1X6W - Header Asymmetric Unit

HEADER DNA 12-AUG-04 1X6W

TITLE SOLUTION STRUCTURE OF THE DNA DUPLEX TGCGCA:TGCGCA CAPPED TITLE 2 BY TRIMETHOXYSTILBENE RESIDUES

COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*(TMS)P*TP*GP*CP*GP*CP*A)-3'; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES

KEYWDS DNA, TRIMETHOXYSTILBENE, SYNTHETIC HYBRID

EXPDTA SOLUTION NMR

NUMMDL 2

MDLTYP MINIMIZED AVERAGE

AUTHOR J.TUMA,R.PAULINI,J.STTZ,C.RICHERT

REVDAT 2 24-FEB-09 1X6W 1 VERSN REVDAT 1 05-OCT-04 1X6W 0

JRNL AUTH J.TUMA,R.PAULINI,J.A.ROJAS STUTZ,C.RICHERT JRNL TITL HOW MUCH PI-STACKING DO DNA TERMINI SEEK? SOLUTION JRNL TITL 2 STRUCTURE OF A SELF-COMPLEMENTARY DNA HEXAMER WITH JRNL TITL 3 TRIMETHOXYSTILBENES CAPPING THE TERMINAL BASE JRNL TITL 4 PAIRS. JRNL REF BIOCHEMISTRY V. 43 15680 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15595824 JRNL DOI 10.1021/BI048205Y

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1X6W COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB030014.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288; 288 REMARK 210 PH : 7; 7 REMARK 210 IONIC STRENGTH : 165 MM PHOSPHAT BUFFER REMARK 210 (KH2PO4/K2HPO4), NACL AT PH 7 REMARK 210 (UNCORRECTED FOR DEUTERIUM REMARK 210 EFFECT); 165 MM PHOSPHAT REMARK 210 BUFFER (KH2PO4/K2HPO4), NACL REMARK 210 AT PH 7 (UNCORRECTED FOR REMARK 210 DEUTERIUM EFFECT) REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : ANALYTE BUFFER, SALT, D2O; REMARK 210 ANALYTE BUFFER, SALT, H2O/D2O REMARK 210 (85:15) REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, DQF-COSY, TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.0 REMARK 210 METHOD USED : TORSION-ANGLE MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 2 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

DBREF 1X6W A 1 7 PDB 1X6W 1X6W 1 7 DBREF 1X6W B 1 7 PDB 1X6W 1X6W 1 7

SEQRES 1 A 7 TMS DT DG DC DG DC DA SEQRES 1 B 7 TMS DT DG DC DG DC DA

HET TMS A 1 51 HET TMS B 1 51

HETNAM TMS N-PROPYL-4-[(E)-2-(3,4,5-TRIMETHOXY-PHENYL)-VINYL]- HETNAM 2 TMS BENZAMIDE

FORMUL 1 TMS 2(C21 H25 N O5)

LINK O2 TMS A 1 P DT A 2 1555 1555 1.49 LINK O2 TMS B 1 P DT B 2 1555 1555 1.49

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000