10 20 30 40 50 60 70 80 1WPO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN, HYDROLASE 23-JUL-96 1WPO
TITLE HYDROLYTIC ENZYME HUMAN CYTOMEGALOVIRUS PROTEASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN CYTOMEGALOVIRUS PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.21.-; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 5; SOURCE 3 ORGANISM_COMMON: HUMAN CYTOMEGALOVIRUS; SOURCE 4 ORGANISM_TAXID: 10359; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS COAT PROTEIN, HYDROLASE, SERINE PROTEASE, PHOSPHORYLATION, KEYWDS 2 VIRAL PROTEASE, VIRAL PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR L.TONG
REVDAT 2 24-FEB-09 1WPO 1 VERSN REVDAT 1 15-OCT-97 1WPO 0
JRNL AUTH L.TONG,C.QIAN,M.J.MASSARIOL,P.R.BONNEAU, JRNL AUTH 2 M.G.CORDINGLEY,L.LAGACE JRNL TITL A NEW SERINE-PROTEASE FOLD REVEALED BY THE CRYSTAL JRNL TITL 2 STRUCTURE OF HUMAN CYTOMEGALOVIRUS PROTEASE. JRNL REF NATURE V. 383 272 1996 JRNL REFN ISSN 0028-0836 JRNL PMID 8805706 JRNL DOI 10.1038/383272A0
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 30822 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : NULL REMARK 3 NUCLEIC ACID ATOMS : NULL REMARK 3 HETEROGEN ATOMS : NULL REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.80 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.60 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1WPO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.65000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.50000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.32500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.50000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 156.97500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.50000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.50000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.32500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.50000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.50000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 156.97500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 104.65000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: REMARK 300 THERE ARE TWO MOLECULES IN THE ASYMMETRIC UNIT, FORMING REMARK 300 A NON-CRYSTALLOGRAPHIC DIMER. THE RESIDUES IN THE FIRST REMARK 300 MOLECULE ARE NUMBERED 1 A - 256 A, AND THOSE IN THE SECOND REMARK 300 MOLECULE ARE NUMBERED 1 B - 256 B.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE PROTEASE USED HERE CONTAIN THREE MUTATIONS: REMARK 400 A143Q, T181M, AND L229M. IN ADDITION, THE PROTEASE REMARK 400 CONTAINS SELENO-METHIONYL RESIDUES (CALLED MSE) INSTEAD REMARK 400 OF REGULAR METHIONYL RESIDUES.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 MET A 3 REMARK 465 ASP A 4 REMARK 465 GLU A 5 REMARK 465 GLN A 6 REMARK 465 GLN A 7 REMARK 465 SER A 8 REMARK 465 PRO A 27 REMARK 465 ASP A 28 REMARK 465 GLU A 29 REMARK 465 ALA A 30 REMARK 465 GLU A 31 REMARK 465 LEU A 32 REMARK 465 GLN A 46 REMARK 465 GLY A 47 REMARK 465 GLN A 48 REMARK 465 GLY A 49 REMARK 465 GLN A 50 REMARK 465 PRO A 51 REMARK 465 SER A 52 REMARK 465 LEU A 53 REMARK 465 SER A 54 REMARK 465 ARG A 136 REMARK 465 ARG A 137 REMARK 465 CYS A 138 REMARK 465 ASP A 139 REMARK 465 ASP A 140 REMARK 465 VAL A 141 REMARK 465 GLU A 142 REMARK 465 ALA A 143 REMARK 465 ALA A 144 REMARK 465 THR A 145 REMARK 465 SER A 146 REMARK 465 LEU A 147 REMARK 465 SER A 148 REMARK 465 GLY A 149 REMARK 465 SER A 150 REMARK 465 GLU A 151 REMARK 465 THR A 152 REMARK 465 CYS A 202 REMARK 465 GLY A 203 REMARK 465 SER A 204 REMARK 465 THR A 205 REMARK 465 ALA A 206 REMARK 465 VAL A 207 REMARK 465 ASP A 208 REMARK 465 ALA A 209 REMARK 465 SER A 210 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 MET B 3 REMARK 465 ASP B 4 REMARK 465 GLU B 5 REMARK 465 GLN B 6 REMARK 465 GLN B 7 REMARK 465 SER B 8 REMARK 465 GLN B 9 REMARK 465 GLN B 46 REMARK 465 GLY B 47 REMARK 465 GLN B 48 REMARK 465 GLY B 49 REMARK 465 GLN B 50 REMARK 465 PRO B 51 REMARK 465 SER B 52 REMARK 465 ARG B 136 REMARK 465 ARG B 137 REMARK 465 CYS B 138 REMARK 465 ASP B 139 REMARK 465 ASP B 140 REMARK 465 VAL B 141 REMARK 465 GLU B 142 REMARK 465 ALA B 143 REMARK 465 ALA B 144 REMARK 465 THR B 145 REMARK 465 SER B 146 REMARK 465 LEU B 147 REMARK 465 SER B 148 REMARK 465 GLY B 149 REMARK 465 SER B 150 REMARK 465 GLU B 151 REMARK 465 THR B 152 REMARK 465 THR B 153 REMARK 465 PRO B 154 REMARK 465 CYS B 202 REMARK 465 GLY B 203 REMARK 465 SER B 204 REMARK 465 THR B 205 REMARK 465 ALA B 206 REMARK 465 VAL B 207 REMARK 465 ASP B 208 REMARK 465 ALA B 209 REMARK 465 SER B 210
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA B 12 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 -51.62 166.60 REMARK 500 VAL A 11 24.86 -75.84 REMARK 500 TYR A 23 7.03 -66.30 REMARK 500 LEU A 43 -66.68 -102.51 REMARK 500 SER A 113 -79.72 1.62 REMARK 500 HIS A 157 -176.94 -177.71 REMARK 500 THR A 169 40.37 -99.83 REMARK 500 GLN A 200 -79.04 -56.82 REMARK 500 SER A 216 -162.52 -113.23 REMARK 500 GLU A 233 48.00 -102.68 REMARK 500 ALA B 67 55.88 -102.37 REMARK 500 PRO B 111 -162.56 -72.94 REMARK 500 SER B 113 -73.93 8.38 REMARK 500 TYR B 128 64.58 -118.70 REMARK 500 SER B 134 -177.02 178.33 REMARK 500 THR B 169 41.74 -87.15 REMARK 500 TRP B 199 79.18 -66.17 REMARK 500 GLN B 200 -50.14 146.80 REMARK 500 SER B 216 -151.67 -116.42 REMARK 500 GLU B 233 35.67 -97.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 230 0.07 SIDE_CHAIN REMARK 500 TYR B 230 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 757 DISTANCE = 6.29 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 561
DBREF 1WPO A 1 256 UNP P16753 VP40_HCMVA 1 256 DBREF 1WPO B 1 256 UNP P16753 VP40_HCMVA 1 256
SEQADV 1WPO MSE A 75 UNP P16753 MET 75 CONFLICT SEQADV 1WPO MSE A 181 UNP P16753 THR 181 ENGINEERED SEQADV 1WPO MSE A 229 UNP P16753 LEU 229 ENGINEERED SEQADV 1WPO MSE B 75 UNP P16753 MET 75 MODIFIED RESIDUE SEQADV 1WPO MSE B 181 UNP P16753 THR 181 ENGINEERED SEQADV 1WPO MSE B 229 UNP P16753 LEU 229 ENGINEERED
SEQRES 1 A 256 MET THR MET ASP GLU GLN GLN SER GLN ALA VAL ALA PRO SEQRES 2 A 256 VAL TYR VAL GLY GLY PHE LEU ALA ARG TYR ASP GLN SER SEQRES 3 A 256 PRO ASP GLU ALA GLU LEU LEU LEU PRO ARG ASP VAL VAL SEQRES 4 A 256 GLU HIS TRP LEU HIS ALA GLN GLY GLN GLY GLN PRO SER SEQRES 5 A 256 LEU SER VAL ALA LEU PRO LEU ASN ILE ASN HIS ASP ASP SEQRES 6 A 256 THR ALA VAL VAL GLY HIS VAL ALA ALA MSE GLN SER VAL SEQRES 7 A 256 ARG ASP GLY LEU PHE CYS LEU GLY CYS VAL THR SER PRO SEQRES 8 A 256 ARG PHE LEU GLU ILE VAL ARG ARG ALA SER GLU LYS SER SEQRES 9 A 256 GLU LEU VAL SER ARG GLY PRO VAL SER PRO LEU GLN PRO SEQRES 10 A 256 ASP LYS VAL VAL GLU PHE LEU SER GLY SER TYR ALA GLY SEQRES 11 A 256 LEU SER LEU SER SER ARG ARG CYS ASP ASP VAL GLU ALA SEQRES 12 A 256 ALA THR SER LEU SER GLY SER GLU THR THR PRO PHE LYS SEQRES 13 A 256 HIS VAL ALA LEU CYS SER VAL GLY ARG ARG ARG GLY THR SEQRES 14 A 256 LEU ALA VAL TYR GLY ARG ASP PRO GLU TRP VAL MSE GLN SEQRES 15 A 256 ARG PHE PRO ASP LEU THR ALA ALA ASP ARG ASP GLY LEU SEQRES 16 A 256 ARG ALA GLN TRP GLN ARG CYS GLY SER THR ALA VAL ASP SEQRES 17 A 256 ALA SER GLY ASP PRO PHE ARG SER ASP SER TYR GLY LEU SEQRES 18 A 256 LEU GLY ASN SER VAL ASP ALA MSE TYR ILE ARG GLU ARG SEQRES 19 A 256 LEU PRO LYS LEU ARG TYR ASP LYS GLN LEU VAL GLY VAL SEQRES 20 A 256 THR GLU ARG GLU SER TYR VAL LYS ALA SEQRES 1 B 256 MET THR MET ASP GLU GLN GLN SER GLN ALA VAL ALA PRO SEQRES 2 B 256 VAL TYR VAL GLY GLY PHE LEU ALA ARG TYR ASP GLN SER SEQRES 3 B 256 PRO ASP GLU ALA GLU LEU LEU LEU PRO ARG ASP VAL VAL SEQRES 4 B 256 GLU HIS TRP LEU HIS ALA GLN GLY GLN GLY GLN PRO SER SEQRES 5 B 256 LEU SER VAL ALA LEU PRO LEU ASN ILE ASN HIS ASP ASP SEQRES 6 B 256 THR ALA VAL VAL GLY HIS VAL ALA ALA MSE GLN SER VAL SEQRES 7 B 256 ARG ASP GLY LEU PHE CYS LEU GLY CYS VAL THR SER PRO SEQRES 8 B 256 ARG PHE LEU GLU ILE VAL ARG ARG ALA SER GLU LYS SER SEQRES 9 B 256 GLU LEU VAL SER ARG GLY PRO VAL SER PRO LEU GLN PRO SEQRES 10 B 256 ASP LYS VAL VAL GLU PHE LEU SER GLY SER TYR ALA GLY SEQRES 11 B 256 LEU SER LEU SER SER ARG ARG CYS ASP ASP VAL GLU ALA SEQRES 12 B 256 ALA THR SER LEU SER GLY SER GLU THR THR PRO PHE LYS SEQRES 13 B 256 HIS VAL ALA LEU CYS SER VAL GLY ARG ARG ARG GLY THR SEQRES 14 B 256 LEU ALA VAL TYR GLY ARG ASP PRO GLU TRP VAL MSE GLN SEQRES 15 B 256 ARG PHE PRO ASP LEU THR ALA ALA ASP ARG ASP GLY LEU SEQRES 16 B 256 ARG ALA GLN TRP GLN ARG CYS GLY SER THR ALA VAL ASP SEQRES 17 B 256 ALA SER GLY ASP PRO PHE ARG SER ASP SER TYR GLY LEU SEQRES 18 B 256 LEU GLY ASN SER VAL ASP ALA MSE TYR ILE ARG GLU ARG SEQRES 19 B 256 LEU PRO LYS LEU ARG TYR ASP LYS GLN LEU VAL GLY VAL SEQRES 20 B 256 THR GLU ARG GLU SER TYR VAL LYS ALA
MODRES 1WPO MSE A 75 MET SELENOMETHIONINE MODRES 1WPO MSE A 181 MET SELENOMETHIONINE MODRES 1WPO MSE A 229 MET SELENOMETHIONINE MODRES 1WPO MSE B 75 MET SELENOMETHIONINE MODRES 1WPO MSE B 181 MET SELENOMETHIONINE MODRES 1WPO MSE B 229 MET SELENOMETHIONINE
HET MSE A 75 8 HET MSE A 181 8 HET MSE A 229 8 HET MSE B 75 8 HET MSE B 181 8 HET MSE B 229 8 HET SO4 B 561 5
HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION
FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *249(H2 O)
HELIX 1 1 ARG A 36 TRP A 42 1 7 HELIX 2 2 PRO A 91 LYS A 103 1 13 HELIX 3 3 GLU A 105 ARG A 109 1 5 HELIX 4 4 LYS A 119 SER A 127 1 9 HELIX 5 5 ALA A 189 GLN A 198 1 10 HELIX 6 6 SER A 218 ASP A 227 1 10 HELIX 7 7 ARG A 234 LEU A 244 1 11 HELIX 8 8 VAL A 247 GLU A 249 5 3 HELIX 9 9 ARG B 36 HIS B 44 1 9 HELIX 10 10 PRO B 91 LYS B 103 1 13 HELIX 11 11 GLU B 105 ARG B 109 1 5 HELIX 12 12 LYS B 119 SER B 127 1 9 HELIX 13 13 ALA B 189 GLN B 198 1 10 HELIX 14 14 SER B 218 ASP B 227 1 10 HELIX 15 15 ARG B 234 VAL B 245 1 12 HELIX 16 16 VAL B 247 GLU B 249 5 3
SHEET 1 A 7 VAL A 172 GLY A 174 0 SHEET 2 A 7 VAL A 14 ARG A 22 -1 N GLY A 17 O VAL A 172 SHEET 3 A 7 GLY A 81 VAL A 88 -1 N VAL A 88 O VAL A 14 SHEET 4 A 7 VAL A 68 ALA A 74 -1 N ALA A 74 O LEU A 85 SHEET 5 A 7 PRO A 58 ILE A 61 -1 N LEU A 59 O VAL A 69 SHEET 6 A 7 HIS A 157 CYS A 161 1 N VAL A 158 O PRO A 58 SHEET 7 A 7 GLY A 130 LEU A 133 -1 N SER A 132 O ALA A 159 SHEET 1 B 7 VAL B 172 GLY B 174 0 SHEET 2 B 7 VAL B 14 ARG B 22 -1 N GLY B 17 O VAL B 172 SHEET 3 B 7 GLY B 81 VAL B 88 -1 N VAL B 88 O VAL B 14 SHEET 4 B 7 VAL B 68 ALA B 74 -1 N ALA B 74 O LEU B 85 SHEET 5 B 7 PRO B 58 ILE B 61 -1 N LEU B 59 O VAL B 69 SHEET 6 B 7 HIS B 157 CYS B 161 1 N VAL B 158 O PRO B 58 SHEET 7 B 7 GLY B 130 LEU B 133 -1 N SER B 132 O ALA B 159
LINK N MSE A 75 C ALA A 74 1555 1555 1.33 LINK C MSE A 75 N GLN A 76 1555 1555 1.32 LINK N MSE A 181 C VAL A 180 1555 1555 1.32 LINK C MSE A 181 N GLN A 182 1555 1555 1.33 LINK N MSE A 229 C ALA A 228 1555 1555 1.33 LINK C MSE A 229 N TYR A 230 1555 1555 1.33 LINK N MSE B 75 C ALA B 74 1555 1555 1.33 LINK C MSE B 75 N GLN B 76 1555 1555 1.33 LINK N MSE B 181 C VAL B 180 1555 1555 1.32 LINK C MSE B 181 N GLN B 182 1555 1555 1.33 LINK N MSE B 229 C ALA B 228 1555 1555 1.33 LINK C MSE B 229 N TYR B 230 1555 1555 1.33
SITE 1 AC1 6 LEU B 32 ARG B 92 ARG B 166 ARG B 167 SITE 2 AC1 6 HOH B 604 HOH B 606
CRYST1 71.000 71.000 209.300 90.00 90.00 90.00 P 41 21 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014085 0.000000 0.000000 0.00000
SCALE2 0.000000 0.014085 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004778 0.00000