10 20 30 40 50 60 70 80 1WOT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-AUG-04 1WOT
TITLE STRUCTURE OF PUTATIVE MINIMAL NUCLEOTIDYLTRANSFERASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MINIMAL NUCLEOTIDYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS ALPHA AND BETA, STRUCTURAL GENOMICS, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.SUZUKI,H.HATANAKA,T.HONDOH,A.OKUMURA,Y.KURODA,S.KURAMITSU, AUTHOR 2 T.SHIBATA,Y.INOUE,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1WOT 1 VERSN REVDAT 1 07-SEP-04 1WOT 0
SPRSDE 07-SEP-04 1WOT 1J0L
JRNL AUTH S.SUZUKI,H.HATANAKA,T.HONDOH,A.OKUMURA,Y.KURODA, JRNL AUTH 2 S.KURAMITSU,T.SHIBATA,Y.INOUE,S.YOKOYAMA JRNL TITL STRUCTURE OF PUTATIVE MINIMAL JRNL TITL 2 NUCLEOTIDYLTRANSFERASE JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1WOT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB023826.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.12 REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : 20MM NAPI, 100MM NACL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.1, VNMR 6.1B, CYANA REMARK 210 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A -1 154.47 68.80 REMARK 500 1 HIS A 0 7.63 90.21 REMARK 500 1 ALA A 36 114.59 169.76 REMARK 500 1 GLU A 49 -155.70 -66.82 REMARK 500 1 ARG A 78 -73.60 -58.88 REMARK 500 1 LEU A 80 -175.66 -55.40 REMARK 500 2 HIS A 0 98.34 -173.10 REMARK 500 2 MET A 1 86.96 -176.37 REMARK 500 2 ALA A 36 105.95 -175.68 REMARK 500 2 ARG A 37 160.05 -40.58 REMARK 500 2 ARG A 71 140.18 -38.75 REMARK 500 2 LEU A 80 178.87 -55.73 REMARK 500 3 HIS A 0 137.96 -171.76 REMARK 500 3 ALA A 36 91.62 170.66 REMARK 500 3 ARG A 37 -174.80 -52.06 REMARK 500 3 GLU A 49 -174.38 -65.59 REMARK 500 4 HIS A 0 19.92 -148.50 REMARK 500 4 ALA A 36 109.65 169.69 REMARK 500 4 ARG A 37 -172.31 -59.87 REMARK 500 4 GLU A 49 -171.35 -53.71 REMARK 500 4 ALA A 92 158.09 -39.75 REMARK 500 5 MET A 1 97.48 54.49 REMARK 500 5 ARG A 24 49.64 -83.34 REMARK 500 5 ALA A 36 111.14 -175.64 REMARK 500 5 ARG A 37 160.64 -40.81 REMARK 500 5 GLU A 49 -172.22 -61.18 REMARK 500 5 GLU A 77 -30.16 -38.40 REMARK 500 6 SER A -1 79.97 40.54 REMARK 500 6 HIS A 0 137.30 -178.04 REMARK 500 6 GLU A 49 -156.72 -61.69 REMARK 500 7 SER A -1 86.63 39.41 REMARK 500 7 HIS A 0 133.05 -175.40 REMARK 500 7 MET A 1 111.31 -178.38 REMARK 500 7 VAL A 23 -47.84 -139.03 REMARK 500 7 ARG A 24 58.64 -69.31 REMARK 500 7 ALA A 36 104.31 169.34 REMARK 500 7 ARG A 37 -166.12 -63.25 REMARK 500 7 ASP A 39 22.14 -151.30 REMARK 500 7 GLU A 49 -143.75 -79.63 REMARK 500 7 LEU A 80 172.64 -56.29 REMARK 500 8 SER A -1 76.76 44.72 REMARK 500 8 HIS A 0 130.70 -171.23 REMARK 500 8 MET A 1 105.17 165.96 REMARK 500 8 ALA A 36 161.32 162.32 REMARK 500 8 ASP A 41 173.46 52.07 REMARK 500 8 GLU A 49 -168.16 -63.02 REMARK 500 8 LEU A 80 -177.74 -62.31 REMARK 500 9 SER A -1 83.56 54.54 REMARK 500 9 HIS A 0 119.86 -172.53 REMARK 500 9 ALA A 36 109.07 162.07 REMARK 500 9 ARG A 37 -172.98 -68.63 REMARK 500 9 GLU A 49 -173.54 -55.39 REMARK 500 9 LEU A 80 -175.16 -62.61 REMARK 500 10 SER A -1 89.01 -151.36 REMARK 500 10 VAL A 23 -49.88 -130.08 REMARK 500 10 ALA A 36 81.68 -177.57 REMARK 500 10 ARG A 37 178.58 -49.90 REMARK 500 10 GLU A 50 -146.39 71.98 REMARK 500 10 ALA A 92 130.63 -39.26 REMARK 500 11 SER A -1 102.50 -59.01 REMARK 500 11 MET A 1 132.10 162.49 REMARK 500 11 ALA A 22 156.46 -47.62 REMARK 500 11 ARG A 24 -51.45 84.58 REMARK 500 11 VAL A 25 106.33 56.22 REMARK 500 11 ALA A 36 106.52 173.42 REMARK 500 11 ARG A 37 177.60 -54.91 REMARK 500 11 GLU A 49 -162.10 -100.01 REMARK 500 11 GLU A 50 -150.24 49.70 REMARK 500 12 SER A -1 83.15 -64.39 REMARK 500 12 HIS A 0 132.31 -170.93 REMARK 500 12 MET A 1 97.55 168.93 REMARK 500 12 ALA A 36 86.43 -175.42 REMARK 500 12 GLU A 50 -151.72 38.01 REMARK 500 12 ARG A 71 133.39 -36.84 REMARK 500 12 LEU A 80 -178.35 -59.89 REMARK 500 13 HIS A 0 100.82 -171.00 REMARK 500 13 ARG A 37 161.20 -40.59 REMARK 500 13 GLU A 49 -162.28 -54.39 REMARK 500 13 LEU A 80 -175.52 -66.19 REMARK 500 14 HIS A 0 18.52 -145.85 REMARK 500 14 ALA A 22 158.84 -43.67 REMARK 500 14 VAL A 23 -49.04 -147.03 REMARK 500 14 ARG A 24 65.50 -110.48 REMARK 500 14 ALA A 36 -165.90 -174.97 REMARK 500 14 ASP A 39 62.63 -110.29 REMARK 500 14 GLU A 49 -164.01 -58.13 REMARK 500 15 HIS A 0 113.78 -171.60 REMARK 500 15 ASP A 2 -179.06 171.62 REMARK 500 15 VAL A 23 -50.13 -133.36 REMARK 500 15 ALA A 36 99.71 171.41 REMARK 500 15 ARG A 37 -173.68 -59.19 REMARK 500 15 GLU A 49 -151.71 -84.92 REMARK 500 15 ALA A 81 161.74 -45.15 REMARK 500 16 MET A 1 144.10 64.12 REMARK 500 16 ALA A 22 89.76 -156.76 REMARK 500 16 ARG A 24 54.25 -91.28 REMARK 500 16 ALA A 36 148.61 -175.39 REMARK 500 16 GLU A 49 -157.58 -93.96 REMARK 500 16 GLU A 50 -147.39 38.87 REMARK 500 16 LEU A 80 -176.42 -62.81 REMARK 500 17 HIS A 0 112.15 -164.40 REMARK 500 17 MET A 1 122.52 170.76 REMARK 500 17 ALA A 36 125.43 175.45 REMARK 500 17 GLU A 50 -154.64 42.15 REMARK 500 17 LEU A 80 -175.51 -67.39 REMARK 500 17 ALA A 92 115.37 -39.06 REMARK 500 18 SER A -1 120.03 -180.00 REMARK 500 18 HIS A 0 140.37 163.41 REMARK 500 18 MET A 1 99.86 -178.19 REMARK 500 18 VAL A 23 -158.36 -120.45 REMARK 500 18 ARG A 24 31.74 37.37 REMARK 500 18 VAL A 25 103.31 -49.14 REMARK 500 18 ALA A 36 122.31 173.73 REMARK 500 18 GLU A 49 -162.34 -67.18 REMARK 500 18 LEU A 80 -175.66 -60.54 REMARK 500 19 SER A -1 84.52 -67.13 REMARK 500 19 HIS A 0 30.39 -173.08 REMARK 500 19 MET A 1 -171.70 -61.77 REMARK 500 19 ARG A 24 52.80 -90.65 REMARK 500 19 ALA A 36 94.17 -160.31 REMARK 500 19 ARG A 37 158.56 -39.99 REMARK 500 19 GLU A 50 133.04 -36.81 REMARK 500 20 HIS A 0 110.46 -160.14 REMARK 500 20 ALA A 36 93.28 170.08 REMARK 500 20 ARG A 37 -175.15 -62.73 REMARK 500 20 GLU A 49 170.17 -44.76 REMARK 500 20 ARG A 71 127.81 -39.78 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1J0L RELATED DB: PDB REMARK 900 THE COORDINATES IN THIS ENTRY 1WOT ARE ESSENTIALLY THE SAME REMARK 900 AS THOSE IN THE ENTRY 1J0L, EXCEPT THAT THE ENSEMBLE OF NMR REMARK 900 MODELS IN 1J0L WAS NOT SUPERIMPOSED BY MISTAKE. REMARK 900 RELATED ID: TTK003001464.1 RELATED DB: TARGETDB
DBREF 1WOT A 1 95 UNP P83814 P83814_THETH 1 95
SEQRES 1 A 98 GLY SER HIS MET ASP LEU GLU THR LEU ARG ALA ARG ARG SEQRES 2 A 98 GLU ALA VAL LEU SER LEU CYS ALA ARG HIS GLY ALA VAL SEQRES 3 A 98 ARG VAL ARG VAL PHE GLY SER VAL ALA ARG GLY GLU ALA SEQRES 4 A 98 ARG GLU ASP SER ASP LEU ASP LEU LEU VAL ALA PHE GLU SEQRES 5 A 98 GLU GLY ARG THR LEU LEU ASP HIS ALA ARG LEU LYS LEU SEQRES 6 A 98 ALA LEU GLU GLY LEU LEU GLY VAL ARG VAL ASP ILE VAL SEQRES 7 A 98 SER GLU ARG GLY LEU ALA PRO ARG LEU ARG GLU GLN VAL SEQRES 8 A 98 LEU ARG GLU ALA ILE PRO LEU
HELIX 1 1 ASP A 2 GLY A 21 1 20 HELIX 2 2 GLY A 29 GLY A 34 1 6 HELIX 3 3 THR A 53 GLY A 69 1 17 HELIX 4 4 ALA A 81 ALA A 92 1 12
SHEET 1 A 4 VAL A 72 SER A 76 0 SHEET 2 A 4 LEU A 42 ALA A 47 1 N LEU A 42 O ASP A 73 SHEET 3 A 4 ARG A 24 VAL A 27 -1 N ARG A 26 O LEU A 45 SHEET 4 A 4 ILE A 93 PRO A 94 -1 O ILE A 93 N VAL A 27
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000