10 20 30 40 50 60 70 80 1XB7 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 30-AUG-04 1XB7
TITLE X-RAY STRUCTURE OF ERRALPHA LBD IN COMPLEX WITH A PGC- TITLE 2 1ALPHA PEPTIDE AT 2.5A RESOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: STEROID HORMONE RECEPTOR ERR1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN; COMPND 5 SYNONYM: ESTROGEN-RELATED RECEPTOR, ALPHA; ERR-ALPHA; COMPND 6 NR3B1; ESTROGEN RECEPTOR-LIKE 1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COMPND 10 COACTIVATOR 1 ALPHA; COMPND 11 CHAIN: P; COMPND 12 FRAGMENT: COACTIVATOR PEPTIDE (L3-SITE); COMPND 13 SYNONYM: PPAR GAMMA COACTIVATOR-1 ALPHA, PPARGC-1 ALPHA, COMPND 14 PGC-1 ALPHA, LIGAND EFFECT MODULATOR-6; COMPND 15 ENGINEERED: YES; COMPND 16 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: BACPAK8; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: MUTATED PGC-1ALPHA COACTIVATOR PEPTIDE (L3- SOURCE 14 SITE) ORDERED FROM NEOSYSTEM, FRANCE
KEYWDS NUCLEAR HORMONE RECEPTOR, LIGAND BINDING DOMAIN, THREE- KEYWDS 2 LAYERED ALPHA-HELICAL SANDWICH, COACTIVATOR PEPTIDE, KEYWDS 3 AMPHIPATHIC ALPHA-HELIX, TRANSCRIPTION
EXPDTA X-RAY DIFFRACTION
AUTHOR J.KALLEN,J.M.SCHLAEPPI,F.BITSCH,I.FILIPUZZI,A.SCHILB,V.RIOU, AUTHOR 2 A.GRAHAM,A.STRAUSS,M.GEISER,B.FOURNIER
REVDAT 3 24-FEB-09 1XB7 1 VERSN REVDAT 2 07-DEC-04 1XB7 1 JRNL REVDAT 1 14-SEP-04 1XB7 0
JRNL AUTH J.KALLEN,J.M.SCHLAEPPI,F.BITSCH,I.FILIPUZZI, JRNL AUTH 2 A.SCHILB,V.RIOU,A.GRAHAM,A.STRAUSS,M.GEISER, JRNL AUTH 3 B.FOURNIER JRNL TITL EVIDENCE FOR LIGAND-INDEPENDENT TRANSCRIPTIONAL JRNL TITL 2 ACTIVATION OF THE HUMAN ESTROGEN-RELATED RECEPTOR JRNL TITL 3 {ALPHA} (ERR{ALPHA}): CRYSTAL STRUCTURE OF JRNL TITL 4 ERR{ALPHA} LIGAND BINDING DOMAIN IN COMPLEX WITH JRNL TITL 5 PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR JRNL TITL 6 COACTIVATOR-1{ALPHA} JRNL REF J.BIOL.CHEM. V. 279 49330 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15337744 JRNL DOI 10.1074/JBC.M407999200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 12060 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 625 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 829 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1741 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 84 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59000 REMARK 3 B22 (A**2) : -0.59000 REMARK 3 B33 (A**2) : 0.89000 REMARK 3 B12 (A**2) : -0.30000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.345 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.249 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.042 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1763 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1731 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2384 ; 1.447 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3995 ; 0.953 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 220 ; 5.355 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 291 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1911 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 336 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 384 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1842 ; 0.222 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1043 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 52 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.167 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 37 ; 0.280 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.339 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1110 ; 0.830 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1766 ; 1.599 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 653 ; 2.104 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 618 ; 3.798 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 1XB7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-SEP-04. REMARK 100 THE RCSB ID CODE IS RCSB030161.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12704 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 12.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.41000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1KV6 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, KI, PEG4000, MES, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.78067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.89033 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.33550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.44517 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 87.22583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 69.78067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 34.89033 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 17.44517 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 52.33550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 87.22583 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED FROM THE REMARK 300 MONOMER IN THE ASYMMETRIC UNIT.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.89033
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 I IOD P 101 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 23 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 273 REMARK 465 SER A 274 REMARK 465 SER A 275 REMARK 465 HIS A 276 REMARK 465 HIS A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 PRO A 309 REMARK 465 ASP A 310 REMARK 465 PRO A 311 REMARK 465 ALA A 312 REMARK 465 GLY A 313 REMARK 465 PRO A 314 REMARK 465 ASP A 315 REMARK 465 GLY A 316 REMARK 465 HIS A 317 REMARK 465 LEU A 318 REMARK 465 PRO A 319 REMARK 465 ARG A 462 REMARK 465 ALA A 463 REMARK 465 GLY A 464 REMARK 465 PRO A 465 REMARK 465 GLY A 466 REMARK 465 GLY A 467 REMARK 465 GLY A 468 REMARK 465 ALA A 469 REMARK 465 GLU A 470 REMARK 465 MET A 517 REMARK 465 MET A 518 REMARK 465 ASP A 519 REMARK 465 ARG P 205 REMARK 465 PRO P 206 REMARK 465 ALA P 207
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 515 CG CD OE1 OE2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 352 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 472 -3.10 -159.67 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1XB7 A 290 519 UNP P11474 ERR1_HUMAN 290 519 DBREF 1XB7 P 205 216 UNP Q9UBK2 PRGC1_HUMAN 205 216
SEQADV 1XB7 GLY A 273 UNP P11474 EXPRESSION TAG SEQADV 1XB7 SER A 274 UNP P11474 EXPRESSION TAG SEQADV 1XB7 SER A 275 UNP P11474 EXPRESSION TAG SEQADV 1XB7 HIS A 276 UNP P11474 EXPRESSION TAG SEQADV 1XB7 HIS A 277 UNP P11474 EXPRESSION TAG SEQADV 1XB7 HIS A 278 UNP P11474 EXPRESSION TAG SEQADV 1XB7 HIS A 279 UNP P11474 EXPRESSION TAG SEQADV 1XB7 HIS A 280 UNP P11474 EXPRESSION TAG SEQADV 1XB7 HIS A 281 UNP P11474 EXPRESSION TAG SEQADV 1XB7 LEU A 282 UNP P11474 EXPRESSION TAG SEQADV 1XB7 GLU A 283 UNP P11474 EXPRESSION TAG SEQADV 1XB7 VAL A 284 UNP P11474 EXPRESSION TAG SEQADV 1XB7 LEU A 285 UNP P11474 EXPRESSION TAG SEQADV 1XB7 PHE A 286 UNP P11474 EXPRESSION TAG SEQADV 1XB7 GLN A 287 UNP P11474 EXPRESSION TAG SEQADV 1XB7 GLY A 288 UNP P11474 EXPRESSION TAG SEQADV 1XB7 PRO A 289 UNP P11474 EXPRESSION TAG SEQADV 1XB7 ALA P 207 UNP Q9UBK2 CYS 207 ENGINEERED
SEQRES 1 A 247 GLY SER SER HIS HIS HIS HIS HIS HIS LEU GLU VAL LEU SEQRES 2 A 247 PHE GLN GLY PRO VAL ASN ALA LEU VAL SER HIS LEU LEU SEQRES 3 A 247 VAL VAL GLU PRO GLU LYS LEU TYR ALA MET PRO ASP PRO SEQRES 4 A 247 ALA GLY PRO ASP GLY HIS LEU PRO ALA VAL ALA THR LEU SEQRES 5 A 247 CYS ASP LEU PHE ASP ARG GLU ILE VAL VAL THR ILE SER SEQRES 6 A 247 TRP ALA LYS SER ILE PRO GLY PHE SER SER LEU SER LEU SEQRES 7 A 247 SER ASP GLN MET SER VAL LEU GLN SER VAL TRP MET GLU SEQRES 8 A 247 VAL LEU VAL LEU GLY VAL ALA GLN ARG SER LEU PRO LEU SEQRES 9 A 247 GLN ASP GLU LEU ALA PHE ALA GLU ASP LEU VAL LEU ASP SEQRES 10 A 247 GLU GLU GLY ALA ARG ALA ALA GLY LEU GLY GLU LEU GLY SEQRES 11 A 247 ALA ALA LEU LEU GLN LEU VAL ARG ARG LEU GLN ALA LEU SEQRES 12 A 247 ARG LEU GLU ARG GLU GLU TYR VAL LEU LEU LYS ALA LEU SEQRES 13 A 247 ALA LEU ALA ASN SER ASP SER VAL HIS ILE GLU ASP ALA SEQRES 14 A 247 GLU ALA VAL GLU GLN LEU ARG GLU ALA LEU HIS GLU ALA SEQRES 15 A 247 LEU LEU GLU TYR GLU ALA GLY ARG ALA GLY PRO GLY GLY SEQRES 16 A 247 GLY ALA GLU ARG ARG ARG ALA GLY ARG LEU LEU LEU THR SEQRES 17 A 247 LEU PRO LEU LEU ARG GLN THR ALA GLY LYS VAL LEU ALA SEQRES 18 A 247 HIS PHE TYR GLY VAL LYS LEU GLU GLY LYS VAL PRO MET SEQRES 19 A 247 HIS LYS LEU PHE LEU GLU MET LEU GLU ALA MET MET ASP SEQRES 1 P 12 ARG PRO ALA SER GLU LEU LEU LYS TYR LEU THR THR
HET IOD P 101 1
HETNAM IOD IODIDE ION
FORMUL 3 IOD I 1- FORMUL 4 HOH *84(H2 O)
HELIX 1 1 LEU A 282 GLN A 287 5 6 HELIX 2 2 PRO A 289 VAL A 300 1 12 HELIX 3 3 VAL A 321 SER A 341 1 21 HELIX 4 4 GLY A 344 LEU A 348 5 5 HELIX 5 5 SER A 349 LEU A 374 1 26 HELIX 6 6 GLU A 390 ALA A 396 1 7 HELIX 7 7 GLU A 400 ARG A 416 1 17 HELIX 8 8 GLU A 418 ASN A 432 1 15 HELIX 9 9 ASP A 440 GLY A 461 1 22 HELIX 10 10 ARG A 472 LEU A 479 1 8 HELIX 11 11 THR A 480 GLY A 502 1 23 HELIX 12 12 HIS A 507 ALA A 516 1 10 HELIX 13 13 SER P 208 THR P 215 1 8
SHEET 1 A 2 GLU A 379 ALA A 383 0 SHEET 2 A 2 LEU A 386 ASP A 389 -1 O LEU A 388 N LEU A 380
CRYST1 109.999 109.999 104.671 90.00 90.00 120.00 P 65 2 2 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009091 0.005249 0.000000 0.00000
SCALE2 0.000000 0.010497 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009554 0.00000