10 20 30 40 50 60 70 80 1X4G - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 14-MAY-05 1X4G
TITLE SOLUTION STRUCTURE OF RRM DOMAIN IN NUCLEOLYSIN TIAR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOLYSIN TIAR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM DOMAIN; COMPND 5 SYNONYM: TIA-1 RELATED PROTEIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TIAL1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050125-01; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS NMR, STRUCTURAL GENOMICS, RRM DOMAIN, TIA-1 RELATED PROTEIN, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, RNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1X4G 1 VERSN REVDAT 1 14-NOV-05 1X4G 0
JRNL AUTH F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RRM DOMAIN IN NUCLEOLYSIN JRNL TITL 2 TIAR JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.29 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1X4G COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024366.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8MM U-15,13C; 20MM REMARK 210 PHOSPHATE BUFFER NA; 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.863, CYANA 2.0.29 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 6 42.33 -166.66 REMARK 500 1 THR A 9 96.64 62.02 REMARK 500 1 GLN A 11 -167.99 44.43 REMARK 500 1 ASN A 19 -32.58 -176.56 REMARK 500 1 ALA A 34 -46.64 -139.03 REMARK 500 1 MET A 53 -60.33 -98.67 REMARK 500 1 SER A 80 -70.61 -84.37 REMARK 500 1 ASN A 82 84.59 -61.91 REMARK 500 1 THR A 103 -57.57 -159.22 REMARK 500 1 SER A 104 114.96 59.12 REMARK 500 2 SER A 2 -53.79 -168.68 REMARK 500 2 SER A 3 151.12 178.90 REMARK 500 2 ASN A 8 103.81 57.01 REMARK 500 2 LYS A 10 86.62 46.79 REMARK 500 2 ALA A 34 -40.91 -134.42 REMARK 500 2 SER A 80 -72.48 -88.21 REMARK 500 2 ASN A 82 92.53 -62.83 REMARK 500 2 ASP A 101 70.62 -172.17 REMARK 500 2 PRO A 106 0.67 -69.78 REMARK 500 2 SER A 107 94.88 -40.18 REMARK 500 2 SER A 108 -63.03 -177.23 REMARK 500 3 ASN A 8 -53.50 -156.05 REMARK 500 3 VAL A 18 46.77 -77.45 REMARK 500 3 ASN A 19 -36.96 -168.33 REMARK 500 3 SER A 22 151.15 -34.95 REMARK 500 3 ALA A 34 -39.16 -140.83 REMARK 500 3 SER A 80 -71.09 -89.76 REMARK 500 3 ASN A 82 91.95 -58.10 REMARK 500 3 LYS A 97 104.25 -166.39 REMARK 500 3 GLU A 98 54.94 -108.98 REMARK 500 3 ASP A 101 150.29 65.19 REMARK 500 3 MET A 102 -57.77 -146.58 REMARK 500 3 THR A 103 94.67 44.45 REMARK 500 3 SER A 104 159.09 61.09 REMARK 500 3 SER A 107 -56.16 -169.40 REMARK 500 4 SER A 2 -57.44 -148.36 REMARK 500 4 SER A 3 168.51 179.37 REMARK 500 4 ALA A 34 -40.81 -146.44 REMARK 500 4 SER A 80 -70.12 -89.83 REMARK 500 4 GLU A 98 -71.27 -91.45 REMARK 500 4 SER A 99 82.01 81.51 REMARK 500 4 PRO A 100 2.67 -69.79 REMARK 500 4 MET A 102 87.68 -157.13 REMARK 500 4 THR A 103 170.33 -56.91 REMARK 500 4 SER A 107 153.19 68.14 REMARK 500 5 SER A 2 150.39 177.72 REMARK 500 5 LYS A 10 109.31 -177.26 REMARK 500 5 ALA A 34 -47.99 -131.00 REMARK 500 5 SER A 80 -71.45 -86.64 REMARK 500 5 ASN A 82 96.51 -46.63 REMARK 500 5 GLU A 98 -59.79 -151.21 REMARK 500 5 SER A 108 -45.30 -153.42 REMARK 500 6 SER A 5 144.74 -170.14 REMARK 500 6 SER A 6 138.01 178.38 REMARK 500 6 LYS A 10 125.64 61.62 REMARK 500 6 ASN A 19 -27.42 175.02 REMARK 500 6 SER A 22 144.42 59.39 REMARK 500 6 ALA A 34 -41.32 -136.77 REMARK 500 6 SER A 80 -70.67 -85.69 REMARK 500 6 ASP A 101 -53.10 -172.71 REMARK 500 6 MET A 102 84.91 59.22 REMARK 500 7 SER A 5 91.81 39.70 REMARK 500 7 LYS A 10 -178.27 58.00 REMARK 500 7 GLN A 11 -173.07 46.21 REMARK 500 7 VAL A 18 39.52 -82.86 REMARK 500 7 ASN A 19 -34.96 -164.46 REMARK 500 7 ALA A 34 -39.05 -136.07 REMARK 500 7 PHE A 49 -29.73 -39.48 REMARK 500 7 HIS A 71 -33.53 -39.93 REMARK 500 7 LYS A 97 85.09 -158.09 REMARK 500 7 SER A 99 76.80 37.14 REMARK 500 7 ASP A 101 106.33 -43.37 REMARK 500 7 SER A 108 -60.39 -167.74 REMARK 500 8 SER A 3 43.26 -140.78 REMARK 500 8 SER A 6 -45.12 -130.03 REMARK 500 8 ASN A 8 -48.33 -135.42 REMARK 500 8 LYS A 10 -44.29 -175.60 REMARK 500 8 ASN A 19 -34.28 -173.30 REMARK 500 8 ALA A 34 -44.76 -136.09 REMARK 500 8 ASN A 82 81.89 -68.46 REMARK 500 8 LYS A 97 116.13 68.13 REMARK 500 8 SER A 99 141.29 176.75 REMARK 500 8 MET A 102 168.98 54.73 REMARK 500 8 THR A 103 -174.35 50.71 REMARK 500 8 SER A 104 90.90 50.74 REMARK 500 9 SER A 2 86.87 50.88 REMARK 500 9 SER A 5 172.49 52.86 REMARK 500 9 ASN A 8 165.03 60.47 REMARK 500 9 GLN A 11 168.44 59.22 REMARK 500 9 ALA A 34 -39.12 -145.69 REMARK 500 9 SER A 80 -70.88 -87.14 REMARK 500 9 ASN A 82 92.22 -52.56 REMARK 500 9 GLU A 98 122.07 76.85 REMARK 500 9 SER A 104 -59.97 80.55 REMARK 500 9 SER A 107 76.35 58.34 REMARK 500 9 SER A 108 110.81 -166.15 REMARK 500 10 SER A 3 148.48 70.22 REMARK 500 10 VAL A 18 48.50 -80.36 REMARK 500 10 ASN A 19 -34.11 -173.70 REMARK 500 10 ALA A 34 -36.25 -132.73 REMARK 500 10 MET A 53 -60.26 -97.11 REMARK 500 10 ASN A 82 95.20 -63.29 REMARK 500 10 SER A 99 142.35 59.85 REMARK 500 10 THR A 103 81.66 60.57 REMARK 500 11 SER A 6 -57.54 -133.40 REMARK 500 11 LYS A 10 119.82 -160.26 REMARK 500 11 VAL A 18 38.79 -87.02 REMARK 500 11 ASN A 19 -34.77 -165.52 REMARK 500 11 ALA A 34 -41.57 -135.65 REMARK 500 11 HIS A 71 -37.94 -37.07 REMARK 500 11 GLU A 72 -72.04 -52.18 REMARK 500 11 VAL A 79 -33.53 -38.79 REMARK 500 11 SER A 80 -71.15 -91.06 REMARK 500 11 ASN A 82 88.97 -49.53 REMARK 500 11 GLU A 98 31.35 70.59 REMARK 500 11 SER A 108 -53.76 -172.74 REMARK 500 12 SER A 3 69.42 -171.16 REMARK 500 12 SER A 5 -177.17 174.13 REMARK 500 12 SER A 6 143.80 62.86 REMARK 500 12 THR A 9 108.64 -160.48 REMARK 500 12 LYS A 10 -48.17 -159.66 REMARK 500 12 ASN A 19 28.42 -176.13 REMARK 500 12 SER A 22 147.34 60.15 REMARK 500 12 ALA A 34 -38.40 -149.02 REMARK 500 12 ASP A 39 -33.29 -38.63 REMARK 500 12 SER A 80 -70.59 -85.93 REMARK 500 12 ASN A 82 87.41 -68.53 REMARK 500 12 LYS A 97 88.71 59.40 REMARK 500 12 SER A 108 -44.76 -145.82 REMARK 500 13 SER A 5 93.80 60.96 REMARK 500 13 LYS A 10 99.09 57.93 REMARK 500 13 SER A 22 155.25 -49.64 REMARK 500 13 ALA A 34 -44.49 -136.60 REMARK 500 13 PHE A 49 -28.57 -39.78 REMARK 500 13 SER A 80 -70.27 -85.43 REMARK 500 13 ASN A 82 98.05 -56.82 REMARK 500 13 LYS A 97 94.91 62.65 REMARK 500 13 SER A 99 89.47 -179.01 REMARK 500 14 SER A 2 -47.68 -179.02 REMARK 500 14 SER A 3 142.75 65.82 REMARK 500 14 SER A 6 -40.68 -143.93 REMARK 500 14 ASN A 8 150.29 66.93 REMARK 500 14 THR A 9 82.97 -156.48 REMARK 500 14 LYS A 10 134.79 177.93 REMARK 500 14 GLN A 20 -31.09 -39.22 REMARK 500 14 ALA A 34 -39.35 -147.60 REMARK 500 14 PHE A 49 -19.51 -48.02 REMARK 500 14 SER A 80 -72.21 -89.20 REMARK 500 14 ASN A 82 90.61 -64.31 REMARK 500 14 LYS A 97 82.95 63.84 REMARK 500 14 SER A 99 82.84 64.31 REMARK 500 14 MET A 102 87.22 -160.19 REMARK 500 15 SER A 3 -50.50 -122.98 REMARK 500 15 ASN A 8 24.08 -144.80 REMARK 500 15 VAL A 18 41.84 -81.99 REMARK 500 15 ASN A 19 -35.86 -160.40 REMARK 500 15 ALA A 34 -40.62 -144.49 REMARK 500 15 ASN A 82 92.55 -64.89 REMARK 500 15 LYS A 97 -73.42 -156.48 REMARK 500 15 SER A 108 169.66 70.97 REMARK 500 16 SER A 5 154.35 -48.39 REMARK 500 16 LYS A 10 97.14 46.51 REMARK 500 16 VAL A 18 39.07 -87.35 REMARK 500 16 ASN A 19 -36.51 -155.63 REMARK 500 16 ALA A 34 -41.53 -139.23 REMARK 500 16 SER A 80 -70.51 -87.52 REMARK 500 16 VAL A 81 -18.58 -49.11 REMARK 500 16 ASP A 101 100.34 -40.48 REMARK 500 16 SER A 107 -58.50 -155.61 REMARK 500 17 SER A 2 -67.80 -123.12 REMARK 500 17 SER A 3 146.71 -173.52 REMARK 500 17 SER A 5 142.31 179.78 REMARK 500 17 LYS A 10 100.46 -163.21 REMARK 500 17 VAL A 18 32.46 -84.35 REMARK 500 17 ASN A 19 -37.16 -146.21 REMARK 500 17 ALA A 34 -40.10 -142.21 REMARK 500 17 GLU A 72 -72.93 -50.89 REMARK 500 17 SER A 80 -69.43 -93.00 REMARK 500 17 ASN A 82 89.23 -56.79 REMARK 500 17 LYS A 97 38.63 34.68 REMARK 500 17 SER A 99 81.44 53.38 REMARK 500 17 THR A 103 -48.83 -135.64 REMARK 500 17 SER A 104 113.05 56.98 REMARK 500 17 SER A 107 -44.67 -133.02 REMARK 500 18 SER A 2 175.83 56.59 REMARK 500 18 THR A 9 -53.18 -152.60 REMARK 500 18 LYS A 10 -51.39 -136.33 REMARK 500 18 GLN A 11 176.97 72.50 REMARK 500 18 VAL A 18 37.45 -85.69 REMARK 500 18 ASN A 19 -36.26 -157.55 REMARK 500 18 ALA A 34 -38.93 -150.96 REMARK 500 18 PHE A 49 -19.96 -49.32 REMARK 500 18 ASN A 82 96.01 -61.00 REMARK 500 18 SER A 99 143.51 -34.53 REMARK 500 18 SER A 108 158.93 71.13 REMARK 500 19 SER A 2 114.69 -170.87 REMARK 500 19 SER A 3 154.38 59.47 REMARK 500 19 SER A 6 159.17 68.84 REMARK 500 19 LYS A 10 86.13 -171.08 REMARK 500 19 ASN A 19 -33.71 -174.27 REMARK 500 19 ALA A 34 -49.44 -140.93 REMARK 500 19 PHE A 49 -30.07 -39.45 REMARK 500 19 SER A 80 -70.75 -88.92 REMARK 500 19 ASN A 82 90.93 -45.23 REMARK 500 19 LYS A 97 143.01 -171.75 REMARK 500 19 GLU A 98 -53.65 -122.48 REMARK 500 19 SER A 107 115.62 -170.73 REMARK 500 20 SER A 2 171.42 57.54 REMARK 500 20 SER A 5 104.84 -173.77 REMARK 500 20 ASN A 8 80.52 -156.42 REMARK 500 20 LYS A 10 104.09 -171.78 REMARK 500 20 VAL A 18 43.51 -79.93 REMARK 500 20 ASN A 19 -31.20 -177.16 REMARK 500 20 SER A 21 -81.15 -87.63 REMARK 500 20 SER A 22 144.15 -170.89 REMARK 500 20 ALA A 34 -40.49 -136.23 REMARK 500 20 SER A 80 -72.55 -91.99 REMARK 500 20 ASN A 82 92.48 -60.38 REMARK 500 20 ASP A 101 131.12 169.64 REMARK 500 20 MET A 102 42.98 -177.54 REMARK 500 20 SER A 104 137.71 -176.75 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002000434.2 RELATED DB: TARGETDB
DBREF 1X4G A 8 103 UNP Q01085 TIAR_HUMAN 187 282
SEQADV 1X4G GLY A 1 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G SER A 2 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G SER A 3 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G GLY A 4 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G SER A 5 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G SER A 6 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G GLY A 7 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G SER A 104 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G GLY A 105 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G PRO A 106 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G SER A 107 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G SER A 108 UNP Q01085 CLONING ARTIFACT SEQADV 1X4G GLY A 109 UNP Q01085 CLONING ARTIFACT
SEQRES 1 A 109 GLY SER SER GLY SER SER GLY ASN THR LYS GLN LEU ARG SEQRES 2 A 109 PHE GLU ASP VAL VAL ASN GLN SER SER PRO LYS ASN CYS SEQRES 3 A 109 THR VAL TYR CYS GLY GLY ILE ALA SER GLY LEU THR ASP SEQRES 4 A 109 GLN LEU MET ARG GLN THR PHE SER PRO PHE GLY GLN ILE SEQRES 5 A 109 MET GLU ILE ARG VAL PHE PRO GLU LYS GLY TYR SER PHE SEQRES 6 A 109 VAL ARG PHE SER THR HIS GLU SER ALA ALA HIS ALA ILE SEQRES 7 A 109 VAL SER VAL ASN GLY THR THR ILE GLU GLY HIS VAL VAL SEQRES 8 A 109 LYS CYS TYR TRP GLY LYS GLU SER PRO ASP MET THR SER SEQRES 9 A 109 GLY PRO SER SER GLY
HELIX 1 1 PHE A 14 GLN A 20 1 7 HELIX 2 2 ASP A 39 PHE A 46 1 8 HELIX 3 3 SER A 47 PHE A 49 1 3 HELIX 4 4 HIS A 71 VAL A 81 1 11
SHEET 1 A 4 THR A 27 GLY A 31 0 SHEET 2 A 4 ILE A 52 PHE A 58 -1 SHEET 3 A 4 TYR A 63 PHE A 68 -1 SHEET 4 A 4 THR A 85 ILE A 86 -1 SHEET 1 B 2 HIS A 89 VAL A 90 0 SHEET 2 B 2 LYS A 92 TYR A 94 -1
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000