10 20 30 40 50 60 70 80 1X5A - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-MAY-05 1X5A
TITLE THE SOLUTION STRUCTURE OF THE SECOND FIBRONECTIN TYPE III TITLE 2 DOMAIN OF MOUSE EPHRIN TYPE-A RECEPTOR 1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPHRIN TYPE-A RECEPTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIBRONECTIN TYPE-III DOMAIN; COMPND 5 SYNONYM: TYROSINE-PROTEIN KINASE RECEPTOR ESK; COMPND 6 EC: 2.7.1.112; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: EPHA1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040719-10; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS TYROSINE-PROTEIN KINASE RECEPTOR, ESK, FIBRONECTIN TYPE III KEYWDS 2 (FN3) DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 3 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 4 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN KEYWDS 5 FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR N.TOCHIO,A.SASAGAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1X5A 1 VERSN REVDAT 1 15-NOV-05 1X5A 0
JRNL AUTH N.TOCHIO,A.SASAGAWA,S.KOSHIBA,M.INOUE,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL THE SOLUTION STRUCTURE OF THE SECOND FIBRONECTIN JRNL TITL 2 TYPE III DOMAIN OF MOUSE EPHRIN TYPE-A RECEPTOR 1 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1X5A COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024396.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM FN3 DOMAIN U-15N,13C; REMARK 210 20MM D-TRIS HCL; 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 177.22 -57.56 REMARK 500 1 SER A 6 167.22 -44.48 REMARK 500 1 SER A 10 41.27 35.56 REMARK 500 1 LEU A 11 145.59 -38.83 REMARK 500 1 SER A 12 40.71 -84.66 REMARK 500 1 LEU A 16 139.22 -37.41 REMARK 500 1 PRO A 35 -175.69 -69.73 REMARK 500 1 ASN A 41 102.17 -37.20 REMARK 500 1 LEU A 42 179.80 -57.35 REMARK 500 1 PRO A 62 1.63 -69.73 REMARK 500 1 SER A 91 155.18 -40.49 REMARK 500 1 ASP A 93 109.79 -40.87 REMARK 500 1 SER A 102 112.46 -38.11 REMARK 500 2 LEU A 16 152.67 -42.88 REMARK 500 2 ASN A 41 38.61 -94.43 REMARK 500 2 PRO A 62 2.86 -69.78 REMARK 500 2 SER A 91 155.01 -40.12 REMARK 500 2 ASP A 93 116.03 -38.06 REMARK 500 2 PRO A 104 0.06 -69.77 REMARK 500 2 SER A 105 150.64 -35.23 REMARK 500 3 SER A 3 43.14 34.79 REMARK 500 3 SER A 5 -58.20 -130.65 REMARK 500 3 SER A 6 135.79 -36.01 REMARK 500 3 ALA A 8 86.22 -65.92 REMARK 500 3 SER A 33 109.28 -54.02 REMARK 500 3 PRO A 62 2.65 -69.75 REMARK 500 3 ASP A 93 119.37 -38.24 REMARK 500 4 PRO A 38 97.20 -69.82 REMARK 500 4 PRO A 62 1.29 -69.80 REMARK 500 4 SER A 91 155.08 -41.33 REMARK 500 5 SER A 3 46.94 35.80 REMARK 500 5 SER A 6 -44.80 -130.21 REMARK 500 5 SER A 12 35.52 39.98 REMARK 500 5 PRO A 62 3.19 -69.72 REMARK 500 5 SER A 91 153.01 -48.12 REMARK 500 5 SER A 102 -61.39 -122.36 REMARK 500 6 ALA A 8 42.87 -87.56 REMARK 500 6 LEU A 16 99.66 -64.96 REMARK 500 6 LEU A 26 118.99 -160.09 REMARK 500 6 ARG A 34 143.18 -37.08 REMARK 500 6 GLN A 51 -75.71 -40.27 REMARK 500 6 PRO A 62 3.41 -69.83 REMARK 500 6 SER A 106 127.86 -39.00 REMARK 500 7 GLU A 9 97.63 -64.73 REMARK 500 7 SER A 10 139.43 -173.61 REMARK 500 7 LEU A 16 103.22 -36.09 REMARK 500 7 ALA A 31 -54.13 -126.24 REMARK 500 7 ARG A 36 77.28 -100.04 REMARK 500 7 PRO A 62 3.04 -69.77 REMARK 500 7 SER A 91 155.78 -37.83 REMARK 500 7 ASP A 93 106.86 -40.47 REMARK 500 7 SER A 102 158.39 -46.30 REMARK 500 8 LEU A 11 49.04 -88.99 REMARK 500 8 SER A 12 37.20 38.05 REMARK 500 8 SER A 15 113.80 -171.78 REMARK 500 8 PRO A 35 -172.48 -69.77 REMARK 500 8 PRO A 38 -178.95 -69.76 REMARK 500 8 PRO A 62 2.14 -69.75 REMARK 500 8 SER A 91 155.85 -48.35 REMARK 500 8 SER A 106 41.62 -100.81 REMARK 500 9 SER A 6 42.64 -84.96 REMARK 500 9 GLU A 9 96.66 -67.37 REMARK 500 9 ASN A 41 161.64 -44.04 REMARK 500 9 PRO A 62 5.35 -69.81 REMARK 500 9 SER A 91 155.79 -39.00 REMARK 500 9 ASP A 93 109.82 -42.17 REMARK 500 10 GLU A 9 39.55 -96.57 REMARK 500 10 SER A 10 40.81 -97.60 REMARK 500 10 SER A 12 42.39 -81.94 REMARK 500 10 LEU A 14 133.88 -33.12 REMARK 500 10 PRO A 35 0.67 -69.78 REMARK 500 10 PRO A 62 3.33 -69.76 REMARK 500 10 SER A 91 154.80 -45.92 REMARK 500 10 ASP A 93 120.29 -35.91 REMARK 500 11 GLU A 9 57.43 -116.08 REMARK 500 11 SER A 10 47.86 -91.24 REMARK 500 11 SER A 12 52.66 -90.09 REMARK 500 11 SER A 33 68.00 -113.39 REMARK 500 11 PRO A 35 -177.64 -69.75 REMARK 500 11 ARG A 36 41.03 -101.26 REMARK 500 11 GLN A 51 -74.68 -35.26 REMARK 500 11 PRO A 62 2.88 -69.67 REMARK 500 11 SER A 91 153.84 -37.59 REMARK 500 11 ASP A 93 99.34 -37.58 REMARK 500 12 SER A 10 -74.20 -81.84 REMARK 500 12 SER A 12 76.85 -59.39 REMARK 500 12 LEU A 14 49.43 25.28 REMARK 500 12 LEU A 16 120.94 -33.92 REMARK 500 12 LEU A 26 112.94 -165.52 REMARK 500 12 PRO A 62 6.89 -69.80 REMARK 500 12 ASP A 93 105.60 -39.86 REMARK 500 13 SER A 12 164.23 -48.59 REMARK 500 13 PRO A 62 4.08 -69.72 REMARK 500 13 ASP A 93 110.21 -38.20 REMARK 500 13 PRO A 104 86.04 -69.71 REMARK 500 13 SER A 105 -64.44 -122.66 REMARK 500 14 SER A 5 -54.07 -124.65 REMARK 500 14 ALA A 8 77.15 -102.79 REMARK 500 14 SER A 33 152.75 -40.44 REMARK 500 14 PRO A 62 3.06 -69.79 REMARK 500 14 SER A 91 155.85 -38.30 REMARK 500 14 ASP A 93 104.63 -38.73 REMARK 500 15 SER A 10 40.99 -101.96 REMARK 500 15 PRO A 35 1.28 -69.83 REMARK 500 15 ARG A 36 86.01 -65.39 REMARK 500 15 PRO A 38 0.94 -69.73 REMARK 500 15 GLN A 51 -70.45 -42.80 REMARK 500 15 PRO A 62 3.53 -69.73 REMARK 500 15 SER A 91 155.37 -43.67 REMARK 500 16 SER A 33 110.67 -167.42 REMARK 500 16 ASN A 41 95.59 -50.64 REMARK 500 16 PRO A 62 3.46 -69.76 REMARK 500 16 LEU A 82 153.37 -46.10 REMARK 500 16 PRO A 89 -172.07 -69.80 REMARK 500 16 SER A 91 155.90 -40.62 REMARK 500 16 ASP A 93 101.54 -43.09 REMARK 500 16 PRO A 101 -179.18 -69.75 REMARK 500 17 LEU A 11 135.58 -173.71 REMARK 500 17 SER A 15 114.93 -165.08 REMARK 500 17 SER A 33 98.94 -69.41 REMARK 500 17 ASN A 41 38.96 -82.44 REMARK 500 17 PRO A 62 1.58 -69.74 REMARK 500 17 PRO A 89 -171.32 -69.79 REMARK 500 17 SER A 91 155.76 -46.40 REMARK 500 17 ASP A 93 115.64 -38.87 REMARK 500 18 ALA A 8 156.02 -45.46 REMARK 500 18 GLU A 9 41.34 -84.03 REMARK 500 18 LEU A 16 163.94 -46.20 REMARK 500 18 VAL A 19 -72.83 -68.10 REMARK 500 18 LEU A 26 113.74 -161.97 REMARK 500 18 PRO A 38 1.96 -69.83 REMARK 500 18 PRO A 62 3.20 -69.81 REMARK 500 18 SER A 91 156.35 -37.29 REMARK 500 18 ASP A 93 101.20 -43.04 REMARK 500 18 SER A 105 109.64 -49.97 REMARK 500 19 PRO A 38 -178.14 -69.75 REMARK 500 19 PRO A 62 3.03 -69.75 REMARK 500 19 PRO A 89 -174.38 -69.85 REMARK 500 20 LEU A 14 45.24 32.41 REMARK 500 20 LEU A 16 107.38 -58.00 REMARK 500 20 LEU A 26 116.38 -160.77 REMARK 500 20 GLN A 51 -70.49 -40.79 REMARK 500 20 PRO A 62 2.85 -69.68 REMARK 500 20 SER A 91 156.08 -46.61 REMARK 500 20 ASP A 93 109.72 -39.33 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT008000510.1 RELATED DB: TARGETDB
DBREF 1X5A A 8 101 UNP Q60750 EPHA1_MOUSE 446 539
SEQADV 1X5A GLY A 1 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A SER A 2 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A SER A 3 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A GLY A 4 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A SER A 5 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A SER A 6 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A GLY A 7 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A SER A 102 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A GLY A 103 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A PRO A 104 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A SER A 105 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A SER A 106 UNP Q60750 CLONING ARTIFACT SEQADV 1X5A GLY A 107 UNP Q60750 CLONING ARTIFACT
SEQRES 1 A 107 GLY SER SER GLY SER SER GLY ALA GLU SER LEU SER GLY SEQRES 2 A 107 LEU SER LEU LYS LEU VAL LYS LYS GLU PRO ARG GLN LEU SEQRES 3 A 107 GLU LEU THR TRP ALA GLY SER ARG PRO ARG ASN PRO GLY SEQRES 4 A 107 GLY ASN LEU SER TYR GLU LEU HIS VAL LEU ASN GLN ASP SEQRES 5 A 107 GLU GLU TRP HIS GLN MET VAL LEU GLU PRO ARG VAL LEU SEQRES 6 A 107 LEU THR LYS LEU GLN PRO ASP THR THR TYR ILE VAL ARG SEQRES 7 A 107 VAL ARG THR LEU THR PRO LEU GLY PRO GLY PRO PHE SER SEQRES 8 A 107 PRO ASP HIS GLU PHE ARG THR SER PRO PRO SER GLY PRO SEQRES 9 A 107 SER SER GLY
SHEET 1 A 3 LEU A 18 GLU A 22 0 SHEET 2 A 3 GLN A 25 THR A 29 -1 O GLU A 27 N VAL A 19 SHEET 3 A 3 ARG A 63 THR A 67 -1 O LEU A 66 N LEU A 26 SHEET 1 B 4 GLU A 54 VAL A 59 0 SHEET 2 B 4 SER A 43 LEU A 49 -1 N LEU A 46 O GLN A 57 SHEET 3 B 4 THR A 74 LEU A 82 -1 O ARG A 80 N GLU A 45 SHEET 4 B 4 HIS A 94 ARG A 97 -1 O PHE A 96 N TYR A 75
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000