10 20 30 40 50 60 70 80 1X4W - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL BINDING PROTEIN 15-MAY-05 1X4W
TITLE SOLUTION STRUCTURE OF THE ZF-AN1 DOMAIN FROM HUMAN TITLE 2 HYPOTHETICAL PROTEIN FLJ13222
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN FLJ13222; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZF-AN1 DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TEX27; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041206-01; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS ZF-AN1 DOMAIN, ZINC BINDING, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, METAL BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1X4W 1 VERSN REVDAT 1 15-NOV-05 1X4W 0
JRNL AUTH T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE ZF-AN1 DOMAIN FROM HUMAN JRNL TITL 2 HYPOTHETICAL PROTEIN FLJ13222 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1X4W COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024382.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.66MM ZF-AN1 DOMAIN U-15N, REMARK 210 13C; 20MM D-TRIS-HCL; 100MM REMARK 210 NACL; 1MM D-DTT; 0.05MM EDTA- REMARK 210 2ZN; 0.02% NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 85.31 -64.98 REMARK 500 1 CYS A 18 165.11 -45.36 REMARK 500 1 GLN A 30 -35.68 -35.15 REMARK 500 1 SER A 34 150.38 -34.22 REMARK 500 1 ASP A 52 46.17 33.65 REMARK 500 1 CYS A 53 139.26 -36.50 REMARK 500 2 GLN A 30 -38.00 -33.51 REMARK 500 2 SER A 34 152.11 -35.29 REMARK 500 2 ASP A 52 42.01 35.74 REMARK 500 2 CYS A 53 141.14 -35.63 REMARK 500 2 PHE A 55 171.88 -54.59 REMARK 500 2 MET A 58 84.06 -67.47 REMARK 500 2 PRO A 64 4.22 -69.77 REMARK 500 3 SER A 2 85.24 -63.17 REMARK 500 3 SER A 3 106.10 -57.96 REMARK 500 3 SER A 6 136.14 -170.53 REMARK 500 3 GLN A 12 109.63 -56.03 REMARK 500 3 GLN A 22 46.05 39.46 REMARK 500 3 GLN A 30 -37.99 -33.26 REMARK 500 3 SER A 34 148.94 -39.26 REMARK 500 3 ASP A 52 44.59 34.43 REMARK 500 3 CYS A 53 143.85 -34.35 REMARK 500 3 PHE A 55 172.81 -59.73 REMARK 500 4 ARG A 9 53.53 -90.82 REMARK 500 4 CYS A 18 166.11 -42.69 REMARK 500 4 GLU A 26 150.72 -49.68 REMARK 500 4 GLN A 30 -32.33 -35.10 REMARK 500 4 SER A 34 151.55 -35.66 REMARK 500 4 ASP A 52 46.51 35.85 REMARK 500 4 CYS A 53 143.33 -37.74 REMARK 500 4 PRO A 64 5.11 -69.77 REMARK 500 4 SER A 65 39.26 74.63 REMARK 500 5 SER A 8 104.55 -44.43 REMARK 500 5 CYS A 18 166.03 -46.29 REMARK 500 5 GLN A 30 -34.69 -34.28 REMARK 500 5 SER A 34 154.45 -41.06 REMARK 500 5 ASP A 52 46.91 34.66 REMARK 500 5 CYS A 53 138.87 -37.87 REMARK 500 5 SER A 66 -44.76 -131.01 REMARK 500 6 ARG A 9 48.69 -93.51 REMARK 500 6 GLN A 12 83.43 -67.37 REMARK 500 6 ARG A 15 -37.42 -39.48 REMARK 500 6 GLN A 30 -35.57 -33.71 REMARK 500 6 SER A 34 151.23 -34.85 REMARK 500 6 ASP A 52 45.60 34.15 REMARK 500 6 CYS A 53 142.04 -36.01 REMARK 500 6 HIS A 57 41.09 -91.57 REMARK 500 6 ARG A 60 106.76 -165.44 REMARK 500 6 SER A 65 42.29 -107.07 REMARK 500 7 SER A 6 -58.62 -122.18 REMARK 500 7 GLN A 12 97.82 -52.52 REMARK 500 7 SER A 14 112.45 -168.52 REMARK 500 7 GLN A 30 -35.43 -33.27 REMARK 500 7 SER A 34 153.30 -36.40 REMARK 500 7 ASP A 52 45.86 34.19 REMARK 500 7 CYS A 53 143.45 -36.34 REMARK 500 7 PHE A 55 179.54 -59.02 REMARK 500 8 SER A 3 42.20 -84.05 REMARK 500 8 ARG A 9 -52.06 -128.95 REMARK 500 8 ARG A 16 -37.04 -39.12 REMARK 500 8 GLN A 30 -39.75 -33.90 REMARK 500 8 SER A 34 150.31 -34.19 REMARK 500 8 ASP A 52 45.54 32.95 REMARK 500 8 CYS A 53 140.81 -36.77 REMARK 500 9 CYS A 18 165.38 -47.54 REMARK 500 9 GLN A 30 -37.41 -34.47 REMARK 500 9 SER A 34 148.61 -36.23 REMARK 500 9 ASP A 52 45.40 34.04 REMARK 500 9 CYS A 53 141.18 -37.00 REMARK 500 9 PRO A 64 93.95 -69.81 REMARK 500 10 SER A 5 98.29 -64.08 REMARK 500 10 ARG A 9 41.42 72.76 REMARK 500 10 CYS A 18 165.88 -48.60 REMARK 500 10 GLN A 30 -37.19 -33.36 REMARK 500 10 SER A 34 152.12 -35.16 REMARK 500 10 CYS A 42 -176.42 -54.99 REMARK 500 10 ASP A 52 44.95 34.25 REMARK 500 10 CYS A 53 141.67 -36.38 REMARK 500 11 ARG A 9 41.72 -89.39 REMARK 500 11 ARG A 15 42.12 -81.85 REMARK 500 11 CYS A 18 164.16 -41.59 REMARK 500 11 SER A 34 151.40 -36.64 REMARK 500 11 ASP A 52 43.06 34.71 REMARK 500 11 CYS A 53 143.33 -34.54 REMARK 500 11 PHE A 55 174.83 -58.88 REMARK 500 11 HIS A 57 92.49 -59.28 REMARK 500 11 ARG A 60 149.52 -173.83 REMARK 500 12 SER A 6 145.62 -39.04 REMARK 500 12 SER A 8 -39.74 -34.82 REMARK 500 12 GLN A 12 45.67 74.58 REMARK 500 12 CYS A 18 165.83 -48.18 REMARK 500 12 GLN A 30 -38.46 -31.10 REMARK 500 12 SER A 34 151.33 -38.91 REMARK 500 12 ASP A 52 47.14 34.67 REMARK 500 12 CYS A 53 140.33 -37.79 REMARK 500 12 SER A 65 42.51 -105.46 REMARK 500 13 ARG A 15 46.52 -89.14 REMARK 500 13 CYS A 18 164.92 -43.89 REMARK 500 13 GLN A 22 50.39 38.13 REMARK 500 13 GLN A 30 -33.89 -34.22 REMARK 500 13 SER A 34 151.00 -34.74 REMARK 500 13 ASP A 52 46.19 33.82 REMARK 500 13 CYS A 53 142.30 -36.90 REMARK 500 13 ASP A 56 49.01 -81.82 REMARK 500 13 PRO A 64 5.67 -69.79 REMARK 500 13 SER A 65 113.42 -32.21 REMARK 500 14 SER A 6 -61.12 -95.84 REMARK 500 14 LYS A 13 -38.04 -38.82 REMARK 500 14 SER A 14 110.09 -160.88 REMARK 500 14 CYS A 18 163.98 -48.10 REMARK 500 14 LEU A 27 -38.33 -35.43 REMARK 500 14 SER A 34 154.87 -37.57 REMARK 500 14 ASP A 52 47.78 34.71 REMARK 500 14 CYS A 53 141.11 -39.37 REMARK 500 14 MET A 58 108.81 -44.30 REMARK 500 15 CYS A 18 164.81 -41.70 REMARK 500 15 GLN A 30 -38.73 -32.44 REMARK 500 15 SER A 34 150.79 -37.13 REMARK 500 15 ASP A 52 46.70 33.41 REMARK 500 15 CYS A 53 141.21 -37.57 REMARK 500 15 SER A 62 132.37 -174.06 REMARK 500 16 SER A 6 43.02 -108.86 REMARK 500 16 ARG A 15 45.99 -79.11 REMARK 500 16 CYS A 18 164.26 -46.85 REMARK 500 16 GLN A 30 -36.70 -32.74 REMARK 500 16 SER A 34 145.17 -33.80 REMARK 500 16 ASP A 52 45.93 34.13 REMARK 500 16 CYS A 53 141.32 -35.77 REMARK 500 16 PHE A 55 167.49 -49.90 REMARK 500 16 PRO A 64 87.87 -69.78 REMARK 500 17 ARG A 16 -35.55 -32.80 REMARK 500 17 CYS A 18 165.92 -44.10 REMARK 500 17 GLN A 30 -34.85 -33.93 REMARK 500 17 SER A 34 151.82 -36.61 REMARK 500 17 ASP A 52 45.86 33.53 REMARK 500 17 CYS A 53 136.94 -35.93 REMARK 500 17 ARG A 60 103.56 -56.08 REMARK 500 17 PRO A 64 88.65 -69.72 REMARK 500 18 ARG A 15 39.33 -84.46 REMARK 500 18 CYS A 18 166.18 -42.68 REMARK 500 18 GLN A 30 -34.62 -33.39 REMARK 500 18 SER A 34 149.14 -37.27 REMARK 500 18 ASP A 52 45.32 33.55 REMARK 500 18 CYS A 53 141.00 -36.43 REMARK 500 19 GLN A 12 43.40 74.00 REMARK 500 19 ARG A 15 39.26 -83.09 REMARK 500 19 CYS A 18 166.38 -42.82 REMARK 500 19 GLN A 30 -32.73 -34.60 REMARK 500 19 SER A 34 151.69 -42.27 REMARK 500 19 ASP A 52 46.78 34.45 REMARK 500 19 CYS A 53 140.62 -38.22 REMARK 500 19 PHE A 55 173.08 -58.94 REMARK 500 19 ARG A 60 45.62 35.11 REMARK 500 19 PRO A 64 0.01 -69.77 REMARK 500 20 LYS A 11 -65.19 -99.93 REMARK 500 20 GLN A 30 -37.10 -31.74 REMARK 500 20 SER A 34 156.01 -38.00 REMARK 500 20 CYS A 42 -176.84 -54.50 REMARK 500 20 ARG A 46 -36.80 -39.66 REMARK 500 20 ASP A 52 43.71 34.39 REMARK 500 20 CYS A 53 142.86 -34.39 REMARK 500 20 PHE A 55 154.01 -48.66 REMARK 500 20 MET A 58 157.73 -41.28 REMARK 500 20 PRO A 64 90.33 -69.77 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 CYS A 21 SG 97.6 REMARK 620 3 CYS A 42 SG 118.4 102.3 REMARK 620 4 HIS A 45 ND1 116.2 118.5 103.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 35 SG REMARK 620 2 CYS A 37 SG 110.2 REMARK 620 3 HIS A 51 NE2 102.5 116.5 REMARK 620 4 CYS A 53 SG 116.7 111.6 98.9 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002022137.1 RELATED DB: TARGETDB
DBREF 1X4W A 8 61 UNP Q9H8U3 ZFAN3_HUMAN 147 200
SEQADV 1X4W GLY A 1 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W SER A 2 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W SER A 3 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W GLY A 4 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W SER A 5 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W SER A 6 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W GLY A 7 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W SER A 62 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W GLY A 63 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W PRO A 64 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W SER A 65 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W SER A 66 UNP Q9H8U3 CLONING ARTIFACT SEQADV 1X4W GLY A 67 UNP Q9H8U3 CLONING ARTIFACT
SEQRES 1 A 67 GLY SER SER GLY SER SER GLY SER ARG SER LYS GLN LYS SEQRES 2 A 67 SER ARG ARG ARG CYS PHE GLN CYS GLN THR LYS LEU GLU SEQRES 3 A 67 LEU VAL GLN GLN GLU LEU GLY SER CYS ARG CYS GLY TYR SEQRES 4 A 67 VAL PHE CYS MET LEU HIS ARG LEU PRO GLU GLN HIS ASP SEQRES 5 A 67 CYS THR PHE ASP HIS MET GLY ARG GLY SER GLY PRO SER SEQRES 6 A 67 SER GLY
HET ZN A 201 1 HET ZN A 401 1
HETNAM ZN ZINC ION
FORMUL 2 ZN 2(ZN 2+)
HELIX 1 1 GLU A 26 SER A 34 1 9
LINK ZN ZN A 201 SG CYS A 18 1555 1555 2.33 LINK ZN ZN A 201 SG CYS A 21 1555 1555 2.33 LINK ZN ZN A 201 SG CYS A 42 1555 1555 2.33 LINK ZN ZN A 201 ND1 HIS A 45 1555 1555 2.33 LINK ZN ZN A 401 SG CYS A 35 1555 1555 2.37 LINK ZN ZN A 401 SG CYS A 37 1555 1555 2.36 LINK ZN ZN A 401 NE2 HIS A 51 1555 1555 2.33 LINK ZN ZN A 401 SG CYS A 53 1555 1555 2.33
SITE 1 AC1 4 CYS A 18 CYS A 21 CYS A 42 HIS A 45 SITE 1 AC2 4 CYS A 35 CYS A 37 HIS A 51 CYS A 53
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000