT SEQADV 1XET ARG A -3 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY A -2 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER A -1 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS A 0 UNP Q02323 CLONING ARTIFACT SEQADV 1XET MET B -19 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY B -18 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER B -17 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER B -16 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS B -15 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS B -14 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS B -13 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS B -12 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS B -11 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS B -10 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER B -9 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER B -8 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY B -7 UNP Q02323 CLONING ARTIFACT SEQADV 1XET LEU B -6 UNP Q02323 CLONING ARTIFACT SEQADV 1XET VAL B -5 UNP Q02323 CLONING ARTIFACT SEQADV 1XET PRO B -4 UNP Q02323 CLONING ARTIFACT SEQADV 1XET ARG B -3 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY B -2 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER B -1 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS B 0 UNP Q02323 CLONING ARTIFACT SEQADV 1XET MET C -19 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY C -18 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER C -17 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER C -16 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS C -15 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS C -14 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS C -13 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS C -12 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS C -11 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS C -10 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER C -9 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER C -8 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY C -7 UNP Q02323 CLONING ARTIFACT SEQADV 1XET LEU C -6 UNP Q02323 CLONING ARTIFACT SEQADV 1XET VAL C -5 UNP Q02323 CLONING ARTIFACT SEQADV 1XET PRO C -4 UNP Q02323 CLONING ARTIFACT SEQADV 1XET ARG C -3 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY C -2 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER C -1 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS C 0 UNP Q02323 CLONING ARTIFACT SEQADV 1XET MET D -19 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY D -18 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER D -17 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER D -16 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS D -15 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS D -14 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS D -13 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS D -12 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS D -11 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS D -10 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER D -9 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER D -8 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY D -7 UNP Q02323 CLONING ARTIFACT SEQADV 1XET LEU D -6 UNP Q02323 CLONING ARTIFACT SEQADV 1XET VAL D -5 UNP Q02323 CLONING ARTIFACT SEQADV 1XET PRO D -4 UNP Q02323 CLONING ARTIFACT SEQADV 1XET ARG D -3 UNP Q02323 CLONING ARTIFACT SEQADV 1XET GLY D -2 UNP Q02323 CLONING ARTIFACT SEQADV 1XET SER D -1 UNP Q02323 CLONING ARTIFACT SEQADV 1XET HIS D 0 UNP Q02323 CLONING ARTIFACT
SEQRES 1 A 413 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 413 LEU VAL PRO ARG GLY SER HIS MET GLY GLY VAL ASP PHE SEQRES 3 A 413 GLU GLY PHE ARG LYS LEU GLN ARG ALA ASP GLY PHE ALA SEQRES 4 A 413 SER ILE LEU ALA ILE GLY THR ALA ASN PRO PRO ASN ALA SEQRES 5 A 413 VAL ASP GLN SER THR TYR PRO ASP PHE TYR PHE ARG ILE SEQRES 6 A 413 THR GLY ASN GLU HIS ASN THR GLU LEU LYS ASP LYS PHE SEQRES 7 A 413 LYS ARG ILE CYS GLU ARG SER ALA ILE LYS GLN ARG TYR SEQRES 8 A 413 MET TYR LEU THR GLU GLU ILE LEU LYS LYS ASN PRO ASP SEQRES 9 A 413 VAL CYS ALA PHE VAL GLU VAL PRO SER LEU ASP ALA ARG SEQRES 10 A 413 GLN ALA MET LEU ALA MET GLU VAL PRO ARG LEU ALA LYS SEQRES 11 A 413 GLU ALA ALA GLU LYS ALA ILE GLN GLU TRP GLY GLN SER SEQRES 12 A 413 LYS SER GLY ILE THR HIS LEU ILE PHE CYS SER THR THR SEQRES 13 A 413 THR PRO ASP LEU PRO GLY ALA ASP PHE GLU VAL ALA LYS SEQRES 14 A 413 LEU LEU GLY LEU HIS PRO SER VAL LYS ARG VAL GLY VAL SEQRES 15 A 413 PHE GLN HIS GLY CYS PHE ALA GLY GLY THR VAL LEU ARG SEQRES 16 A 413 MET ALA LYS ASP LEU ALA GLU ASN ASN ARG GLY ALA ARG SEQRES 17 A 413 VAL LEU VAL ILE CYS SER GLU THR THR ALA VAL THR PHE SEQRES 18 A 413 ARG GLY PRO SER GLU THR HIS LEU ASP SER LEU VAL GLY SEQRES 19 A 413 GLN ALA LEU PHE GLY ASP GLY ALA SER ALA LEU ILE VAL SEQRES 20 A 413 GLY ALA ASP PRO ILE PRO GLN VAL GLU LYS ALA CYS PHE SEQRES 21 A 413 GLU ILE VAL TRP THR ALA GLN THR VAL VAL PRO ASN SER SEQRES 22 A 413 GLU GLY ALA ILE GLY GLY LYS VAL ARG GLU VAL GLY LEU SEQRES 23 A 413 THR PHE GLN LEU LYS GLY ALA VAL PRO ASP LEU ILE SER SEQRES 24 A 413 ALA ASN ILE GLU ASN CYS MET VAL GLU ALA PHE SER GLN SEQRES 25 A 413 PHE LYS ILE SER ASP TRP ASN LYS LEU PHE TRP VAL VAL SEQRES 26 A 413 HIS PRO GLY GLY ARG ALA ILE LEU ASP ARG VAL GLU ALA SEQRES 27 A 413 LYS LEU ASN LEU ASP PRO THR LYS LEU ILE PRO THR ARG SEQRES 28 A 413 HIS VAL MET SER GLU TYR GLY ASN MET SER SER ALA CYS SEQRES 29 A 413 VAL HIS PHE ILE LEU ASP GLN THR ARG LYS ALA SER LEU SEQRES 30 A 413 GLN ASN GLY CYS SER THR THR GLY GLU GLY LEU GLU MET SEQRES 31 A 413 GLY VAL LEU PHE GLY PHE GLY PRO GLY LEU THR ILE GLU SEQRES 32 A 413 THR VAL VAL LEU LYS SER VAL PRO ILE GLN SEQRES 1 B 413 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 413 LEU VAL PRO ARG GLY SER HIS MET GLY GLY VAL ASP PHE SEQRES 3 B 413 GLU GLY PHE ARG LYS LEU GLN ARG ALA ASP GLY PHE ALA SEQRES 4 B 413 SER ILE LEU ALA ILE GLY THR ALA ASN PRO PRO ASN ALA SEQRES 5 B 413 VAL ASP GLN SER THR TYR PRO ASP PHE TYR PHE ARG ILE SEQRES 6 B 413 THR GLY ASN GLU HIS ASN THR GLU LEU LYS ASP LYS PHE SEQRES 7 B 413 LYS ARG ILE CYS GLU ARG SER ALA ILE LYS GLN ARG TYR SEQRES 8 B 413 MET TYR LEU THR GLU GLU ILE LEU LYS LYS ASN PRO ASP SEQRES 9 B 413 VAL CYS ALA PHE VAL GLU VAL PRO SER LEU ASP ALA ARG SEQRES 10 B 413 GLN ALA MET LEU ALA MET GLU VAL PRO ARG LEU ALA LYS SEQRES 11 B 413 GLU ALA ALA GLU LYS ALA ILE GLN GLU TRP GLY GLN SER SEQRES 12 B 413 LYS SER GLY ILE THR HIS LEU ILE PHE CYS SER THR THR SEQRES 13 B 413 THR PRO ASP LEU PRO GLY ALA ASP PHE GLU VAL ALA LYS SEQRES 14 B 413 LEU LEU GLY LEU HIS PRO SER VAL LYS ARG VAL GLY VAL SEQRES 15 B 413 PHE GLN HIS GLY CYS PHE ALA GLY GLY THR VAL LEU ARG SEQRES 16 B 413 MET ALA LYS ASP LEU ALA GLU ASN ASN ARG GLY ALA ARG SEQRES 17 B 413 VAL LEU VAL ILE CYS SER GLU THR THR ALA VAL THR PHE SEQRES 18 B 413 ARG GLY PRO SER GLU THR HIS LEU ASP SER LEU VAL GLY SEQRES 19 B 413 GLN ALA LEU PHE GLY ASP GLY ALA SER ALA LEU ILE VAL SEQRES 20 B 413 GLY ALA ASP PRO ILE PRO GLN VAL GLU LYS ALA CYS PHE SEQRES 21 B 413 GLU ILE VAL TRP THR ALA GLN THR VAL VAL PRO ASN SER SEQRES 22 B 413 GLU GLY ALA ILE GLY GLY LYS VAL ARG GLU VAL GLY LEU SEQRES 23 B 413 THR PHE GLN LEU LYS GLY ALA VAL PRO ASP LEU ILE SER SEQRES 24 B 413 ALA ASN ILE GLU ASN CYS MET VAL GLU ALA PHE SER GLN SEQRES 25 B 413 PHE LYS ILE SER ASP TRP ASN LYS LEU PHE TRP VAL VAL SEQRES 26 B 413 HIS PRO GLY GLY ARG ALA ILE LEU ASP ARG VAL GLU ALA SEQRES 27 B 413 LYS LEU ASN LEU ASP PRO THR LYS LEU ILE PRO THR ARG SEQRES 28 B 413 HIS VAL MET SER GLU TYR GLY ASN MET SER SER ALA CYS SEQRES 29 B 413 VAL HIS PHE ILE LEU ASP GLN THR ARG LYS ALA SER LEU SEQRES 30 B 413 GLN ASN GLY CYS SER THR THR GLY GLU GLY LEU GLU MET SEQRES 31 B 413 GLY VAL LEU PHE GLY PHE GLY PRO GLY LEU THR ILE GLU SEQRES 32 B 413 THR VAL VAL LEU LYS SER VAL PRO ILE GLN SEQRES 1 C 413 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 413 LEU VAL PRO ARG GLY SER HIS MET GLY GLY VAL ASP PHE SEQRES 3 C 413 GLU GLY PHE ARG LYS LEU GLN ARG ALA ASP GLY PHE ALA SEQRES 4 C 413 SER ILE LEU ALA ILE GLY THR ALA ASN PRO PRO ASN ALA SEQRES 5 C 413 VAL ASP GLN SER THR TYR PRO ASP PHE TYR PHE ARG ILE SEQRES 6 C 413 THR GLY ASN GLU HIS ASN THR GLU LEU LYS ASP LYS PHE SEQRES 7 C 413 LYS ARG ILE CYS GLU ARG SER ALA ILE LYS GLN ARG TYR SEQRES 8 C 413 MET TYR LEU THR GLU GLU ILE LEU LYS LYS ASN PRO ASP SEQRES 9 C 413 VAL CYS ALA PHE VAL GLU VAL PRO SER LEU ASP ALA ARG SEQRES 10 C 413 GLN ALA MET LEU ALA MET GLU VAL PRO ARG LEU ALA LYS SEQRES 11 C 413 GLU ALA ALA GLU LYS ALA ILE GLN GLU TRP GLY GLN SER SEQRES 12 C 413 LYS SER GLY ILE THR HIS LEU ILE PHE CYS SER THR THR SEQRES 13 C 413 THR PRO ASP LEU PRO GLY ALA ASP PHE GLU VAL ALA LYS SEQRES 14 C 413 LEU LEU GLY LEU HIS PRO SER VAL LYS ARG VAL GLY VAL SEQRES 15 C 413 PHE GLN HIS GLY CYS PHE ALA GLY GLY THR VAL LEU ARG SEQRES 16 C 413 MET ALA LYS ASP LEU ALA GLU ASN ASN ARG GLY ALA ARG SEQRES 17 C 413 VAL LEU VAL ILE CYS SER GLU THR THR ALA VAL THR PHE SEQRES 18 C 413 ARG GLY PRO SER GLU THR HIS LEU ASP SER LEU VAL GLY SEQRES 19 C 413 GLN ALA LEU PHE GLY ASP GLY ALA SER ALA LEU ILE VAL SEQRES 20 C 413 GLY ALA ASP PRO ILE PRO GLN VAL GLU LYS ALA CYS PHE SEQRES 21 C 413 GLU ILE VAL TRP THR ALA GLN THR VAL VAL PRO ASN SER SEQRES 22 C 413 GLU GLY ALA ILE GLY GLY LYS VAL ARG GLU VAL GLY LEU SEQRES 23 C 413 THR PHE GLN LEU LYS GLY ALA VAL PRO ASP LEU ILE SER SEQRES 24 C 413 ALA ASN ILE GLU ASN CYS MET VAL GLU ALA PHE SER GLN SEQRES 25 C 413 PHE LYS ILE SER ASP TRP ASN LYS LEU PHE TRP VAL VAL SEQRES 26 C 413 HIS PRO GLY GLY ARG ALA ILE LEU ASP ARG VAL GLU ALA SEQRES 27 C 413 LYS LEU ASN LEU ASP PRO THR LYS LEU ILE PRO THR ARG SEQRES 28 C 413 HIS VAL MET SER GLU TYR GLY ASN MET SER SER ALA CYS SEQRES 29 C 413 VAL HIS PHE ILE LEU ASP GLN THR ARG LYS ALA SER LEU SEQRES 30 C 413 GLN ASN GLY CYS SER THR THR GLY GLU GLY LEU GLU MET SEQRES 31 C 413 GLY VAL LEU PHE GLY PHE GLY PRO GLY LEU THR ILE GLU SEQRES 32 C 413 THR VAL VAL LEU LYS SER VAL PRO ILE GLN SEQRES 1 D 413 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 D 413 LEU VAL PRO ARG GLY SER HIS MET GLY GLY VAL ASP PHE SEQRES 3 D 413 GLU GLY PHE ARG LYS LEU GLN ARG ALA ASP GLY PHE ALA SEQRES 4 D 413 SER ILE LEU ALA ILE GLY THR ALA ASN PRO PRO ASN ALA SEQRES 5 D 413 VAL ASP GLN SER THR TYR PRO ASP PHE TYR PHE ARG ILE SEQRES 6 D 413 THR GLY ASN GLU HIS ASN THR GLU LEU LYS ASP LYS PHE SEQRES 7 D 413 LYS ARG ILE CYS GLU ARG SER ALA ILE LYS GLN ARG TYR SEQRES 8 D 413 MET TYR LEU THR GLU GLU ILE LEU LYS LYS ASN PRO ASP SEQRES 9 D 413 VAL CYS ALA PHE VAL GLU VAL PRO SER LEU ASP ALA ARG SEQRES 10 D 413 GLN ALA MET LEU ALA MET GLU VAL PRO ARG LEU ALA LYS SEQRES 11 D 413 GLU ALA ALA GLU LYS ALA ILE GLN GLU TRP GLY GLN SER SEQRES 12 D 413 LYS SER GLY ILE THR HIS LEU ILE PHE CYS SER THR THR SEQRES 13 D 413 THR PRO ASP LEU PRO GLY ALA ASP PHE GLU VAL ALA LYS SEQRES 14 D 413 LEU LEU GLY LEU HIS PRO SER VAL LYS ARG VAL GLY VAL SEQRES 15 D 413 PHE GLN HIS GLY CYS PHE ALA GLY GLY THR VAL LEU ARG SEQRES 16 D 413 MET ALA LYS ASP LEU ALA GLU ASN ASN ARG GLY ALA ARG SEQRES 17 D 413 VAL LEU VAL ILE CYS SER GLU THR THR ALA VAL THR PHE SEQRES 18 D 413 ARG GLY PRO SER GLU THR HIS LEU ASP SER LEU VAL GLY SEQRES 19 D 413 GLN ALA LEU PHE GLY ASP GLY ALA SER ALA LEU ILE VAL SEQRES 20 D 413 GLY ALA ASP PRO ILE PRO GLN VAL GLU LYS ALA CYS PHE SEQRES 21 D 413 GLU ILE VAL TRP THR ALA GLN THR VAL VAL PRO ASN SER SEQRES 22 D 413 GLU GLY ALA ILE GLY GLY LYS VAL ARG GLU VAL GLY LEU SEQRES 23 D 413 THR PHE GLN LEU LYS GLY ALA VAL PRO ASP LEU ILE SER SEQRES 24 D 413 ALA ASN ILE GLU ASN CYS MET VAL GLU ALA PHE SER GLN SEQRES 25 D 413 PHE LYS ILE SER ASP TRP ASN LYS LEU PHE TRP VAL VAL SEQRES 26 D 413 HIS PRO GLY GLY ARG ALA ILE LEU ASP ARG VAL GLU ALA SEQRES 27 D 413 LYS LEU ASN LEU ASP PRO THR LYS LEU ILE PRO THR ARG SEQRES 28 D 413 HIS VAL MET SER GLU TYR GLY ASN MET SER SER ALA CYS SEQRES 29 D 413 VAL HIS PHE ILE LEU ASP GLN THR ARG LYS ALA SER LEU SEQRES 30 D 413 GLN ASN GLY CYS SER THR THR GLY GLU GLY LEU GLU MET SEQRES 31 D 413 GLY VAL LEU PHE GLY PHE GLY PRO GLY LEU THR ILE GLU SEQRES 32 D 413 THR VAL VAL LEU LYS SER VAL PRO ILE GLN
HET 3IO B2000 15 HET 3IO C3000 15 HET 3IO D4000 15 HET MCA D4001 48
HETNAM 3IO 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID HETNAM MCA METHYLMALONYL-COENZYME A
FORMUL 5 3IO 3(C11 H9 N O3) FORMUL 8 MCA C25 H40 N7 O19 P3 S FORMUL 9 HOH *854(H2 O)
HELIX 1 1 GLY A 8 ARG A 14 1 7 HELIX 2 2 ASP A 34 SER A 36 5 3 HELIX 3 3 THR A 37 THR A 46 1 10 HELIX 4 4 ASN A 51 GLU A 63 1 13 HELIX 5 5 THR A 75 GLU A 76 5 2 HELIX 6 6 ILE A 78 LYS A 80 5 3 HELIX 7 7 ASN A 82 PRO A 83 5 2 HELIX 8 8 VAL A 85 ALA A 87 5 3 HELIX 9 9 SER A 93 GLY A 121 1 29 HELIX 10 10 SER A 123 ILE A 127 5 5 HELIX 11 11 GLY A 142 GLY A 152 1 11 HELIX 12 12 PHE A 168 ASN A 183 1 16 HELIX 13 13 HIS A 208 PHE A 218 1 11 HELIX 14 14 ALA A 273 SER A 291 1 19 HELIX 15 15 ASP A 297 LEU A 301 5 5 HELIX 16 16 GLY A 309 LEU A 320 1 12 HELIX 17 17 LEU A 327 GLY A 338 1 12 HELIX 18 18 MET A 340 SER A 342 5 3 HELIX 19 19 ALA A 343 ASN A 359 1 17 HELIX 20 20 ASP B 34 SER B 36 5 3 HELIX 21 21 THR B 37 THR B 46 1 10 HELIX 22 22 ASN B 51 SER B 65 1 15 HELIX 23 23 ASN B 82 ALA B 87 1 6 HELIX 24 24 SER B 93 ILE B 117 1 25 HELIX 25 25 GLU B 119 GLY B 121 5 3 HELIX 26 26 SER B 123 ILE B 127 5 5 HELIX 27 27 GLY B 142 GLY B 152 1 11 HELIX 28 28 PHE B 168 ASN B 183 1 16 HELIX 29 29 SER B 205 ASP B 210 5 6 HELIX 30 30 SER B 211 PHE B 218 1 8 HELIX 31 31 SER B 253 GLY B 255 5 3 HELIX 32 32 ALA B 273 SER B 291 1 19 HELIX 33 33 ASP B 297 LEU B 301 5 5 HELIX 34 34 GLY B 309 LEU B 320 1 12 HELIX 35 35 LEU B 327 SER B 335 1 9 HELIX 36 36 MET B 340 SER B 342 5 3 HELIX 37 37 ALA B 343 ASN B 359 1 17 HELIX 38 38 ASP C 5 PHE C 6 5 2 HELIX 39 39 GLY C 8 ARG C 10 5 3 HELIX 40 40 LEU C 12 ARG C 14 5 3 HELIX 41 41 ASP C 34 SER C 36 5 3 HELIX 42 42 THR C 37 THR C 46 1 10 HELIX 43 43 ILE C 61 SER C 65 5 5 HELIX 44 44 ASN C 82 ALA C 87 1 6 HELIX 45 45 SER C 93 GLY C 121 1 29 HELIX 46 46 SER C 123 ILE C 127 5 5 HELIX 47 47 GLY C 142 LEU C 151 1 10 HELIX 48 48 PHE C 168 ASN C 184 1 17 HELIX 49 49 THR C 196 THR C 200 5 5 HELIX 50 50 SER C 211 PHE C 218 1 8 HELIX 51 51 ALA C 273 SER C 291 1 19 HELIX 52 52 ASP C 297 LEU C 301 5 5 HELIX 53 53 GLY C 309 LEU C 320 1 12 HELIX 54 54 LEU C 327 SER C 335 1 9 HELIX 55 55 MET C 340 SER C 342 5 3 HELIX 56 56 ALA C 343 ASN C 359 1 17 HELIX 57 57 PHE D 9 ARG D 10 5 2 HELIX 58 58 LEU D 12 ARG D 14 5 3 HELIX 59 59 ASP D 34 SER D 36 5 3 HELIX 60 60 THR D 37 THR D 46 1 10 HELIX 61 61 LYS D 57 PHE D 58 5 2 HELIX 62 62 ARG D 60 CYS D 62 5 3 HELIX 63 63 ASN D 82 ALA D 87 1 6 HELIX 64 64 SER D 93 ILE D 117 1 25 HELIX 65 65 GLU D 119 GLY D 121 5 3 HELIX 66 66 SER D 123 ILE D 127 5 5 HELIX 67 67 GLY D 142 GLY D 152 1 11 HELIX 68 68 PHE D 168 ASN D 184 1 17 HELIX 69 69 HIS D 208 PHE D 218 1 11 HELIX 70 70 ALA D 273 SER D 291 1 19 HELIX 71 71 ASP D 297 LEU D 301 5 5 HELIX 72 72 GLY D 309 ASN D 321 1 13 HELIX 73 73 LEU D 327 SER D 335 1 9 HELIX 74 74 MET D 340 SER D 342 5 3 HELIX 75 75 ALA D 343 ARG D 353 1 11 HELIX 76 76 ALA D 355 LEU D 357 5 3
SHEET 1 A 9 LYS A 158 PHE A 163 0 SHEET 2 A 9 HIS A 129 SER A 134 1 N PHE A 132 O VAL A 162 SHEET 3 A 9 VAL A 189 GLU A 195 1 O ILE A 192 N CYS A 133 SHEET 4 A 9 GLY A 221 GLY A 228 -1 O VAL A 227 N VAL A 189 SHEET 5 A 9 ALA A 19 ALA A 27 -1 N LEU A 22 O ILE A 226 SHEET 6 A 9 PHE A 240 VAL A 249 -1 O ILE A 242 N ALA A 19 SHEET 7 A 9 THR A 381 SER A 389 -1 O VAL A 386 N TRP A 244 SHEET 8 A 9 MET A 370 GLY A 377 -1 N GLY A 371 O LEU A 387 SHEET 9 A 9 PHE A 302 VAL A 305 1 N VAL A 304 O PHE A 374 SHEET 1 B 2 ALA A 32 VAL A 33 0 SHEET 2 B 2 ARG A 70 TYR A 71 -1 O ARG A 70 N VAL A 33 SHEET 1 C 3 ASP A 139 LEU A 140 0 SHEET 2 C 3 ILE B 257 ARG B 262 -1 O GLY B 259 N LEU A 140 SHEET 3 C 3 GLY B 265 LEU B 270 -1 O THR B 267 N LYS B 260 SHEET 1 D 3 GLY A 265 GLN A 269 0 SHEET 2 D 3 GLY A 258 ARG A 262 -1 N GLY A 258 O GLN A 269 SHEET 3 D 3 ASP B 139 LEU B 140 -1 O LEU B 140 N GLY A 259 SHEET 1 E 9 LYS B 158 PHE B 163 0 SHEET 2 E 9 HIS B 129 SER B 134 1 N PHE B 132 O VAL B 162 SHEET 3 E 9 ARG B 188 GLU B 195 1 O ILE B 192 N CYS B 133 SHEET 4 E 9 GLY B 221 GLY B 228 -1 O VAL B 227 N VAL B 189 SHEET 5 E 9 ALA B 19 ALA B 27 -1 N LEU B 22 O ILE B 226 SHEET 6 E 9 PHE B 240 VAL B 249 -1 O ILE B 242 N ALA B 19 SHEET 7 E 9 THR B 381 SER B 389 -1 O VAL B 386 N TRP B 244 SHEET 8 E 9 MET B 370 GLY B 377 -1 N GLY B 371 O LEU B 387 SHEET 9 E 9 PHE B 302 VAL B 305 1 N VAL B 304 O PHE B 374 SHEET 1 F 2 ALA B 32 VAL B 33 0 SHEET 2 F 2 ARG B 70 TYR B 71 -1 O ARG B 70 N VAL B 33 SHEET 1 G 9 LYS C 158 PHE C 163 0 SHEET 2 G 9 HIS C 129 SER C 134 1 N PHE C 132 O VAL C 162 SHEET 3 G 9 ARG C 188 GLU C 195 1 O ILE C 192 N CYS C 133 SHEET 4 G 9 GLY C 221 GLY C 228 -1 O VAL C 227 N VAL C 189 SHEET 5 G 9 SER C 20 ALA C 27 -1 N LEU C 22 O ILE C 226 SHEET 6 G 9 PHE C 240 VAL C 249 -1 O PHE C 240 N ILE C 21 SHEET 7 G 9 THR C 381 SER C 389 -1 O VAL C 386 N TRP C 244 SHEET 8 G 9 MET C 370 GLY C 377 -1 N GLY C 371 O LEU C 387 SHEET 9 G 9 PHE C 302 VAL C 305 1 N VAL C 304 O PHE C 374 SHEET 1 H 2 ALA C 32 VAL C 33 0 SHEET 2 H 2 ARG C 70 TYR C 71 -1 O ARG C 70 N VAL C 33 SHEET 1 I 3 ASP C 139 LEU C 140 0 SHEET 2 I 3 GLY D 259 ARG D 262 -1 O GLY D 259 N LEU C 140 SHEET 3 I 3 GLY D 265 THR D 267 -1 O GLY D 265 N ARG D 262 SHEET 1 J 3 GLY C 265 THR C 267 0 SHEET 2 J 3 GLY C 259 ARG C 262 -1 N LYS C 260 O THR C 267 SHEET 3 J 3 ASP D 139 LEU D 140 -1 O LEU D 140 N GLY C 259 SHEET 1 K 9 LYS D 158 PHE D 163 0 SHEET 2 K 9 HIS D 129 SER D 134 1 N PHE D 132 O VAL D 162 SHEET 3 K 9 ARG D 188 GLU D 195 1 O ILE D 192 N CYS D 133 SHEET 4 K 9 GLY D 221 GLY D 228 -1 O VAL D 227 N VAL D 189 SHEET 5 K 9 ALA D 19 ALA D 27 -1 N LEU D 22 O ILE D 226 SHEET 6 K 9 PHE D 240 VAL D 249 -1 O ILE D 242 N ALA D 19 SHEET 7 K 9 THR D 381 SER D 389 -1 O VAL D 386 N TRP D 244 SHEET 8 K 9 MET D 370 GLY D 377 -1 N GLY D 371 O LEU D 387 SHEET 9 K 9 PHE D 302 VAL D 305 1 N VAL D 304 O PHE D 374 SHEET 1 L 2 ALA D 32 VAL D 33 0 SHEET 2 L 2 ARG D 70 TYR D 71 -1 O ARG D 70 N VAL D 33
CISPEP 1 LEU A 140 PRO A 141 0 0.32 CISPEP 2 GLY A 379 LEU A 380 0 -0.52 CISPEP 3 LEU B 140 PRO B 141 0 0.29 CISPEP 4 GLY B 379 LEU B 380 0 -0.75 CISPEP 5 LEU C 140 PRO C 141 0 0.58 CISPEP 6 GLY C 379 LEU C 380 0 -0.23 CISPEP 7 LEU D 140 PRO D 141 0 0.56 CISPEP 8 GLY D 379 LEU D 380 0 0.30
SITE 1 AC1 11 CYS B 167 PHE B 218 ILE B 257 GLY B 258 SITE 2 AC1 11 PHE B 268 HIS B 306 ASN B 339 PHE B 376 SITE 3 AC1 11 HOH B2062 HOH B2136 HOH B2159 SITE 1 AC2 9 CYS C 167 PHE C 218 ILE C 257 GLY C 258 SITE 2 AC2 9 HIS C 306 GLY C 308 ASN C 339 PHE C 376 SITE 3 AC2 9 HOH C3155 SITE 1 AC3 11 THR D 135 CYS D 167 PHE D 218 ILE D 257 SITE 2 AC3 11 LEU D 266 PHE D 268 HIS D 306 ASN D 339 SITE 3 AC3 11 PHE D 376 MCA D4001 HOH D4195 SITE 1 AC4 19 LYS D 57 ARG D 60 ILE D 61 ARG D 64 SITE 2 AC4 19 LEU D 209 ASP D 210 VAL D 213 ILE D 257 SITE 3 AC4 19 LEU D 270 GLY D 308 GLY D 309 ARG D 310 SITE 4 AC4 19 ALA D 311 ILE D 312 3IO D4000 HOH D4158 SITE 5 AC4 19 HOH D4171 HOH D4173 HOH D4174
CRYST1 54.465 111.190 132.015 90.00 93.13 90.00 P 1 21 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.018360 0.000000 0.001004 0.00000
SCALE2 0.000000 0.008994 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007586 0.00000