10 20 30 40 50 60 70 80 1WNG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 02-AUG-04 1WNG
TITLE STRUCTURAL STUDY OF PROJECT ID PH0725 FROM PYROCOCCUS TITLE 2 HORIKOSHII OT3
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE DIPHTHINE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DIPHTHAMIDE BIOSYNTHESIS METHYLTRANSFERASE; COMPND 5 EC: 2.1.1.98; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 53953; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS (DE3)-RIL; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET11A
KEYWDS TRANSFERASE, METHYLTRANSFERASE, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI
EXPDTA X-RAY DIFFRACTION
AUTHOR N.KUNISHIMA,K.SHIMIZU,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI)
REVDAT 3 19-JAN-10 1WNG 1 JRNL REVDAT 2 24-FEB-09 1WNG 1 VERSN REVDAT 1 19-JUL-05 1WNG 0
JRNL AUTH S.KISHISHITA,K.SHIMIZU,K.MURAYAMA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA,N.KUNISHIMA JRNL TITL STRUCTURES OF TWO ARCHAEAL DIPHTHINE SYNTHASES: JRNL TITL 2 INSIGHTS INTO THE POST-TRANSLATIONAL MODIFICATION JRNL TITL 3 OF ELONGATION FACTOR 2. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 64 397 2008 JRNL REFN ISSN 0907-4449 JRNL PMID 18391406 JRNL DOI 10.1107/S0907444908000723
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2479061.570 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 45377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2255 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7063 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 365 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4172 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 446 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.22 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.77 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.210 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.870 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.920 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.870 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 57.57 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : SAH.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : SAH.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1WNG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB023778.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45377 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.500 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.07400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.60 REMARK 200 R MERGE FOR SHELL (I) : 0.62400 REMARK 200 R SYM FOR SHELL (I) : 0.60300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, 0.1M MES, REMARK 280 0.01M CO CHLORIDE, PH 6.5, MICROBACH, TEMPERATURE 295K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.67000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 52.45700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 52.45700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.33500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 52.45700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 52.45700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 103.00500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 52.45700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.45700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.33500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 52.45700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.45700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 103.00500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 68.67000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER: A AND B.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -211.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -104.91400 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 104.91400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 137.34000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1503 LIES ON A SPECIAL POSITION.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 146 -0.97 -140.16 REMARK 500 TYR B 11 -53.38 -128.91 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1408 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH A1441 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH A1477 DISTANCE = 6.99 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1301 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1302 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1303 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1304 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1305 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1306 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 1300
DBREF 1WNG A 1 265 UNP O58456 DPHB_PYRHO 1 265 DBREF 1WNG B 1 265 UNP O58456 DPHB_PYRHO 1 265
SEQRES 1 A 265 MET VAL LEU TYR PHE ILE GLY LEU GLY LEU TYR ASP GLU SEQRES 2 A 265 ARG ASP ILE THR VAL LYS GLY LEU GLU ILE ALA LYS LYS SEQRES 3 A 265 CYS ASP TYR VAL PHE ALA GLU PHE TYR THR SER LEU MET SEQRES 4 A 265 ALA GLY THR THR LEU GLY ARG ILE GLN LYS LEU ILE GLY SEQRES 5 A 265 LYS GLU ILE ARG VAL LEU SER ARG GLU ASP VAL GLU LEU SEQRES 6 A 265 ASN PHE GLU ASN ILE VAL LEU PRO LEU ALA LYS GLU ASN SEQRES 7 A 265 ASP VAL ALA PHE LEU THR PRO GLY ASP PRO LEU VAL ALA SEQRES 8 A 265 THR THR HIS ALA GLU LEU ARG ILE ARG ALA LYS ARG ALA SEQRES 9 A 265 GLY VAL GLU SER TYR VAL ILE HIS ALA PRO SER ILE TYR SEQRES 10 A 265 SER ALA VAL GLY ILE THR GLY LEU HIS ILE TYR LYS PHE SEQRES 11 A 265 GLY LYS SER ALA THR VAL ALA TYR PRO GLU GLY ASN TRP SEQRES 12 A 265 PHE PRO THR SER TYR TYR ASP VAL ILE LYS GLU ASN ALA SEQRES 13 A 265 GLU ARG GLY LEU HIS THR LEU LEU PHE LEU ASP ILE LYS SEQRES 14 A 265 ALA GLU LYS ARG MET TYR MET THR ALA ASN GLU ALA MET SEQRES 15 A 265 GLU LEU LEU LEU LYS VAL GLU ASP MET LYS LYS GLY GLY SEQRES 16 A 265 VAL PHE THR ASP ASP THR LEU VAL VAL VAL LEU ALA ARG SEQRES 17 A 265 ALA GLY SER LEU ASN PRO THR ILE ARG ALA GLY TYR VAL SEQRES 18 A 265 LYS ASP LEU ILE ARG GLU ASP PHE GLY ASP PRO PRO HIS SEQRES 19 A 265 ILE LEU ILE VAL PRO GLY LYS LEU HIS ILE VAL GLU ALA SEQRES 20 A 265 GLU TYR LEU VAL GLU ILE ALA GLY ALA PRO ARG GLU ILE SEQRES 21 A 265 LEU ARG VAL ASN VAL SEQRES 1 B 265 MET VAL LEU TYR PHE ILE GLY LEU GLY LEU TYR ASP GLU SEQRES 2 B 265 ARG ASP ILE THR VAL LYS GLY LEU GLU ILE ALA LYS LYS SEQRES 3 B 265 CYS ASP TYR VAL PHE ALA GLU PHE TYR THR SER LEU MET SEQRES 4 B 265 ALA GLY THR THR LEU GLY ARG ILE GLN LYS LEU ILE GLY SEQRES 5 B 265 LYS GLU ILE ARG VAL LEU SER ARG GLU ASP VAL GLU LEU SEQRES 6 B 265 ASN PHE GLU ASN ILE VAL LEU PRO LEU ALA LYS GLU ASN SEQRES 7 B 265 ASP VAL ALA PHE LEU THR PRO GLY ASP PRO LEU VAL ALA SEQRES 8 B 265 THR THR HIS ALA GLU LEU ARG ILE ARG ALA LYS ARG ALA SEQRES 9 B 265 GLY VAL GLU SER TYR VAL ILE HIS ALA PRO SER ILE TYR SEQRES 10 B 265 SER ALA VAL GLY ILE THR GLY LEU HIS ILE TYR LYS PHE SEQRES 11 B 265 GLY LYS SER ALA THR VAL ALA TYR PRO GLU GLY ASN TRP SEQRES 12 B 265 PHE PRO THR SER TYR TYR ASP VAL ILE LYS GLU ASN ALA SEQRES 13 B 265 GLU ARG GLY LEU HIS THR LEU LEU PHE LEU ASP ILE LYS SEQRES 14 B 265 ALA GLU LYS ARG MET TYR MET THR ALA ASN GLU ALA MET SEQRES 15 B 265 GLU LEU LEU LEU LYS VAL GLU ASP MET LYS LYS GLY GLY SEQRES 16 B 265 VAL PHE THR ASP ASP THR LEU VAL VAL VAL LEU ALA ARG SEQRES 17 B 265 ALA GLY SER LEU ASN PRO THR ILE ARG ALA GLY TYR VAL SEQRES 18 B 265 LYS ASP LEU ILE ARG GLU ASP PHE GLY ASP PRO PRO HIS SEQRES 19 B 265 ILE LEU ILE VAL PRO GLY LYS LEU HIS ILE VAL GLU ALA SEQRES 20 B 265 GLU TYR LEU VAL GLU ILE ALA GLY ALA PRO ARG GLU ILE SEQRES 21 B 265 LEU ARG VAL ASN VAL
HET SO4 B1301 5 HET SO4 B1302 5 HET SO4 A1303 5 HET SO4 A1304 5 HET SO4 B1305 5 HET SO4 A1306 5 HET SAH A1300 26
HETNAM SO4 SULFATE ION HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE
FORMUL 3 SO4 6(O4 S 2-) FORMUL 9 SAH C14 H20 N6 O5 S FORMUL 10 HOH *446(H2 O)
HELIX 1 1 ASP A 12 ILE A 16 5 5 HELIX 2 2 THR A 17 LYS A 26 1 10 HELIX 3 3 THR A 43 GLY A 52 1 10 HELIX 4 4 SER A 59 VAL A 71 1 13 HELIX 5 5 VAL A 71 LYS A 76 1 6 HELIX 6 6 ALA A 95 ALA A 104 1 10 HELIX 7 7 SER A 115 VAL A 120 1 6 HELIX 8 8 GLY A 121 GLY A 124 5 4 HELIX 9 9 HIS A 126 PHE A 130 5 5 HELIX 10 10 THR A 146 ARG A 158 1 13 HELIX 11 11 THR A 177 LYS A 193 1 17 HELIX 12 12 VAL A 221 ILE A 225 1 5 HELIX 13 13 HIS A 243 GLY A 255 1 13 HELIX 14 14 PRO A 257 ARG A 262 5 6 HELIX 15 15 ASP B 12 ILE B 16 5 5 HELIX 16 16 THR B 17 CYS B 27 1 11 HELIX 17 17 THR B 43 GLY B 52 1 10 HELIX 18 18 SER B 59 VAL B 71 1 13 HELIX 19 19 VAL B 71 ASN B 78 1 8 HELIX 20 20 THR B 93 ALA B 104 1 12 HELIX 21 21 SER B 115 VAL B 120 1 6 HELIX 22 22 GLY B 121 GLY B 124 5 4 HELIX 23 23 HIS B 126 PHE B 130 5 5 HELIX 24 24 THR B 146 ARG B 158 1 13 HELIX 25 25 THR B 177 LYS B 193 1 17 HELIX 26 26 VAL B 221 ILE B 225 1 5 HELIX 27 27 HIS B 243 GLY B 255 1 13 HELIX 28 28 GLU B 259 ASN B 264 1 6
SHEET 1 A 5 ILE A 55 LEU A 58 0 SHEET 2 A 5 TYR A 29 GLU A 33 1 N ALA A 32 O LEU A 58 SHEET 3 A 5 ASP A 79 THR A 84 1 O ALA A 81 N PHE A 31 SHEET 4 A 5 VAL A 2 GLY A 7 1 N VAL A 2 O VAL A 80 SHEET 5 A 5 GLU A 107 ILE A 111 1 O ILE A 111 N PHE A 5 SHEET 1 B 5 ALA A 134 VAL A 136 0 SHEET 2 B 5 THR A 162 LEU A 166 1 O PHE A 165 N ALA A 134 SHEET 3 B 5 HIS A 234 VAL A 238 -1 O LEU A 236 N LEU A 164 SHEET 4 B 5 LEU A 202 ALA A 207 -1 N VAL A 204 O ILE A 237 SHEET 5 B 5 THR A 215 TYR A 220 -1 O ARG A 217 N VAL A 205 SHEET 1 C 2 ILE A 168 LYS A 169 0 SHEET 2 C 2 MET A 174 TYR A 175 -1 O MET A 174 N LYS A 169 SHEET 1 D 5 ARG B 56 LEU B 58 0 SHEET 2 D 5 TYR B 29 GLU B 33 1 N ALA B 32 O LEU B 58 SHEET 3 D 5 ASP B 79 THR B 84 1 O ALA B 81 N PHE B 31 SHEET 4 D 5 VAL B 2 GLY B 7 1 N TYR B 4 O PHE B 82 SHEET 5 D 5 GLU B 107 ILE B 111 1 O ILE B 111 N PHE B 5 SHEET 1 E 5 ALA B 134 VAL B 136 0 SHEET 2 E 5 THR B 162 LEU B 166 1 O PHE B 165 N ALA B 134 SHEET 3 E 5 HIS B 234 VAL B 238 -1 O LEU B 236 N LEU B 164 SHEET 4 E 5 LEU B 202 ALA B 207 -1 N VAL B 204 O ILE B 237 SHEET 5 E 5 THR B 215 TYR B 220 -1 O ARG B 217 N VAL B 205 SHEET 1 F 2 ILE B 168 LYS B 169 0 SHEET 2 F 2 MET B 174 TYR B 175 -1 O MET B 174 N LYS B 169
CISPEP 1 PRO A 232 PRO A 233 0 0.09 CISPEP 2 PRO B 232 PRO B 233 0 0.16
SITE 1 AC1 6 ARG B 46 HIS B 126 TYR B 128 HOH B1524 SITE 2 AC1 6 HOH B1525 HOH B1526 SITE 1 AC2 8 ARG B 46 LYS B 129 LYS B 241 LEU B 242 SITE 2 AC2 8 HIS B 243 HOH B1518 HOH B1519 HOH B1520 SITE 1 AC3 4 ARG A 60 ALA A 91 THR A 92 THR A 93 SITE 1 AC4 2 SER A 211 LEU A 212 SITE 1 AC5 2 ARG B 258 HOH B1501 SITE 1 AC6 4 PRO A 257 ARG A 258 HOH A1482 HOH A1525 SITE 1 AC7 19 LEU A 10 THR A 36 SER A 37 GLY A 86 SITE 2 AC7 19 ASP A 87 VAL A 90 SER A 115 ILE A 116 SITE 3 AC7 19 PHE A 165 LEU A 166 LEU A 206 ARG A 208 SITE 4 AC7 19 ALA A 209 PRO A 233 HIS A 234 ILE A 235 SITE 5 AC7 19 HOH A1353 HOH A1516 HOH A1517
CRYST1 104.914 104.914 137.340 90.00 90.00 90.00 P 41 21 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009532 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009532 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007281 0.00000