10 20 30 40 50 60 70 80 1X3U - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 10-MAY-05 1X3U
TITLE SOLUTION STRUCTURE OF THE C-TERMINAL TRANSCRIPTIONAL TITLE 2 ACTIVATOR DOMAIN OF FIXJ FROM SINORHIZOBIUM MELILOT
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI; SOURCE 3 ORGANISM_TAXID: 382; SOURCE 4 GENE: FIXJ; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS HELIX-TURN-HELIX, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.KURASHIMA-ITO,Y.KASAI,K.HOSONO,K.TAMURA,S.OUE,M.ISOGAI, AUTHOR 2 Y.ITO,H.NAKAMURA,Y.SHIRO
REVDAT 2 24-FEB-09 1X3U 1 VERSN REVDAT 1 02-MAY-06 1X3U 0
JRNL AUTH K.KURASHIMA-ITO,Y.KASAI,K.HOSONO,K.TAMURA,S.OUE, JRNL AUTH 2 M.ISOGAI,Y.ITO,H.NAKAMURA,Y.SHIRO JRNL TITL SOLUTION STRUCTURE OF THE C-TERMINAL JRNL TITL 2 TRANSCRIPTIONAL ACTIVATOR DOMAIN OF FIXJ FROM JRNL TITL 3 SINORHIZOBIUM MELILOTI AND ITS RECOGNITION OF THE JRNL TITL 4 FIXK PROMOTER JRNL REF BIOCHEMISTRY V. 44 14835 2005 JRNL REFN ISSN 0006-2960 JRNL PMID 16274231 JRNL DOI 10.1021/BI0509043
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1X3U COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024344.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : 1MM FIXJC U-15N,13C; 20MM REMARK 210 NAHPO4-NAH2PO4 (PH 5.5), 100MM REMARK 210 NACL, 50MM NA2SO4; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, AZARA 2.7, ANSIG REMARK 210 3.3, CNS 1.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 129 176.17 51.16 REMARK 500 1 ASP A 130 120.81 163.40 REMARK 500 1 ASP A 131 179.64 49.14 REMARK 500 1 ALA A 132 -64.31 -96.91 REMARK 500 1 LEU A 142 -84.18 -57.01 REMARK 500 1 SER A 143 167.06 171.62 REMARK 500 1 GLN A 148 -73.04 -77.89 REMARK 500 1 ASP A 167 56.66 37.17 REMARK 500 1 LYS A 185 17.06 83.66 REMARK 500 1 ALA A 186 -158.35 -74.73 REMARK 500 1 LYS A 187 -44.69 -154.42 REMARK 500 1 LEU A 192 -75.96 -47.24 REMARK 500 1 PHE A 201 51.76 -96.08 REMARK 500 2 SER A 127 98.75 64.37 REMARK 500 2 HIS A 128 110.50 62.25 REMARK 500 2 ASP A 130 111.69 145.71 REMARK 500 2 ASP A 131 -173.41 44.68 REMARK 500 2 ALA A 132 -65.33 -105.95 REMARK 500 2 LEU A 142 -82.94 -63.46 REMARK 500 2 SER A 143 171.41 172.38 REMARK 500 2 ARG A 177 -71.19 -57.82 REMARK 500 2 SER A 188 -175.18 -171.94 REMARK 500 2 PHE A 201 -74.05 -40.49 REMARK 500 3 HIS A 128 108.15 175.18 REMARK 500 3 MET A 129 94.03 44.33 REMARK 500 3 ASP A 130 -113.09 -128.38 REMARK 500 3 LEU A 142 -85.95 -62.90 REMARK 500 3 SER A 143 168.88 168.35 REMARK 500 3 GLN A 148 -71.72 -81.01 REMARK 500 3 LYS A 185 27.95 85.29 REMARK 500 3 ALA A 186 -162.01 -79.34 REMARK 500 3 LYS A 187 -44.79 -138.55 REMARK 500 4 SER A 127 28.65 -157.12 REMARK 500 4 ASP A 130 -87.99 -98.01 REMARK 500 4 ASP A 131 -163.82 -102.25 REMARK 500 4 LEU A 142 -84.40 -57.32 REMARK 500 4 SER A 143 169.28 172.16 REMARK 500 4 GLN A 148 -71.78 -64.02 REMARK 500 4 HIS A 176 -72.43 -59.74 REMARK 500 4 ARG A 177 -34.15 -36.96 REMARK 500 4 LYS A 185 32.57 78.35 REMARK 500 4 ALA A 186 -160.67 -67.62 REMARK 500 4 LYS A 187 -45.59 -132.55 REMARK 500 4 PHE A 201 51.48 -97.89 REMARK 500 5 SER A 127 74.26 -105.11 REMARK 500 5 ASP A 130 89.74 52.48 REMARK 500 5 ASP A 131 -161.46 36.70 REMARK 500 5 LEU A 142 -81.46 -59.69 REMARK 500 5 LEU A 166 40.40 -109.59 REMARK 500 5 LYS A 185 34.70 82.96 REMARK 500 5 PHE A 201 53.40 -100.31 REMARK 500 6 MET A 129 98.21 68.89 REMARK 500 6 ASP A 130 -85.90 -116.24 REMARK 500 6 ALA A 132 -72.28 -48.14 REMARK 500 6 LEU A 142 -76.99 -88.74 REMARK 500 6 SER A 143 -174.29 169.80 REMARK 500 6 ALA A 186 -160.51 -73.75 REMARK 500 6 LYS A 187 -47.52 -131.80 REMARK 500 7 SER A 127 -79.62 -150.33 REMARK 500 7 HIS A 128 86.63 70.96 REMARK 500 7 MET A 129 111.92 69.97 REMARK 500 7 ASP A 130 -151.24 -135.83 REMARK 500 7 ASP A 131 165.20 -46.39 REMARK 500 7 SER A 143 -164.73 168.35 REMARK 500 7 ASN A 159 -30.85 -39.23 REMARK 500 7 VAL A 180 -70.54 -63.43 REMARK 500 7 LYS A 185 28.61 80.34 REMARK 500 7 ALA A 186 -161.51 -70.81 REMARK 500 7 LYS A 187 -42.71 -137.73 REMARK 500 7 LEU A 192 -73.51 -48.02 REMARK 500 8 SER A 127 170.39 -58.21 REMARK 500 8 HIS A 128 120.06 178.36 REMARK 500 8 MET A 129 75.05 44.18 REMARK 500 8 ASP A 130 -107.80 -127.30 REMARK 500 8 ASP A 131 -168.65 -76.04 REMARK 500 8 LEU A 142 -81.41 -59.43 REMARK 500 8 SER A 143 163.00 173.06 REMARK 500 8 ASP A 167 57.84 37.74 REMARK 500 8 ARG A 177 -71.08 -56.19 REMARK 500 8 VAL A 180 -72.18 -51.71 REMARK 500 8 LYS A 185 29.16 81.80 REMARK 500 8 LYS A 187 -43.85 -133.23 REMARK 500 8 PHE A 201 53.38 -99.35 REMARK 500 9 SER A 127 78.25 57.25 REMARK 500 9 MET A 129 119.90 61.37 REMARK 500 9 ASP A 130 -151.26 -132.01 REMARK 500 9 LEU A 142 -72.08 -64.31 REMARK 500 9 SER A 143 165.78 163.36 REMARK 500 9 LYS A 160 -64.56 -90.63 REMARK 500 9 ASP A 167 55.40 39.08 REMARK 500 9 VAL A 180 -70.28 -54.47 REMARK 500 9 LYS A 185 15.45 81.41 REMARK 500 9 ALA A 186 -161.76 -78.23 REMARK 500 9 LYS A 187 -43.32 -145.76 REMARK 500 9 PHE A 201 31.50 -95.83 REMARK 500 10 HIS A 128 123.84 65.13 REMARK 500 10 MET A 129 85.41 60.74 REMARK 500 10 ASP A 130 -105.49 -119.14 REMARK 500 10 LEU A 142 -83.91 -60.15 REMARK 500 10 SER A 143 165.69 171.66 REMARK 500 10 GLN A 148 -73.45 -81.39 REMARK 500 10 PRO A 158 -170.36 -55.61 REMARK 500 10 ARG A 177 -70.28 -57.93 REMARK 500 10 LYS A 185 12.19 82.92 REMARK 500 10 LYS A 187 -47.29 -140.32 REMARK 500 10 PRO A 203 105.86 -51.71 REMARK 500 11 ASP A 130 115.79 152.96 REMARK 500 11 ASP A 131 111.53 18.04 REMARK 500 11 LEU A 142 -88.89 -71.12 REMARK 500 11 SER A 143 -179.69 168.27 REMARK 500 11 ASP A 167 57.67 37.08 REMARK 500 11 ARG A 177 -61.48 -92.02 REMARK 500 11 LYS A 185 44.85 85.20 REMARK 500 11 ALA A 186 -157.82 -75.41 REMARK 500 11 LYS A 187 -49.76 -130.59 REMARK 500 12 SER A 127 150.10 70.28 REMARK 500 12 MET A 129 85.98 49.80 REMARK 500 12 ASP A 131 -170.64 -179.18 REMARK 500 12 ALA A 132 -66.85 -108.04 REMARK 500 12 LEU A 142 -87.21 -67.16 REMARK 500 12 SER A 143 174.05 173.48 REMARK 500 12 GLU A 146 -77.35 -54.30 REMARK 500 12 LYS A 185 50.35 82.01 REMARK 500 12 SER A 188 -175.22 -177.58 REMARK 500 12 PHE A 201 50.38 -99.75 REMARK 500 12 PRO A 203 93.37 -56.01 REMARK 500 13 MET A 129 85.40 44.32 REMARK 500 13 ASP A 130 -147.30 -129.22 REMARK 500 13 ASP A 131 -178.80 -50.28 REMARK 500 13 SER A 143 -163.03 170.03 REMARK 500 13 VAL A 180 -70.89 -59.68 REMARK 500 13 LYS A 185 31.76 84.59 REMARK 500 13 LEU A 192 -72.24 -54.21 REMARK 500 13 PHE A 201 56.38 -105.73 REMARK 500 13 PRO A 203 139.14 -37.47 REMARK 500 14 HIS A 128 94.99 174.24 REMARK 500 14 MET A 129 77.55 64.85 REMARK 500 14 ASP A 130 -85.18 -99.51 REMARK 500 14 LEU A 142 -84.15 -52.81 REMARK 500 14 SER A 143 -173.05 174.32 REMARK 500 14 LEU A 150 -74.31 -45.64 REMARK 500 14 ALA A 186 -161.15 -67.45 REMARK 500 14 LEU A 192 -70.22 -49.04 REMARK 500 14 PHE A 201 49.84 -83.89 REMARK 500 14 PRO A 203 172.40 -53.00 REMARK 500 15 ASP A 130 -103.52 -93.37 REMARK 500 15 LEU A 142 -75.75 -90.90 REMARK 500 15 SER A 143 177.51 166.59 REMARK 500 15 GLN A 148 -72.91 -75.31 REMARK 500 15 LYS A 185 17.86 80.53 REMARK 500 15 ALA A 186 -161.75 -78.94 REMARK 500 15 LYS A 187 -54.52 -138.42 REMARK 500 15 LEU A 192 -76.76 -50.97 REMARK 500 15 PRO A 203 -170.31 -52.46 REMARK 500 16 SER A 127 -72.27 -118.82 REMARK 500 16 MET A 129 98.57 51.12 REMARK 500 16 ASP A 130 -147.72 -124.11 REMARK 500 16 ASP A 131 -171.70 -53.76 REMARK 500 16 LEU A 142 -71.72 -78.91 REMARK 500 16 SER A 143 -174.10 161.68 REMARK 500 16 VAL A 180 -73.64 -46.16 REMARK 500 16 LYS A 185 24.23 80.62 REMARK 500 16 ALA A 186 -158.31 -66.28 REMARK 500 16 LYS A 187 -46.83 -143.56 REMARK 500 17 SER A 127 -64.51 -155.35 REMARK 500 17 MET A 129 81.04 50.52 REMARK 500 17 ASP A 130 -87.36 -101.27 REMARK 500 17 LEU A 142 -153.96 -71.30 REMARK 500 17 GLN A 148 -70.69 -76.19 REMARK 500 17 LEU A 150 -71.47 -44.35 REMARK 500 17 SER A 151 -30.97 -37.31 REMARK 500 17 VAL A 180 -72.10 -50.66 REMARK 500 17 ALA A 186 -157.35 -79.68 REMARK 500 17 LYS A 187 -65.87 -135.50 REMARK 500 17 PHE A 201 55.67 -103.98 REMARK 500 18 SER A 127 44.80 -166.24 REMARK 500 18 ASP A 130 -149.03 -128.58 REMARK 500 18 ALA A 132 -78.30 -50.25 REMARK 500 18 LEU A 142 -152.33 -73.10 REMARK 500 18 ASN A 159 -32.16 -38.02 REMARK 500 18 ALA A 186 -169.99 -60.05 REMARK 500 18 PHE A 201 53.42 -117.16 REMARK 500 19 SER A 127 -40.59 -166.87 REMARK 500 19 ASP A 130 -149.54 -133.03 REMARK 500 19 ALA A 132 -73.08 -43.33 REMARK 500 19 LEU A 142 -91.04 -59.56 REMARK 500 19 SER A 143 179.97 173.22 REMARK 500 19 ASN A 159 -33.30 -34.75 REMARK 500 19 ASP A 167 46.90 37.24 REMARK 500 19 LYS A 187 -70.26 -135.58 REMARK 500 19 PHE A 201 47.36 -98.19 REMARK 500 20 SER A 127 60.23 60.27 REMARK 500 20 HIS A 128 -165.66 56.49 REMARK 500 20 MET A 129 34.87 -157.84 REMARK 500 20 ASP A 130 124.64 153.48 REMARK 500 20 ASP A 131 127.33 -8.26 REMARK 500 20 LEU A 142 -137.35 -62.24 REMARK 500 20 HIS A 176 -71.08 -51.81 REMARK 500 20 ALA A 186 -150.99 -81.63 REMARK 500 20 LYS A 187 -47.46 -149.58 REMARK 500 20 LEU A 192 -72.34 -47.43 REMARK 500 20 PHE A 201 59.98 -115.91 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1X3U A 130 204 UNP P10958 FIXJ_RHIME 130 204
SEQADV 1X3U GLY A 126 UNP P10958 CLONING ARTIFACT SEQADV 1X3U SER A 127 UNP P10958 CLONING ARTIFACT SEQADV 1X3U HIS A 128 UNP P10958 CLONING ARTIFACT SEQADV 1X3U MET A 129 UNP P10958 CLONING ARTIFACT
SEQRES 1 A 79 GLY SER HIS MET ASP ASP ALA ASN ASP ILE ARG ALA ARG SEQRES 2 A 79 LEU GLN THR LEU SER GLU ARG GLU ARG GLN VAL LEU SER SEQRES 3 A 79 ALA VAL VAL ALA GLY LEU PRO ASN LYS SER ILE ALA TYR SEQRES 4 A 79 ASP LEU ASP ILE SER PRO ARG THR VAL GLU VAL HIS ARG SEQRES 5 A 79 ALA ASN VAL MET ALA LYS MET LYS ALA LYS SER LEU PRO SEQRES 6 A 79 HIS LEU VAL ARG MET ALA LEU ALA GLY GLY PHE GLY PRO SEQRES 7 A 79 SER
HELIX 1 1 ALA A 132 SER A 143 1 12 HELIX 2 2 SER A 143 VAL A 154 1 12 HELIX 3 3 PRO A 158 LEU A 166 1 9 HELIX 4 4 SER A 169 MET A 184 1 16 HELIX 5 5 SER A 188 GLY A 200 1 13
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000