10 20 30 40 50 60 70 80 1WJ6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 29-MAY-04 1WJ6
TITLE SOLUTION STRUCTURE OF RSGI RUH-024, A PB1 DOMAIN IN HUMAN TITLE 2 CDNA, KIAA0049
COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA0049 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PB1 DOMAIN; COMPND 5 SYNONYM: RSGI RUH-024; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA0049; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040114-25; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS NMR, PB1 DOMAIN, PROTEIN BINDING, STRUCTURAL GENOMICS, KEYWDS 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.HAMADA,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1WJ6 1 VERSN REVDAT 1 29-NOV-04 1WJ6 0
JRNL AUTH T.HAMADA,H.HIROTA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-024, A PB1 DOMAIN JRNL TITL 2 IN HUMAN CDNA, KIAA0049 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.8 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1WJ6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-04. REMARK 100 THE RCSB ID CODE IS RCSB023636.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.15MM PB1 DOMAIN U-15N,13C; REMARK 210 20MM TRIS-HCL BUFFER (PH 7.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 21_2, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.8995, REMARK 210 CYANA 1.0.8 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING 3D NMR TECHNIQUES
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 -79.21 -48.17 REMARK 500 1 SER A 6 131.34 76.69 REMARK 500 1 HIS A 9 -67.98 68.38 REMARK 500 1 SER A 10 149.74 -178.45 REMARK 500 1 GLU A 12 165.76 76.05 REMARK 500 1 GLN A 14 101.45 -35.11 REMARK 500 1 LYS A 22 -93.31 64.02 REMARK 500 1 LYS A 46 -70.26 -59.31 REMARK 500 1 ASP A 50 82.14 53.84 REMARK 500 1 ILE A 56 152.17 -38.59 REMARK 500 1 ASP A 60 -155.21 -82.95 REMARK 500 1 ASN A 86 33.83 71.53 REMARK 500 1 SER A 96 126.66 -178.92 REMARK 500 1 SER A 100 155.70 63.82 REMARK 500 2 SER A 2 -58.49 -171.46 REMARK 500 2 SER A 5 159.29 -48.08 REMARK 500 2 SER A 6 133.18 66.87 REMARK 500 2 SER A 10 -58.04 -161.92 REMARK 500 2 MET A 11 154.69 -38.37 REMARK 500 2 GLN A 14 101.05 50.22 REMARK 500 2 LYS A 22 -92.45 67.83 REMARK 500 2 THR A 36 171.34 -55.63 REMARK 500 2 LYS A 46 -70.38 -47.31 REMARK 500 2 ASP A 50 80.36 41.79 REMARK 500 2 ILE A 56 150.95 -45.17 REMARK 500 2 ASP A 60 -155.18 -77.05 REMARK 500 2 GLU A 94 141.35 -39.96 REMARK 500 2 SER A 96 88.75 39.72 REMARK 500 2 SER A 99 111.64 -174.21 REMARK 500 3 SER A 5 170.38 -56.31 REMARK 500 3 GLN A 14 100.75 49.34 REMARK 500 3 LYS A 22 -92.61 62.35 REMARK 500 3 LYS A 46 -70.46 -51.41 REMARK 500 3 ASP A 50 54.82 82.10 REMARK 500 3 ILE A 56 152.98 -39.31 REMARK 500 3 ASP A 60 -155.67 -81.68 REMARK 500 3 SER A 96 77.66 47.56 REMARK 500 4 SER A 2 -54.49 179.69 REMARK 500 4 SER A 3 94.04 61.11 REMARK 500 4 SER A 5 112.90 -178.33 REMARK 500 4 MET A 11 111.68 63.74 REMARK 500 4 GLN A 14 100.41 -36.58 REMARK 500 4 LYS A 22 -92.47 64.76 REMARK 500 4 THR A 36 165.37 -47.28 REMARK 500 4 ILE A 41 -61.53 -95.39 REMARK 500 4 ILE A 56 154.92 -39.25 REMARK 500 4 ASP A 60 -155.93 -78.76 REMARK 500 4 SER A 96 -178.08 -69.14 REMARK 500 4 SER A 99 -59.76 74.05 REMARK 500 4 SER A 100 158.89 177.91 REMARK 500 5 SER A 2 89.25 57.80 REMARK 500 5 SER A 3 129.82 -175.28 REMARK 500 5 SER A 6 -57.31 -130.02 REMARK 500 5 GLU A 12 149.13 175.44 REMARK 500 5 GLN A 14 101.42 -37.59 REMARK 500 5 LYS A 22 -95.29 63.63 REMARK 500 5 ASP A 50 44.58 82.27 REMARK 500 5 ILE A 56 156.37 -39.00 REMARK 500 5 ASP A 60 -155.42 -79.80 REMARK 500 5 GLU A 94 152.61 -42.82 REMARK 500 5 SER A 99 -66.33 -93.89 REMARK 500 6 SER A 5 113.24 -162.54 REMARK 500 6 HIS A 9 -51.78 -178.14 REMARK 500 6 GLN A 14 101.78 -37.19 REMARK 500 6 LYS A 22 -94.38 62.53 REMARK 500 6 THR A 36 170.61 -49.65 REMARK 500 6 ASP A 50 40.29 83.12 REMARK 500 6 ILE A 56 154.01 -42.18 REMARK 500 6 ASP A 60 -155.82 -80.23 REMARK 500 6 SER A 96 81.36 46.38 REMARK 500 6 SER A 99 161.35 59.74 REMARK 500 6 SER A 100 135.93 63.42 REMARK 500 7 SER A 3 93.17 57.18 REMARK 500 7 MET A 11 142.45 63.07 REMARK 500 7 GLU A 12 132.18 167.95 REMARK 500 7 GLN A 14 100.35 -37.85 REMARK 500 7 LYS A 22 -94.35 66.09 REMARK 500 7 ASP A 50 82.06 43.60 REMARK 500 7 ILE A 56 156.37 -39.39 REMARK 500 7 ASP A 60 -156.21 -80.96 REMARK 500 7 SER A 99 88.10 56.93 REMARK 500 7 SER A 100 159.42 67.06 REMARK 500 8 SER A 10 151.72 66.01 REMARK 500 8 MET A 11 -179.70 -67.18 REMARK 500 8 GLN A 14 101.50 -37.23 REMARK 500 8 LYS A 22 -93.14 60.94 REMARK 500 8 ASP A 50 54.15 82.35 REMARK 500 8 ILE A 56 154.88 -38.86 REMARK 500 8 ASP A 60 -152.72 -83.47 REMARK 500 8 SER A 96 174.52 171.41 REMARK 500 8 SER A 99 178.93 54.49 REMARK 500 8 SER A 100 101.81 -168.07 REMARK 500 9 SER A 3 142.85 -179.03 REMARK 500 9 SER A 5 132.44 -177.89 REMARK 500 9 MET A 11 121.98 60.52 REMARK 500 9 GLN A 14 102.03 -36.78 REMARK 500 9 LYS A 22 -92.46 49.68 REMARK 500 9 LYS A 46 -70.30 -55.95 REMARK 500 9 ASP A 50 71.34 50.25 REMARK 500 9 ILE A 56 157.61 -41.97 REMARK 500 9 ASP A 60 -156.64 -78.14 REMARK 500 9 GLU A 94 148.23 -39.05 REMARK 500 9 SER A 99 127.75 65.00 REMARK 500 9 SER A 100 90.47 39.93 REMARK 500 10 SER A 6 -176.11 -174.94 REMARK 500 10 HIS A 9 166.07 67.18 REMARK 500 10 MET A 11 176.01 -59.09 REMARK 500 10 GLN A 14 100.20 -37.37 REMARK 500 10 LYS A 22 -90.48 65.46 REMARK 500 10 LYS A 46 -70.35 -52.42 REMARK 500 10 ASP A 50 57.70 80.60 REMARK 500 10 ILE A 56 154.41 -38.17 REMARK 500 11 MET A 11 98.16 62.06 REMARK 500 11 GLN A 14 121.97 -37.75 REMARK 500 11 LYS A 22 -93.01 66.55 REMARK 500 11 ASN A 35 -56.85 -120.85 REMARK 500 11 THR A 36 178.05 -52.89 REMARK 500 11 LYS A 46 -70.13 -57.40 REMARK 500 11 ASP A 50 84.07 42.18 REMARK 500 11 ILE A 56 152.26 -38.44 REMARK 500 11 SER A 96 -55.86 -161.52 REMARK 500 11 SER A 99 -57.20 -137.31 REMARK 500 12 SER A 2 132.97 -176.20 REMARK 500 12 GLN A 14 101.68 -37.01 REMARK 500 12 LYS A 22 -91.16 58.94 REMARK 500 12 ILE A 56 152.53 -37.37 REMARK 500 12 ASP A 60 -157.09 -79.66 REMARK 500 13 SER A 2 88.32 -167.57 REMARK 500 13 SER A 5 98.13 -69.69 REMARK 500 13 SER A 6 116.18 -165.48 REMARK 500 13 HIS A 9 170.53 -46.71 REMARK 500 13 SER A 10 -57.93 -171.40 REMARK 500 13 MET A 11 150.60 -47.88 REMARK 500 13 GLU A 12 133.07 170.59 REMARK 500 13 GLN A 14 100.55 -37.36 REMARK 500 13 LYS A 22 -94.22 66.52 REMARK 500 13 THR A 36 161.51 -48.19 REMARK 500 13 LYS A 46 -70.60 -56.39 REMARK 500 13 ASP A 50 80.84 46.40 REMARK 500 13 ILE A 56 152.28 -42.81 REMARK 500 13 ASP A 60 -155.47 -81.88 REMARK 500 13 ASN A 86 33.64 70.41 REMARK 500 13 SER A 96 86.84 39.61 REMARK 500 14 SER A 5 93.65 64.17 REMARK 500 14 SER A 10 173.70 -59.46 REMARK 500 14 GLN A 14 100.71 -38.34 REMARK 500 14 LYS A 22 -91.51 52.92 REMARK 500 14 LYS A 46 -70.33 -52.83 REMARK 500 14 ASP A 50 77.79 44.63 REMARK 500 14 ILE A 56 154.15 -38.29 REMARK 500 14 ASP A 60 -156.00 -81.57 REMARK 500 14 SER A 99 -51.95 -144.88 REMARK 500 15 SER A 2 -58.52 -166.88 REMARK 500 15 SER A 3 98.22 52.91 REMARK 500 15 SER A 5 110.92 -177.26 REMARK 500 15 SER A 6 85.30 55.08 REMARK 500 15 HIS A 9 101.91 55.86 REMARK 500 15 GLN A 14 101.57 -37.01 REMARK 500 15 LYS A 22 -92.34 50.30 REMARK 500 15 LYS A 46 -70.93 -51.40 REMARK 500 15 ASP A 50 55.11 84.01 REMARK 500 15 ILE A 56 149.99 -36.80 REMARK 500 15 ASP A 60 -155.22 -82.24 REMARK 500 15 SER A 99 93.13 -167.07 REMARK 500 15 SER A 100 95.57 48.20 REMARK 500 16 SER A 6 110.59 57.76 REMARK 500 16 GLU A 12 165.05 177.49 REMARK 500 16 GLN A 14 100.67 -37.21 REMARK 500 16 LYS A 22 -91.91 51.59 REMARK 500 16 ILE A 56 155.91 -39.15 REMARK 500 16 ASP A 60 -156.13 -80.53 REMARK 500 17 HIS A 9 143.92 -178.70 REMARK 500 17 GLU A 12 140.75 -178.84 REMARK 500 17 GLN A 14 101.00 -37.17 REMARK 500 17 LYS A 22 -91.78 63.87 REMARK 500 17 ILE A 56 149.84 -37.14 REMARK 500 17 ASN A 86 33.91 71.02 REMARK 500 17 SER A 96 -63.12 -134.55 REMARK 500 18 SER A 2 102.83 -174.49 REMARK 500 18 SER A 10 95.45 47.59 REMARK 500 18 GLN A 14 101.65 -37.69 REMARK 500 18 LYS A 22 -94.21 63.23 REMARK 500 18 ASP A 50 80.26 38.20 REMARK 500 18 ILE A 56 151.34 -39.66 REMARK 500 18 SER A 99 93.77 45.50 REMARK 500 19 SER A 6 -59.13 74.47 REMARK 500 19 HIS A 9 -62.39 -171.42 REMARK 500 19 GLN A 14 101.14 -37.26 REMARK 500 19 LYS A 22 -93.60 66.21 REMARK 500 19 THR A 36 177.45 -50.53 REMARK 500 19 LYS A 46 -70.91 -42.71 REMARK 500 19 ASP A 50 84.98 44.27 REMARK 500 19 ILE A 56 158.37 -41.23 REMARK 500 19 ASN A 63 5.17 82.83 REMARK 500 19 GLU A 94 147.97 -38.08 REMARK 500 20 SER A 3 127.63 178.85 REMARK 500 20 SER A 5 -58.70 -134.91 REMARK 500 20 SER A 6 84.52 50.42 REMARK 500 20 GLN A 14 103.45 -36.38 REMARK 500 20 LYS A 22 -90.69 63.65 REMARK 500 20 LYS A 46 -70.90 -51.41 REMARK 500 20 ILE A 56 158.45 -44.70 REMARK 500 20 GLU A 94 148.83 -36.59 REMARK 500 20 SER A 100 -58.11 -157.27 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002000046.1 RELATED DB: TARGETDB
DBREF 1WJ6 A 8 95 UNP Q14596 NBR1_HUMAN 1 88
SEQADV 1WJ6 GLY A 1 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 SER A 2 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 SER A 3 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 GLY A 4 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 SER A 5 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 SER A 6 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 GLY A 7 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 SER A 96 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 GLY A 97 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 PRO A 98 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 SER A 99 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 SER A 100 UNP Q14596 CLONING ARTIFACT SEQADV 1WJ6 GLY A 101 UNP Q14596 CLONING ARTIFACT
SEQRES 1 A 101 GLY SER SER GLY SER SER GLY PRO HIS SER MET GLU PRO SEQRES 2 A 101 GLN VAL THR LEU ASN VAL THR PHE LYS ASN GLU ILE GLN SEQRES 3 A 101 SER PHE LEU VAL SER ASP PRO GLU ASN THR THR TRP ALA SEQRES 4 A 101 ASP ILE GLU ALA MET VAL LYS VAL SER PHE ASP LEU ASN SEQRES 5 A 101 THR ILE GLN ILE LYS TYR LEU ASP GLU GLU ASN GLU GLU SEQRES 6 A 101 VAL SER ILE ASN SER GLN GLY GLU TYR GLU GLU ALA LEU SEQRES 7 A 101 LYS MET ALA VAL LYS GLN GLY ASN GLN LEU GLN MET GLN SEQRES 8 A 101 VAL HIS GLU GLY SER GLY PRO SER SER GLY
HELIX 1 1 THR A 37 ASP A 50 1 14 HELIX 2 2 SER A 70 GLY A 85 1 16
SHEET 1 A 5 GLU A 24 VAL A 30 0 SHEET 2 A 5 VAL A 15 PHE A 21 -1 N PHE A 21 O GLU A 24 SHEET 3 A 5 GLN A 87 GLN A 91 1 O MET A 90 N ASN A 18 SHEET 4 A 5 LYS A 57 LEU A 59 -1 N LYS A 57 O GLN A 91 SHEET 5 A 5 GLU A 65 VAL A 66 -1 O VAL A 66 N TYR A 58
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000