10 20 30 40 50 60 70 80 1WX9 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-JAN-05 1WX9
TITLE SOLUTION STRUCTURE OF THE N-TERMINAL UBIQUITIN-LIKE DOMAIN TITLE 2 IN THE HUMAN BAT3 PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA-B ASSOCIATED TRANSCRIPT-3 ISOFORM B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN-LIKE DOMAIN; COMPND 5 SYNONYM: BAT3; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAT3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040921-06; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS UBIQUITIN-LIKE DOMAIN, BAT3 PROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 3 UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1WX9 1 VERSN REVDAT 1 20-JUL-05 1WX9 0
JRNL AUTH C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE N-TERMINAL JRNL TITL 2 UBIQUITIN-LIKE DOMAIN IN THE HUMAN BAT3 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.8 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1WX9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JAN-05. REMARK 100 THE RCSB ID CODE IS RCSB024109.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.23MM PROTEIN U-15N, 13C, REMARK 210 20MM D-TRIS-HCL, 100MM NACL, REMARK 210 1MM D-DTT, 0.02% NAN3, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.921, CYANA 1.0.8 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 97.06 55.53 REMARK 500 1 LEU A 15 44.40 -89.58 REMARK 500 1 ASP A 16 34.56 -161.99 REMARK 500 1 SER A 17 75.94 42.09 REMARK 500 1 MET A 28 148.71 -38.13 REMARK 500 1 ARG A 49 81.49 -174.35 REMARK 500 1 ASN A 67 47.40 81.47 REMARK 500 1 ALA A 79 162.63 60.57 REMARK 500 1 SER A 85 95.25 62.22 REMARK 500 2 SER A 6 86.58 51.71 REMARK 500 2 THR A 14 -162.66 -78.90 REMARK 500 2 LEU A 15 53.07 -91.34 REMARK 500 2 ASP A 16 26.15 -157.07 REMARK 500 2 SER A 17 62.88 39.48 REMARK 500 2 MET A 28 152.28 -37.33 REMARK 500 2 ARG A 49 81.41 -165.07 REMARK 500 2 GLN A 53 -66.44 67.04 REMARK 500 2 SER A 81 -71.06 -148.88 REMARK 500 2 SER A 84 -62.70 -126.49 REMARK 500 3 SER A 6 157.50 176.56 REMARK 500 3 ASP A 16 36.74 -177.76 REMARK 500 3 SER A 17 72.77 38.84 REMARK 500 3 MET A 28 149.56 -37.56 REMARK 500 3 ARG A 49 76.60 -162.24 REMARK 500 3 SER A 81 -60.11 -129.02 REMARK 500 3 SER A 85 94.52 47.79 REMARK 500 4 SER A 2 161.91 59.79 REMARK 500 4 SER A 3 -58.42 -142.92 REMARK 500 4 ASP A 16 32.61 -168.73 REMARK 500 4 SER A 17 70.83 41.70 REMARK 500 4 MET A 28 146.78 -37.71 REMARK 500 4 ARG A 49 76.15 -171.72 REMARK 500 4 GLN A 53 -36.47 87.42 REMARK 500 4 ASN A 67 35.84 71.64 REMARK 500 4 SER A 81 -64.65 -137.69 REMARK 500 5 SER A 5 -57.83 -128.17 REMARK 500 5 SER A 17 71.63 59.98 REMARK 500 5 THR A 19 135.30 -38.76 REMARK 500 5 MET A 28 147.05 -38.19 REMARK 500 5 ARG A 49 87.40 -166.23 REMARK 500 5 GLN A 53 -37.81 86.33 REMARK 500 5 ASN A 67 46.73 79.88 REMARK 500 5 ALA A 79 160.55 66.33 REMARK 500 6 SER A 2 128.70 63.93 REMARK 500 6 SER A 3 -61.13 -125.27 REMARK 500 6 THR A 14 -169.16 -114.01 REMARK 500 6 MET A 28 148.18 -37.23 REMARK 500 6 SER A 42 32.08 74.06 REMARK 500 6 ARG A 49 76.56 -169.15 REMARK 500 6 ARG A 78 152.86 -47.94 REMARK 500 6 ALA A 79 106.19 -168.26 REMARK 500 6 SER A 81 -60.66 -167.75 REMARK 500 6 SER A 85 -58.87 -170.39 REMARK 500 7 SER A 2 153.16 -41.71 REMARK 500 7 ASP A 16 35.54 -174.97 REMARK 500 7 SER A 17 68.55 38.60 REMARK 500 7 MET A 28 150.96 -36.93 REMARK 500 7 ARG A 49 76.16 -178.81 REMARK 500 7 GLN A 53 -66.64 68.09 REMARK 500 7 SER A 81 107.68 -51.57 REMARK 500 7 SER A 85 111.62 60.30 REMARK 500 8 SER A 3 113.81 -175.07 REMARK 500 8 THR A 14 -167.27 -124.71 REMARK 500 8 MET A 28 154.41 -37.24 REMARK 500 8 ARG A 49 74.27 -168.59 REMARK 500 8 GLN A 53 -65.50 71.30 REMARK 500 8 ARG A 78 161.43 -48.08 REMARK 500 9 ASP A 16 35.42 -174.17 REMARK 500 9 SER A 17 74.97 39.31 REMARK 500 9 GLN A 18 88.08 -150.73 REMARK 500 9 MET A 28 145.99 -37.02 REMARK 500 9 ARG A 49 85.28 -157.88 REMARK 500 9 GLN A 53 -63.87 69.27 REMARK 500 9 ASN A 67 47.76 81.53 REMARK 500 9 ARG A 78 171.91 -51.06 REMARK 500 9 ALA A 79 153.57 68.92 REMARK 500 10 SER A 2 149.81 178.08 REMARK 500 10 LEU A 15 46.67 -87.72 REMARK 500 10 ASP A 16 28.16 -160.33 REMARK 500 10 MET A 28 153.45 -36.87 REMARK 500 10 ARG A 49 78.60 -165.28 REMARK 500 10 GLN A 53 -68.23 66.33 REMARK 500 10 ALA A 79 105.43 61.44 REMARK 500 11 SER A 2 133.61 63.40 REMARK 500 11 SER A 5 -57.98 -145.67 REMARK 500 11 LEU A 15 45.84 -90.39 REMARK 500 11 ASP A 16 32.48 -159.29 REMARK 500 11 SER A 17 78.30 43.18 REMARK 500 11 GLN A 18 84.23 -156.20 REMARK 500 11 MET A 28 150.06 -37.22 REMARK 500 11 ARG A 49 75.06 -163.84 REMARK 500 11 GLN A 53 -67.43 66.71 REMARK 500 11 ASN A 67 46.07 80.22 REMARK 500 11 ARG A 78 -175.91 -64.09 REMARK 500 11 SER A 81 -58.41 -126.69 REMARK 500 12 SER A 2 70.61 59.40 REMARK 500 12 SER A 3 124.08 76.81 REMARK 500 12 SER A 5 107.36 57.55 REMARK 500 12 SER A 6 74.06 59.55 REMARK 500 12 LEU A 15 48.32 -94.80 REMARK 500 12 ASP A 16 30.72 -161.92 REMARK 500 12 MET A 28 147.61 -37.65 REMARK 500 12 ARG A 49 81.77 -159.16 REMARK 500 12 ASN A 67 46.07 79.37 REMARK 500 12 ARG A 78 108.20 -49.06 REMARK 500 12 ALA A 79 152.95 63.07 REMARK 500 12 SER A 84 92.75 43.46 REMARK 500 13 SER A 5 -56.77 -163.69 REMARK 500 13 THR A 14 -165.14 -73.47 REMARK 500 13 LEU A 15 55.54 -96.31 REMARK 500 13 ASP A 16 35.79 -173.82 REMARK 500 13 SER A 17 73.15 40.25 REMARK 500 13 ARG A 49 84.60 -162.33 REMARK 500 13 GLN A 53 -64.35 68.57 REMARK 500 13 ASN A 67 42.99 81.72 REMARK 500 13 SER A 85 124.29 62.75 REMARK 500 14 SER A 2 101.43 54.10 REMARK 500 14 SER A 5 86.63 -161.88 REMARK 500 14 SER A 17 48.89 79.12 REMARK 500 14 MET A 28 149.05 -38.89 REMARK 500 14 ARG A 49 73.79 -166.66 REMARK 500 14 GLN A 53 -65.25 73.30 REMARK 500 14 ASN A 67 44.99 78.22 REMARK 500 14 ARG A 78 -175.51 47.59 REMARK 500 14 SER A 81 89.58 40.57 REMARK 500 14 SER A 85 -93.08 60.48 REMARK 500 15 SER A 2 89.39 43.61 REMARK 500 15 SER A 5 -58.93 -176.90 REMARK 500 15 ASP A 16 32.06 -163.95 REMARK 500 15 SER A 17 78.65 39.60 REMARK 500 15 GLN A 18 117.33 -166.20 REMARK 500 15 MET A 28 145.51 -36.95 REMARK 500 15 ARG A 49 82.15 -166.08 REMARK 500 15 GLN A 53 -39.57 84.78 REMARK 500 15 ASN A 67 46.32 81.69 REMARK 500 15 VAL A 68 33.90 -92.58 REMARK 500 16 SER A 5 94.35 47.88 REMARK 500 16 ASP A 16 34.98 -173.28 REMARK 500 16 SER A 17 68.23 39.19 REMARK 500 16 MET A 28 149.72 -37.80 REMARK 500 16 ARG A 49 74.18 -161.88 REMARK 500 16 GLN A 53 -64.80 73.34 REMARK 500 16 ASN A 67 42.31 77.26 REMARK 500 16 SER A 81 155.70 175.60 REMARK 500 17 SER A 2 -57.48 -152.37 REMARK 500 17 SER A 5 113.49 -169.64 REMARK 500 17 SER A 6 80.07 61.63 REMARK 500 17 ASP A 16 35.93 -175.43 REMARK 500 17 SER A 17 72.82 39.62 REMARK 500 17 MET A 28 155.49 -37.54 REMARK 500 17 ARG A 49 79.36 -159.73 REMARK 500 17 GLN A 53 -37.99 83.50 REMARK 500 17 ASN A 67 40.95 81.55 REMARK 500 17 SER A 81 79.96 56.51 REMARK 500 17 SER A 84 -93.53 49.09 REMARK 500 18 SER A 3 123.53 61.63 REMARK 500 18 SER A 5 109.58 -170.26 REMARK 500 18 SER A 6 166.48 -45.78 REMARK 500 18 SER A 17 60.81 76.15 REMARK 500 18 THR A 19 124.16 -38.83 REMARK 500 18 MET A 28 150.25 -38.91 REMARK 500 18 ARG A 49 84.56 -155.58 REMARK 500 18 GLN A 53 -43.96 81.38 REMARK 500 18 ASN A 67 49.38 76.36 REMARK 500 18 VAL A 68 31.25 -92.83 REMARK 500 18 SER A 85 165.36 57.49 REMARK 500 19 SER A 2 -58.67 -172.74 REMARK 500 19 SER A 5 156.79 59.85 REMARK 500 19 ASP A 16 34.07 -168.66 REMARK 500 19 SER A 17 66.44 39.17 REMARK 500 19 MET A 28 149.37 -36.18 REMARK 500 19 ARG A 49 89.24 -163.27 REMARK 500 19 GLN A 53 -63.49 71.46 REMARK 500 19 ASN A 67 45.34 81.92 REMARK 500 19 VAL A 68 31.15 -92.84 REMARK 500 19 SER A 84 109.38 59.98 REMARK 500 20 ASP A 16 33.02 -169.87 REMARK 500 20 SER A 17 55.83 38.58 REMARK 500 20 MET A 28 148.28 -37.13 REMARK 500 20 ARG A 49 77.14 -168.70 REMARK 500 20 GLN A 53 -68.67 66.63 REMARK 500 20 ASN A 67 49.60 77.74 REMARK 500 20 ARG A 78 158.46 -40.75 REMARK 500 20 SER A 81 85.94 45.09 REMARK 500 20 SER A 84 89.04 -160.18 REMARK 500 20 SER A 85 -59.08 -132.54 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002005121.1 RELATED DB: TARGETDB
DBREF 1WX9 A 8 80 UNP Q5STX1 Q5STX1_HUMAN 17 89
SEQADV 1WX9 GLY A 1 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 2 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 3 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 4 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 5 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 6 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 7 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 81 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 82 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 PRO A 83 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 84 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 SER A 85 UNP Q5STX1 CLONING ARTIFACT SEQADV 1WX9 GLY A 86 UNP Q5STX1 CLONING ARTIFACT
SEQRES 1 A 86 GLY SER SER GLY SER SER GLY LEU GLU VAL LEU VAL LYS SEQRES 2 A 86 THR LEU ASP SER GLN THR ARG THR PHE ILE VAL GLY ALA SEQRES 3 A 86 GLN MET ASN VAL LYS GLU PHE LYS GLU HIS ILE ALA ALA SEQRES 4 A 86 SER VAL SER ILE PRO SER GLU LYS GLN ARG LEU ILE TYR SEQRES 5 A 86 GLN GLY ARG VAL LEU GLN ASP ASP LYS LYS LEU GLN GLU SEQRES 6 A 86 TYR ASN VAL GLY GLY LYS VAL ILE HIS LEU VAL GLU ARG SEQRES 7 A 86 ALA PRO SER GLY PRO SER SER GLY
HELIX 1 1 VAL A 30 VAL A 41 1 12 HELIX 2 2 LEU A 63 TYR A 66 1 4
SHEET 1 A 3 THR A 19 VAL A 24 0 SHEET 2 A 3 LEU A 8 LYS A 13 -1 N VAL A 10 O PHE A 22 SHEET 3 A 3 LYS A 71 HIS A 74 1 O HIS A 74 N LYS A 13 SHEET 1 B 2 ILE A 51 TYR A 52 0 SHEET 2 B 2 ARG A 55 VAL A 56 -1 O ARG A 55 N TYR A 52
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000