10 20 30 40 50 60 70 80 1X5O - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 16-MAY-05 1X5O
TITLE SOLUTION STRUCTURE OF RRM DOMAIN IN RNA BINDING MOTIF, TITLE 2 SINGLE-STRANDED INTERACTING PROTEIN 1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA BINDING MOTIF, SINGLE-STRANDED INTERACTING COMPND 3 PROTEIN 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RRM DOMAIN; COMPND 6 SYNONYM: SINGLE- STRANDED DNA-BINDING PROTEIN MSSP-1, COMPND 7 SUPPRESSOR OF CDC2 WITH RNA BINDING MOTIF 2; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RBMS1, MSSP, MSSP1, SCR2; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041108-09; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS NMR, STRUCTURE GENOMICS, RRM DOMAIN, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, RNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 1X5O 1 VERSN REVDAT 1 16-NOV-05 1X5O 0
JRNL AUTH W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RRM DOMAIN IN RNA BINDING JRNL TITL 2 MOTIF, SINGLE-STRANDED INTERACTING PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1X5O COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024410.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8MM U-15,13C; 20MM REMARK 210 PHOSPHATE BUFFER NA; 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.925, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 8 96.15 -37.10 REMARK 500 1 ASP A 24 73.87 -109.68 REMARK 500 1 PRO A 48 2.86 -69.78 REMARK 500 1 SER A 65 148.84 -36.54 REMARK 500 1 VAL A 82 -71.42 -55.97 REMARK 500 1 HIS A 85 -70.72 -92.69 REMARK 500 1 ASN A 87 96.71 -46.51 REMARK 500 1 PRO A 95 98.91 -69.70 REMARK 500 1 PRO A 103 -169.14 -69.78 REMARK 500 1 SER A 112 -65.01 -94.51 REMARK 500 2 GLN A 14 -179.44 -170.04 REMARK 500 2 GLN A 16 131.98 -174.60 REMARK 500 2 GLU A 39 -19.12 -48.82 REMARK 500 2 PRO A 48 2.46 -69.73 REMARK 500 2 SER A 65 147.72 -34.94 REMARK 500 2 HIS A 85 -72.47 -90.68 REMARK 500 2 ASN A 87 97.91 -38.25 REMARK 500 2 PRO A 95 91.21 -69.78 REMARK 500 2 PRO A 111 91.52 -69.76 REMARK 500 2 SER A 112 45.09 36.12 REMARK 500 3 SER A 6 159.06 -44.03 REMARK 500 3 LEU A 42 -31.75 -39.37 REMARK 500 3 PRO A 48 2.58 -69.77 REMARK 500 3 GLU A 77 -37.66 -37.39 REMARK 500 3 HIS A 85 -72.36 -91.27 REMARK 500 3 ASN A 87 95.93 -39.92 REMARK 500 3 PRO A 111 85.55 -69.76 REMARK 500 4 SER A 2 105.84 -168.70 REMARK 500 4 SER A 6 -44.10 -130.44 REMARK 500 4 SER A 11 105.88 -57.98 REMARK 500 4 GLN A 14 -68.91 -91.50 REMARK 500 4 GLN A 16 40.60 -88.81 REMARK 500 4 ALA A 18 41.24 34.17 REMARK 500 4 GLU A 22 171.04 -46.77 REMARK 500 4 GLN A 23 35.20 -89.72 REMARK 500 4 ASP A 24 71.45 -117.38 REMARK 500 4 THR A 26 -33.92 -39.60 REMARK 500 4 GLU A 39 -30.97 -38.24 REMARK 500 4 LEU A 42 -30.16 -38.85 REMARK 500 4 PRO A 48 2.34 -69.83 REMARK 500 4 SER A 65 153.11 -42.02 REMARK 500 4 SER A 75 -178.03 -170.21 REMARK 500 4 HIS A 85 -72.56 -92.83 REMARK 500 4 ASN A 87 103.12 -34.36 REMARK 500 5 PRO A 48 2.79 -69.79 REMARK 500 5 SER A 65 146.60 -35.52 REMARK 500 5 HIS A 85 -71.37 -89.97 REMARK 500 5 ASN A 87 105.73 -36.50 REMARK 500 5 PHE A 108 105.35 -54.76 REMARK 500 6 LEU A 8 53.14 35.30 REMARK 500 6 MET A 17 133.82 -39.29 REMARK 500 6 ALA A 18 92.31 -47.07 REMARK 500 6 ASP A 24 64.26 -115.71 REMARK 500 6 PRO A 48 2.22 -69.74 REMARK 500 6 SER A 65 151.93 -46.11 REMARK 500 6 HIS A 85 -70.53 -90.83 REMARK 500 6 ASN A 87 100.89 -41.40 REMARK 500 6 PRO A 95 98.89 -69.86 REMARK 500 6 PRO A 103 -176.45 -69.77 REMARK 500 6 SER A 109 -74.83 -81.13 REMARK 500 7 GLN A 20 157.68 -46.26 REMARK 500 7 ASP A 24 70.50 -108.19 REMARK 500 7 PRO A 48 2.14 -69.74 REMARK 500 7 SER A 75 -177.31 -171.24 REMARK 500 7 GLU A 77 -38.23 -38.65 REMARK 500 7 HIS A 85 -72.48 -90.88 REMARK 500 7 ASN A 87 96.39 -40.04 REMARK 500 7 PRO A 103 -171.65 -69.77 REMARK 500 7 PHE A 108 104.36 -54.86 REMARK 500 7 SER A 109 -72.77 -57.75 REMARK 500 8 LEU A 8 -53.93 -132.42 REMARK 500 8 GLU A 39 -33.63 -35.27 REMARK 500 8 LEU A 42 -28.46 -37.93 REMARK 500 8 PRO A 48 2.37 -69.74 REMARK 500 8 SER A 65 140.62 -35.49 REMARK 500 8 HIS A 85 -72.51 -93.46 REMARK 500 8 ASN A 87 94.91 -37.97 REMARK 500 8 PRO A 95 88.01 -69.70 REMARK 500 9 MET A 17 47.64 -106.36 REMARK 500 9 PRO A 25 0.15 -69.75 REMARK 500 9 THR A 26 -32.25 -36.71 REMARK 500 9 GLU A 39 -29.12 -38.87 REMARK 500 9 PRO A 48 2.94 -69.81 REMARK 500 9 SER A 65 147.41 -37.94 REMARK 500 9 HIS A 85 -70.38 -93.56 REMARK 500 9 ASN A 87 95.90 -43.38 REMARK 500 9 SER A 109 -71.60 -80.19 REMARK 500 10 SER A 11 160.28 -44.70 REMARK 500 10 GLU A 22 155.01 -44.82 REMARK 500 10 PRO A 48 0.06 -69.79 REMARK 500 10 HIS A 85 -72.50 -90.44 REMARK 500 10 ASN A 87 97.10 -39.82 REMARK 500 10 PRO A 95 89.58 -69.82 REMARK 500 10 PRO A 103 -177.03 -69.82 REMARK 500 11 GLN A 14 158.40 -45.86 REMARK 500 11 GLU A 22 137.09 -35.12 REMARK 500 11 GLU A 39 -37.38 -37.92 REMARK 500 11 PRO A 48 2.94 -69.82 REMARK 500 11 SER A 65 147.54 -35.44 REMARK 500 11 GLU A 74 -32.64 -37.16 REMARK 500 11 HIS A 85 -72.22 -90.04 REMARK 500 11 ASN A 87 97.85 -36.86 REMARK 500 11 PRO A 95 92.07 -69.79 REMARK 500 11 PRO A 103 -165.25 -69.76 REMARK 500 11 PHE A 108 108.27 -35.57 REMARK 500 11 SER A 112 44.52 -80.28 REMARK 500 11 SER A 113 41.65 -102.68 REMARK 500 12 PRO A 48 2.21 -69.79 REMARK 500 12 GLN A 51 105.95 -55.46 REMARK 500 12 SER A 65 147.23 -35.85 REMARK 500 12 HIS A 85 -72.48 -91.10 REMARK 500 12 ASN A 87 92.71 -39.14 REMARK 500 12 PHE A 108 96.65 -45.20 REMARK 500 13 MET A 17 95.12 -62.85 REMARK 500 13 GLN A 23 98.82 -38.24 REMARK 500 13 ASP A 24 72.65 -107.42 REMARK 500 13 GLU A 39 -28.17 -37.89 REMARK 500 13 PRO A 48 2.47 -69.76 REMARK 500 13 SER A 65 150.06 -36.16 REMARK 500 13 HIS A 85 -72.67 -85.08 REMARK 500 13 ASN A 87 95.28 -40.57 REMARK 500 13 PRO A 103 -173.82 -69.75 REMARK 500 13 PHE A 108 103.47 -47.22 REMARK 500 14 LEU A 8 27.41 45.60 REMARK 500 14 LYS A 9 150.26 -46.85 REMARK 500 14 ALA A 10 51.59 -100.50 REMARK 500 14 LEU A 42 -30.89 -38.60 REMARK 500 14 PRO A 48 2.82 -69.76 REMARK 500 14 GLN A 51 95.51 -68.94 REMARK 500 14 SER A 65 144.49 -35.73 REMARK 500 14 HIS A 85 -71.15 -86.76 REMARK 500 14 ASN A 87 89.18 -49.55 REMARK 500 14 PRO A 95 98.14 -69.80 REMARK 500 15 ALA A 18 -66.65 -100.71 REMARK 500 15 GLU A 22 119.68 -37.62 REMARK 500 15 PRO A 25 2.84 -69.80 REMARK 500 15 GLU A 39 -30.21 -38.55 REMARK 500 15 PRO A 48 2.75 -69.78 REMARK 500 15 SER A 65 142.15 -37.07 REMARK 500 15 GLU A 77 -35.50 -39.00 REMARK 500 15 HIS A 85 -70.67 -93.56 REMARK 500 15 ASN A 87 99.02 -34.59 REMARK 500 15 PRO A 95 97.56 -69.73 REMARK 500 15 PRO A 103 -172.50 -69.80 REMARK 500 15 PHE A 108 92.88 -52.00 REMARK 500 16 SER A 5 94.24 -52.59 REMARK 500 16 SER A 6 144.58 -35.64 REMARK 500 16 GLU A 39 -30.90 -38.09 REMARK 500 16 LEU A 42 -32.06 -38.94 REMARK 500 16 PRO A 48 1.34 -69.82 REMARK 500 16 SER A 65 126.91 -37.97 REMARK 500 16 HIS A 85 -72.49 -92.78 REMARK 500 16 ASN A 87 94.44 -36.95 REMARK 500 16 PRO A 95 97.36 -69.70 REMARK 500 16 PRO A 100 -179.43 -69.80 REMARK 500 17 SER A 6 116.78 -167.70 REMARK 500 17 ALA A 10 96.98 -58.60 REMARK 500 17 GLU A 39 -39.13 -35.82 REMARK 500 17 PRO A 48 2.39 -69.70 REMARK 500 17 SER A 65 145.23 -36.47 REMARK 500 17 SER A 75 -176.74 -171.12 REMARK 500 17 GLU A 77 -36.00 -37.79 REMARK 500 17 HIS A 85 -72.78 -91.09 REMARK 500 17 ASN A 87 94.39 -34.95 REMARK 500 17 PRO A 95 92.14 -69.73 REMARK 500 17 PRO A 111 85.87 -69.73 REMARK 500 18 SER A 3 -58.69 -122.09 REMARK 500 18 LYS A 9 156.70 -49.71 REMARK 500 18 GLN A 23 129.39 -34.51 REMARK 500 18 PRO A 25 1.17 -69.75 REMARK 500 18 GLU A 39 -27.05 -39.38 REMARK 500 18 PRO A 48 2.41 -69.78 REMARK 500 18 SER A 65 149.02 -38.45 REMARK 500 18 HIS A 85 -70.55 -92.72 REMARK 500 18 ASN A 87 102.87 -36.74 REMARK 500 18 PRO A 95 87.60 -69.71 REMARK 500 18 PHE A 108 99.86 -49.09 REMARK 500 18 SER A 112 142.91 -39.05 REMARK 500 19 GLN A 23 44.66 -90.58 REMARK 500 19 GLU A 39 -28.19 -39.52 REMARK 500 19 PRO A 48 1.55 -69.73 REMARK 500 19 SER A 65 151.71 -39.83 REMARK 500 19 HIS A 85 -72.56 -82.04 REMARK 500 19 ASN A 87 92.76 -45.09 REMARK 500 19 PRO A 95 99.86 -69.72 REMARK 500 19 PHE A 108 115.26 -37.27 REMARK 500 19 PRO A 111 98.79 -69.82 REMARK 500 20 GLU A 22 152.55 -48.28 REMARK 500 20 PRO A 48 3.14 -69.81 REMARK 500 20 SER A 65 148.37 -38.24 REMARK 500 20 SER A 75 -179.23 -174.97 REMARK 500 20 HIS A 85 -72.59 -92.04 REMARK 500 20 ASN A 87 97.16 -34.43 REMARK 500 20 PRO A 95 98.17 -69.75 REMARK 500 20 PRO A 103 -165.84 -69.80 REMARK 500 20 PHE A 108 105.20 -57.84 REMARK 500 20 SER A 109 -178.86 -55.06 REMARK 500 20 PRO A 111 1.67 -69.76 REMARK 500 20 SER A 112 123.36 -35.20 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002012909.1 RELATED DB: TARGETDB
DBREF 1X5O A 8 108 UNP P29558 RBMS1_HUMAN 123 223
SEQADV 1X5O GLY A 1 UNP P29558 CLONING ARTIFACT SEQADV 1X5O SER A 2 UNP P29558 CLONING ARTIFACT SEQADV 1X5O SER A 3 UNP P29558 CLONING ARTIFACT SEQADV 1X5O GLY A 4 UNP P29558 CLONING ARTIFACT SEQADV 1X5O SER A 5 UNP P29558 CLONING ARTIFACT SEQADV 1X5O SER A 6 UNP P29558 CLONING ARTIFACT SEQADV 1X5O GLY A 7 UNP P29558 CLONING ARTIFACT SEQADV 1X5O SER A 109 UNP P29558 CLONING ARTIFACT SEQADV 1X5O GLY A 110 UNP P29558 CLONING ARTIFACT SEQADV 1X5O PRO A 111 UNP P29558 CLONING ARTIFACT SEQADV 1X5O SER A 112 UNP P29558 CLONING ARTIFACT SEQADV 1X5O SER A 113 UNP P29558 CLONING ARTIFACT SEQADV 1X5O GLY A 114 UNP P29558 CLONING ARTIFACT
SEQRES 1 A 114 GLY SER SER GLY SER SER GLY LEU LYS ALA SER GLY VAL SEQRES 2 A 114 GLN ALA GLN MET ALA LYS GLN GLN GLU GLN ASP PRO THR SEQRES 3 A 114 ASN LEU TYR ILE SER ASN LEU PRO LEU SER MET ASP GLU SEQRES 4 A 114 GLN GLU LEU GLU ASN MET LEU LYS PRO PHE GLY GLN VAL SEQRES 5 A 114 ILE SER THR ARG ILE LEU ARG ASP SER SER GLY THR SER SEQRES 6 A 114 ARG GLY VAL GLY PHE ALA ARG MET GLU SER THR GLU LYS SEQRES 7 A 114 CYS GLU ALA VAL ILE GLY HIS PHE ASN GLY LYS PHE ILE SEQRES 8 A 114 LYS THR PRO PRO GLY VAL SER ALA PRO THR GLU PRO LEU SEQRES 9 A 114 LEU CYS LYS PHE SER GLY PRO SER SER GLY
HELIX 1 1 GLU A 39 ASN A 44 1 6 HELIX 2 2 THR A 76 PHE A 86 1 11
SHEET 1 A 4 VAL A 52 ARG A 59 0 SHEET 2 A 4 SER A 65 MET A 73 -1 O ARG A 66 N LEU A 58 SHEET 3 A 4 ASN A 27 SER A 31 -1 N ILE A 30 O GLY A 69 SHEET 4 A 4 LEU A 105 PHE A 108 -1 O LEU A 105 N SER A 31
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000