10 20 30 40 50 60 70 80 1WZ0 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-FEB-05 1WZ0
TITLE SOLUTION STRUCTURE OF HUMAN SUMO-2 (SMT3B), A UBIQUITIN- TITLE 2 LIKE PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-LIKE PROTEIN SMT3B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN-LIKE MOLECULE; COMPND 5 SYNONYM: SENTRIN 2, HSMT3; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMT3B; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040510-09; SOURCE 8 OTHER_DETAILS: CELL-FREE SYNTHESIS
KEYWDS SUMO-2, UBIQUITIN-LIKE MOLECULE, STRUCTURAL GENOMICS, KEYWDS 2 SENTRIN2, NPPFSA, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 3 INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1WZ0 1 VERSN REVDAT 1 21-AUG-05 1WZ0 0
JRNL AUTH C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF HUMAN SUMO-2 (SMT3B), A JRNL TITL 2 UBIQUITIN-LIKE PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.8 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1WZ0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-FEB-05. REMARK 100 THE RCSB ID CODE IS RCSB024171.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.21MM PROTEIN U-15N, 13C; REMARK 210 20MM D-TRIS-HCL (PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.921, CYANA 1.0.8 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 13 90.57 -69.75 REMARK 500 1 ASN A 22 42.88 -83.63 REMARK 500 1 LEU A 47 -19.44 -48.29 REMARK 500 2 PRO A 13 0.06 -69.81 REMARK 500 2 LYS A 18 60.25 -113.39 REMARK 500 2 THR A 19 46.56 34.54 REMARK 500 2 ASP A 33 49.01 -86.71 REMARK 500 2 HIS A 44 37.98 -98.29 REMARK 500 2 MET A 85 99.60 -61.57 REMARK 500 3 ALA A 9 123.14 -171.21 REMARK 500 3 GLU A 11 49.29 -102.87 REMARK 500 3 LYS A 12 54.03 34.33 REMARK 500 3 PRO A 13 0.40 -69.79 REMARK 500 3 ASP A 33 31.51 -83.69 REMARK 500 3 HIS A 44 41.23 -95.43 REMARK 500 3 MET A 85 99.94 -57.42 REMARK 500 3 THR A 98 117.12 -38.02 REMARK 500 4 GLU A 11 59.00 -93.76 REMARK 500 4 PRO A 13 80.52 -69.75 REMARK 500 4 ASN A 22 51.51 -91.10 REMARK 500 4 GLN A 32 176.26 -49.11 REMARK 500 5 PRO A 13 1.89 -69.78 REMARK 500 5 ASP A 33 44.10 72.54 REMARK 500 5 LEU A 47 -19.28 -49.41 REMARK 500 5 MET A 85 119.21 -37.05 REMARK 500 5 ASP A 89 -174.99 -68.24 REMARK 500 5 GLN A 97 125.57 -39.13 REMARK 500 5 SER A 102 118.60 -36.07 REMARK 500 6 GLU A 11 42.29 -91.38 REMARK 500 6 LYS A 12 53.70 36.98 REMARK 500 6 ASP A 23 31.54 73.83 REMARK 500 6 SER A 35 177.48 -58.68 REMARK 500 6 MET A 85 106.74 -51.18 REMARK 500 6 ASP A 89 -175.25 -66.15 REMARK 500 7 ASP A 10 46.54 -83.09 REMARK 500 7 GLU A 86 -71.20 -94.80 REMARK 500 7 GLU A 88 29.51 43.26 REMARK 500 8 ALA A 9 -60.88 -105.35 REMARK 500 8 GLU A 11 39.66 -86.51 REMARK 500 8 GLU A 86 -74.47 -107.17 REMARK 500 8 GLU A 88 27.05 39.70 REMARK 500 8 ASP A 89 -175.03 -62.95 REMARK 500 9 PRO A 13 0.61 -69.77 REMARK 500 9 LYS A 14 46.52 -91.58 REMARK 500 9 THR A 19 -43.65 -132.59 REMARK 500 9 ASN A 21 142.22 -34.52 REMARK 500 9 HIS A 44 37.12 -87.05 REMARK 500 9 SER A 99 134.05 -170.38 REMARK 500 9 PRO A 101 3.80 -69.81 REMARK 500 9 SER A 102 122.38 -33.56 REMARK 500 10 ASP A 10 45.51 -90.90 REMARK 500 10 THR A 19 50.96 38.95 REMARK 500 10 ASN A 21 161.90 -43.25 REMARK 500 10 GLN A 32 34.49 38.56 REMARK 500 10 ASP A 89 -177.26 -66.91 REMARK 500 10 SER A 99 47.80 -104.92 REMARK 500 10 SER A 102 46.73 37.63 REMARK 500 11 GLU A 11 40.48 -104.53 REMARK 500 11 GLN A 32 48.22 -84.31 REMARK 500 11 SER A 35 123.98 -170.39 REMARK 500 12 PRO A 13 0.50 -69.79 REMARK 500 12 ASN A 22 49.48 -85.12 REMARK 500 12 ASP A 33 31.39 -83.89 REMARK 500 12 ASP A 78 155.95 -48.17 REMARK 500 12 MET A 85 98.44 -58.28 REMARK 500 12 GLU A 86 -178.24 -62.69 REMARK 500 12 GLU A 88 38.22 36.29 REMARK 500 12 GLN A 97 109.56 -35.53 REMARK 500 13 ALA A 9 40.03 -99.66 REMARK 500 13 LYS A 14 159.00 -40.18 REMARK 500 13 VAL A 17 137.16 -173.59 REMARK 500 13 THR A 19 110.66 -174.15 REMARK 500 13 GLU A 86 -74.23 -87.34 REMARK 500 13 GLU A 88 29.63 42.83 REMARK 500 13 SER A 102 41.41 -99.11 REMARK 500 13 SER A 103 42.18 71.93 REMARK 500 14 PRO A 13 1.18 -69.78 REMARK 500 14 ASN A 21 88.57 -63.14 REMARK 500 14 HIS A 24 178.66 -54.92 REMARK 500 14 HIS A 44 36.14 -94.06 REMARK 500 14 LEU A 47 -18.87 -48.86 REMARK 500 14 ASP A 70 28.57 42.87 REMARK 500 14 GLU A 86 -75.33 -109.07 REMARK 500 14 GLU A 88 25.26 39.61 REMARK 500 14 ASP A 89 -174.76 -63.70 REMARK 500 15 SER A 5 111.06 -161.68 REMARK 500 15 GLU A 11 46.14 -84.14 REMARK 500 15 ASP A 33 43.07 -83.63 REMARK 500 15 HIS A 44 40.71 -105.62 REMARK 500 15 GLU A 88 25.01 43.45 REMARK 500 15 SER A 103 -59.00 -121.12 REMARK 500 16 ASP A 33 47.75 -90.78 REMARK 500 16 ASP A 89 -175.78 -58.97 REMARK 500 16 GLN A 97 52.18 -111.19 REMARK 500 16 SER A 99 144.95 -175.02 REMARK 500 17 LYS A 14 156.73 -45.33 REMARK 500 17 ASN A 22 145.71 -38.00 REMARK 500 17 ASP A 33 40.11 -78.58 REMARK 500 17 MET A 85 98.56 -66.61 REMARK 500 17 ASP A 89 -174.91 -66.94 REMARK 500 17 PRO A 101 97.86 -69.79 REMARK 500 17 SER A 102 41.24 -88.32 REMARK 500 18 GLU A 11 41.99 -101.22 REMARK 500 18 LYS A 12 53.31 35.34 REMARK 500 18 PRO A 13 84.12 -69.73 REMARK 500 18 GLU A 88 25.41 39.32 REMARK 500 18 ASP A 89 -175.46 -62.06 REMARK 500 18 SER A 99 38.11 36.97 REMARK 500 19 SER A 6 173.40 -48.97 REMARK 500 19 LYS A 14 141.26 -174.79 REMARK 500 19 GLN A 32 170.43 -45.08 REMARK 500 20 SER A 2 138.12 -170.55 REMARK 500 20 SER A 6 -54.27 -120.77 REMARK 500 20 LYS A 14 138.62 -172.00 REMARK 500 20 ASP A 33 39.15 -79.10 REMARK 500 20 ASP A 89 -175.97 -66.16 REMARK 500 20 PRO A 101 0.92 -69.79 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001000424.2 RELATED DB: TARGETDB
DBREF 1WZ0 A 8 98 UNP P61956 SUMO2_HUMAN 1 91
SEQADV 1WZ0 GLY A 1 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 SER A 2 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 SER A 3 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 GLY A 4 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 SER A 5 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 SER A 6 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 GLY A 7 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 SER A 99 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 GLY A 100 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 PRO A 101 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 SER A 102 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 SER A 103 UNP P61956 CLONING ARTIFACT SEQADV 1WZ0 GLY A 104 UNP P61956 CLONING ARTIFACT
SEQRES 1 A 104 GLY SER SER GLY SER SER GLY MET ALA ASP GLU LYS PRO SEQRES 2 A 104 LYS GLU GLY VAL LYS THR GLU ASN ASN ASP HIS ILE ASN SEQRES 3 A 104 LEU LYS VAL ALA GLY GLN ASP GLY SER VAL VAL GLN PHE SEQRES 4 A 104 LYS ILE LYS ARG HIS THR PRO LEU SER LYS LEU MET LYS SEQRES 5 A 104 ALA TYR CYS GLU ARG GLN GLY LEU SER MET ARG GLN ILE SEQRES 6 A 104 ARG PHE ARG PHE ASP GLY GLN PRO ILE ASN GLU THR ASP SEQRES 7 A 104 THR PRO ALA GLN LEU GLU MET GLU ASP GLU ASP THR ILE SEQRES 8 A 104 ASP VAL PHE GLN GLN GLN THR SER GLY PRO SER SER GLY
HELIX 1 1 LEU A 47 GLN A 58 1 12
SHEET 1 A 5 VAL A 36 ILE A 41 0 SHEET 2 A 5 ILE A 25 ALA A 30 -1 N VAL A 29 O VAL A 37 SHEET 3 A 5 ASP A 89 VAL A 93 1 O ASP A 89 N LYS A 28 SHEET 4 A 5 PHE A 67 PHE A 69 -1 N ARG A 68 O ASP A 92 SHEET 5 A 5 GLN A 72 PRO A 73 0
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000