10 20 30 40 50 60 70 80 1X4X - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-MAY-05 1X4X
TITLE SOLUTION STRUCTURE OF THE 6TH FIBRONECTIN TYPE III DOMAIN TITLE 2 FROM HUMAN FIBRONECTIN TYPE III DOMAIN CONTAINING PROTEIN 3
COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRONECTIN TYPE-III DOMAIN CONTAINING PROTEIN COMPND 3 3A; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: FIBRONECTIN TYPE III (FN3) DOMAIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FNDC3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040705-15; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS FIBRONECTIN TYPE III, FN3, IMMUNOGLOBULIN-LIKE BETA- KEYWDS 2 SANDWICH FOLD, KIAA0970, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 3 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 4 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 5 RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1X4X 1 VERSN REVDAT 1 15-NOV-05 1X4X 0
JRNL AUTH T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 6TH FIBRONECTIN TYPE III JRNL TITL 2 DOMAIN FROM HUMAN FIBRONECTIN TYPE III DOMAIN JRNL TITL 3 CONTAINING PROTEIN 3 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1X4X COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024383.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 220MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.66MM FN3 DOMAIN U-15N,13C; REMARK 210 20MM D-TRIS-HCL; 200MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 18 91.94 -49.91 REMARK 500 1 LEU A 32 77.83 -69.62 REMARK 500 2 SER A 5 57.35 -98.78 REMARK 500 2 PRO A 8 -179.28 -69.73 REMARK 500 2 GLN A 10 152.08 -44.13 REMARK 500 2 SER A 20 -177.67 -171.00 REMARK 500 2 PRO A 31 -169.19 -69.85 REMARK 500 2 ASN A 34 50.49 -95.60 REMARK 500 2 ILE A 54 108.41 -59.08 REMARK 500 2 SER A 90 174.55 -59.45 REMARK 500 2 SER A 104 139.92 -39.18 REMARK 500 2 SER A 105 118.20 -168.50 REMARK 500 3 CYS A 18 95.84 -44.79 REMARK 500 3 PRO A 31 -164.60 -69.71 REMARK 500 3 LEU A 32 68.15 -107.36 REMARK 500 3 SER A 62 129.92 -172.24 REMARK 500 3 SER A 90 -177.38 -57.25 REMARK 500 4 PRO A 8 -178.78 -69.76 REMARK 500 4 GLN A 10 157.78 -46.33 REMARK 500 4 CYS A 18 103.38 -55.55 REMARK 500 4 PRO A 31 -170.13 -69.70 REMARK 500 4 SER A 90 178.46 -57.09 REMARK 500 4 PRO A 103 2.76 -69.66 REMARK 500 5 ASN A 34 44.23 -93.98 REMARK 500 5 PRO A 103 91.38 -69.81 REMARK 500 6 SER A 5 -52.57 -125.29 REMARK 500 6 GLN A 10 154.72 -47.82 REMARK 500 6 CYS A 18 100.67 -50.87 REMARK 500 6 PRO A 31 -164.51 -69.84 REMARK 500 6 ASN A 34 83.14 -55.92 REMARK 500 7 SER A 2 41.79 -95.84 REMARK 500 7 PRO A 31 -171.22 -69.74 REMARK 500 7 LEU A 32 49.85 -82.18 REMARK 500 7 SER A 33 104.72 -40.45 REMARK 500 7 VAL A 38 102.31 -56.85 REMARK 500 7 SER A 90 -178.40 -56.73 REMARK 500 7 PRO A 103 94.90 -69.74 REMARK 500 8 SER A 3 115.96 -38.75 REMARK 500 8 PRO A 31 -163.78 -69.73 REMARK 500 8 SER A 33 103.29 -57.91 REMARK 500 8 ASN A 34 37.76 -99.45 REMARK 500 8 PRO A 103 97.39 -69.79 REMARK 500 8 SER A 104 45.46 34.62 REMARK 500 9 SER A 6 32.99 -94.62 REMARK 500 9 PRO A 8 -170.09 -69.78 REMARK 500 9 CYS A 18 89.34 -53.70 REMARK 500 9 PRO A 31 -169.00 -69.77 REMARK 500 9 PRO A 88 -177.31 -69.67 REMARK 500 10 SER A 3 -60.76 -90.96 REMARK 500 10 GLN A 10 157.30 -44.61 REMARK 500 10 SER A 90 169.85 -47.19 REMARK 500 10 VAL A 92 121.15 -35.85 REMARK 500 10 SER A 100 34.77 -94.05 REMARK 500 11 PRO A 8 -179.12 -69.73 REMARK 500 11 GLN A 10 156.16 -45.24 REMARK 500 11 CYS A 18 82.84 -61.41 REMARK 500 11 ILE A 54 106.77 -56.56 REMARK 500 11 SER A 90 178.08 -53.58 REMARK 500 12 CYS A 18 77.52 -65.73 REMARK 500 12 SER A 90 173.09 -56.13 REMARK 500 13 PRO A 8 -179.57 -69.73 REMARK 500 13 GLN A 10 155.68 -43.15 REMARK 500 13 CYS A 18 105.57 -58.87 REMARK 500 13 PRO A 31 -163.69 -69.80 REMARK 500 13 PRO A 59 1.82 -69.70 REMARK 500 13 PRO A 88 -175.76 -69.77 REMARK 500 14 PRO A 8 -175.07 -69.75 REMARK 500 14 CYS A 18 95.77 -59.16 REMARK 500 14 PRO A 31 -173.97 -69.85 REMARK 500 14 ASN A 34 48.32 -103.15 REMARK 500 14 VAL A 92 131.87 -37.00 REMARK 500 15 GLN A 10 150.79 -43.60 REMARK 500 15 CYS A 18 77.67 -69.93 REMARK 500 15 PRO A 31 -169.15 -69.71 REMARK 500 15 PRO A 88 -176.11 -69.77 REMARK 500 15 SER A 90 -177.91 -65.83 REMARK 500 15 VAL A 92 109.68 -45.40 REMARK 500 16 PRO A 8 -179.50 -69.68 REMARK 500 16 CYS A 18 79.75 -68.00 REMARK 500 16 PRO A 31 -167.88 -69.76 REMARK 500 16 ASN A 34 60.28 -104.21 REMARK 500 16 SER A 90 166.82 -48.05 REMARK 500 16 SER A 101 102.04 -37.96 REMARK 500 17 PRO A 8 -176.19 -69.72 REMARK 500 17 GLN A 10 150.17 -48.80 REMARK 500 17 CYS A 18 82.98 -55.25 REMARK 500 17 ASN A 34 53.79 -90.50 REMARK 500 17 SER A 90 -178.71 -51.00 REMARK 500 17 SER A 101 126.31 -34.52 REMARK 500 18 PRO A 31 -165.08 -69.78 REMARK 500 18 LEU A 32 53.00 -99.02 REMARK 500 18 ASN A 34 87.83 -61.29 REMARK 500 18 PRO A 88 -176.71 -69.76 REMARK 500 18 SER A 90 -179.51 -67.44 REMARK 500 18 SER A 104 42.97 -82.27 REMARK 500 19 PRO A 8 -172.95 -69.73 REMARK 500 19 GLN A 10 152.39 -43.17 REMARK 500 19 CYS A 18 100.39 -48.55 REMARK 500 19 PRO A 31 -163.74 -69.75 REMARK 500 19 ASN A 34 -55.42 -122.79 REMARK 500 19 ILE A 54 106.59 -59.24 REMARK 500 19 SER A 90 -174.99 -58.35 REMARK 500 19 SER A 105 -58.81 -124.85 REMARK 500 20 SER A 6 101.46 -59.30 REMARK 500 20 PRO A 8 -169.44 -69.81 REMARK 500 20 CYS A 18 99.70 -49.09 REMARK 500 20 SER A 20 -179.85 -170.85 REMARK 500 20 VAL A 38 107.08 -55.89 REMARK 500 20 SER A 90 173.31 -53.86 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100947.2 RELATED DB: TARGETDB
DBREF 1X4X A 8 100 UNP Q9Y2H6 FNDC3_HUMAN 695 787
SEQADV 1X4X GLY A 1 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 2 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 3 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 4 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 5 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 6 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 7 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 101 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 102 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X PRO A 103 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 104 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X SER A 105 UNP Q9Y2H6 CLONING ARTIFACT SEQADV 1X4X GLY A 106 UNP Q9Y2H6 CLONING ARTIFACT
SEQRES 1 A 106 GLY SER SER GLY SER SER GLY PRO ASP GLN CYS LYS PRO SEQRES 2 A 106 PRO GLN VAL THR CYS ARG SER ALA THR CYS ALA GLN VAL SEQRES 3 A 106 ASN TRP GLU VAL PRO LEU SER ASN GLY THR ASP VAL THR SEQRES 4 A 106 GLU TYR ARG LEU GLU TRP GLY GLY VAL GLU GLY SER MET SEQRES 5 A 106 GLN ILE CYS TYR CYS GLY PRO GLY LEU SER TYR GLU ILE SEQRES 6 A 106 LYS GLY LEU SER PRO ALA THR THR TYR TYR CYS ARG VAL SEQRES 7 A 106 GLN ALA LEU SER VAL VAL GLY ALA GLY PRO PHE SER GLU SEQRES 8 A 106 VAL VAL ALA CYS VAL THR PRO PRO SER SER GLY PRO SER SEQRES 9 A 106 SER GLY
SHEET 1 A 3 THR A 17 SER A 20 0 SHEET 2 A 3 CYS A 23 ASN A 27 -1 O GLN A 25 N THR A 17 SHEET 3 A 3 SER A 62 LYS A 66 -1 O ILE A 65 N ALA A 24 SHEET 1 B 4 ILE A 54 GLY A 58 0 SHEET 2 B 4 GLU A 40 GLY A 46 -1 N LEU A 43 O CYS A 55 SHEET 3 B 4 THR A 73 LEU A 81 -1 O ARG A 77 N GLU A 44 SHEET 4 B 4 VAL A 93 VAL A 96 -1 O CYS A 95 N TYR A 74
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000