10 20 30 40 50 60 70 80 1WHS - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SERINE CARBOXYPEPTIDASE 07-MAR-94 1WHS
TITLE STRUCTURE OF THE COMPLEX OF L-BENZYLSUCCINATE WITH WHEAT SERINE TITLE 2 CARBOXYPEPTIDASE II AT 2.0 ANGSTROMS RESOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE CARBOXYPEPTIDASE II; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.16.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SERINE CARBOXYPEPTIDASE II; COMPND 8 CHAIN: B; COMPND 9 EC: 3.4.16.1; COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: COMMON WHEAT; SOURCE 4 ORGANISM_TAXID: 4565; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 7 ORGANISM_COMMON: COMMON WHEAT; SOURCE 8 ORGANISM_TAXID: 4565
KEYWDS SERINE CARBOXYPEPTIDASE
EXPDTA X-RAY DIFFRACTION
AUTHOR T.L.BULLOCK,S.J.REMINGTON
REVDAT 4 13-JUL-11 1WHS 1 VERSN REVDAT 3 25-AUG-09 1WHS 1 SOURCE REVDAT 2 24-FEB-09 1WHS 1 VERSN REVDAT 1 22-JUN-94 1WHS 0
JRNL AUTH T.L.BULLOCK,B.BRANCHAUD,S.J.REMINGTON JRNL TITL STRUCTURE OF THE COMPLEX OF L-BENZYLSUCCINATE WITH WHEAT JRNL TITL 2 SERINE CARBOXYPEPTIDASE II AT 2.0-A RESOLUTION. JRNL REF BIOCHEMISTRY V. 33 11127 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 7727364 JRNL DOI 10.1021/BI00203A009
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.-I.LIAO,S.J.REMINGTON REMARK 1 TITL STRUCTURE OF WHEAT SERINE CARBOXYPEPTIDASE II AT 3.5 REMARK 1 TITL 2 ANGSTROMS RESOLUTION REMARK 1 REF J.BIOL.CHEM. V. 265 6528 1990 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.P.WILSON,D.-I.LIAO,T.BULLOCK,S.J.REMINGTON,K.BREDDAM REMARK 1 TITL CRYSTALLIZATION OF SERINE CARBOXYPEPTIDASES REMARK 1 REF J.MOL.BIOL. V. 211 301 1990 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH K.BREDDAM,S.B.SORENSEN,I.SVENDSEN REMARK 1 TITL PRIMARY STRUCTURE AND ENZYMATIC PROPERTIES OF REMARK 1 TITL 2 CARBOXYPEPTIDASE II FROM WHEAT BRAN REMARK 1 REF CARLSBERG RES.COMMUN. V. 52 297 1987 REMARK 1 REFN ISSN 0105-1938
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 29338 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3206 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 383 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.012 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.300 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1WHS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.40000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.80000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.20000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.80000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 156.60000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.80000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.80000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.20000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.80000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.80000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 156.60000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 104.40000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 95.60000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 95.60000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 104.40000
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 24 CD OE1 OE2 REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 163 CD CE NZ REMARK 470 ARG B 282 CD NE CZ NH1 NH2 REMARK 470 VAL B 292 CB CG1 CG2 REMARK 470 ASP B 375 CG OD1 OD2 REMARK 470 GLN B 375A CG CD OE1 NE2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C1 FUC A 1132 C3 NAG A 1133 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 39 CD GLU A 39 OE2 0.073 REMARK 500 GLU A 81 CD GLU A 81 OE1 0.082 REMARK 500 GLU A 128 CD GLU A 128 OE2 0.070 REMARK 500 GLU A 154 CD GLU A 154 OE2 0.069 REMARK 500 GLU A 208 CD GLU A 208 OE1 0.081 REMARK 500 GLU B 376 CD GLU B 376 OE1 0.075 REMARK 500 GLU B 398 CD GLU B 398 OE2 0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 0 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 3 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ASP A 11 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 15 CB - CG - OD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ASP A 23A CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ASP A 40 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 TYR A 60 CB - CG - CD1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP A 94 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 94 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 114 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 TYR A 151 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 TYR A 151 CB - CG - CD1 ANGL. DEV. = 5.3 DEGREES REMARK 500 MET A 173 CG - SD - CE ANGL. DEV. = -10.5 DEGREES REMARK 500 ASP A 180 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 181 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 181 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP A 200 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP A 201 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP A 227 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP A 227 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TYR A 242 CB - CG - CD1 ANGL. DEV. = -3.9 DEGREES REMARK 500 ASP B 266 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 266 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP B 283 CB - CG - OD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP B 308C CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG B 329 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP B 336 CB - CG - OD1 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP B 336 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 338 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 405 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 8 156.76 -48.47 REMARK 500 TYR A 60 -81.82 -85.05 REMARK 500 GLU A 65 -111.02 -133.51 REMARK 500 TYR A 137 -14.15 72.58 REMARK 500 SER A 146 -126.51 61.65 REMARK 500 ALA A 148 0.94 -68.78 REMARK 500 SER A 240 91.65 -160.90 REMARK 500 ASN A 247 42.26 -93.16 REMARK 500 MET B 296 97.14 -60.21 REMARK 500 ASN B 297 38.49 -93.40 REMARK 500 HIS B 308B -123.45 -98.73 REMARK 500 ALA B 309 77.94 -169.75 REMARK 500 PRO B 310 150.99 -36.48 REMARK 500 TRP B 369 120.42 -38.82 REMARK 500 ASP B 375 -102.49 74.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 CYS A 56 24.6 L L OUTSIDE RANGE REMARK 500 SER A 107 23.5 L L OUTSIDE RANGE REMARK 500 SER A 146 24.4 L L OUTSIDE RANGE REMARK 500 ILE A 197 20.2 L L OUTSIDE RANGE REMARK 500 LEU A 211 22.8 L L OUTSIDE RANGE REMARK 500 ILE A 248 24.6 L L OUTSIDE RANGE REMARK 500 ARG B 282 23.9 L L OUTSIDE RANGE REMARK 500 VAL B 284 23.9 L L OUTSIDE RANGE REMARK 500 HIS B 308B 23.8 L L OUTSIDE RANGE REMARK 500 ASP B 336 17.4 L L OUTSIDE RANGE REMARK 500 GLN B 406 24.8 L L OUTSIDE RANGE REMARK 500 GLN B 423 -22.3 L D WRONG HAND REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1162 DISTANCE = 5.61 ANGSTROMS REMARK 525 HOH A1220 DISTANCE = 5.06 ANGSTROMS REMARK 525 HOH A1265 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH A1280 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH B2965 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH B3052 DISTANCE = 5.27 ANGSTROMS
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 1131
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ACT REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 1131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FUC A 1132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 1133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 1134 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 2911 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 2912 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 460 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 461
DBREF 1WHS A -4 248 UNP P08819 CBP2_WHEAT 6 260 DBREF 1WHS B 264 423 UNP P08819 CBP2_WHEAT 266 418
SEQRES 1 A 255 HIS ALA ALA ASP ARG ILE ALA ARG LEU PRO GLY GLN PRO SEQRES 2 A 255 ALA VAL ASP PHE ASP MET TYR SER GLY TYR ILE THR VAL SEQRES 3 A 255 ASP GLU GLY ALA GLY ARG SER LEU PHE TYR LEU LEU GLN SEQRES 4 A 255 GLU ALA PRO GLU ASP ALA GLN PRO ALA PRO LEU VAL LEU SEQRES 5 A 255 TRP LEU ASN GLY GLY PRO GLY CYS SER SER VAL ALA TYR SEQRES 6 A 255 GLY ALA SER GLU GLU LEU GLY ALA PHE ARG VAL LYS PRO SEQRES 7 A 255 ARG GLY ALA GLY LEU VAL LEU ASN GLU TYR ARG TRP ASN SEQRES 8 A 255 LYS VAL ALA ASN VAL LEU PHE LEU ASP SER PRO ALA GLY SEQRES 9 A 255 VAL GLY PHE SER TYR THR ASN THR SER SER ASP ILE TYR SEQRES 10 A 255 THR SER GLY ASP ASN ARG THR ALA HIS ASP SER TYR ALA SEQRES 11 A 255 PHE LEU ALA LYS TRP PHE GLU ARG PHE PRO HIS TYR LYS SEQRES 12 A 255 TYR ARG ASP PHE TYR ILE ALA GLY GLU SER TYR ALA GLY SEQRES 13 A 255 HIS TYR VAL PRO GLU LEU SER GLN LEU VAL HIS ARG SER SEQRES 14 A 255 LYS ASN PRO VAL ILE ASN LEU LYS GLY PHE MET VAL GLY SEQRES 15 A 255 ASN GLY LEU ILE ASP ASP TYR HIS ASP TYR VAL GLY THR SEQRES 16 A 255 PHE GLU PHE TRP TRP ASN HIS GLY ILE VAL SER ASP ASP SEQRES 17 A 255 THR TYR ARG ARG LEU LYS GLU ALA CYS LEU HIS ASP SER SEQRES 18 A 255 PHE ILE HIS PRO SER PRO ALA CYS ASP ALA ALA THR ASP SEQRES 19 A 255 VAL ALA THR ALA GLU GLN GLY ASN ILE ASP MET TYR SER SEQRES 20 A 255 LEU TYR THR PRO VAL CYS ASN ILE SEQRES 1 B 153 SER TYR ASP PRO CYS THR GLU ARG TYR SER THR ALA TYR SEQRES 2 B 153 TYR ASN ARG ARG ASP VAL GLN MET ALA LEU HIS ALA ASN SEQRES 3 B 153 VAL THR GLY ALA MET ASN TYR THR TRP ALA THR CYS SER SEQRES 4 B 153 ASP THR ILE ASN THR HIS TRP HIS ASP ALA PRO ARG SER SEQRES 5 B 153 MET LEU PRO ILE TYR ARG GLU LEU ILE ALA ALA GLY LEU SEQRES 6 B 153 ARG ILE TRP VAL PHE SER GLY ASP THR ASP ALA VAL VAL SEQRES 7 B 153 PRO LEU THR ALA THR ARG TYR SER ILE GLY ALA LEU GLY SEQRES 8 B 153 LEU PRO THR THR THR SER TRP TYR PRO TRP TYR ASP ASP SEQRES 9 B 153 GLN GLU VAL GLY GLY TRP SER GLN VAL TYR LYS GLY LEU SEQRES 10 B 153 THR LEU VAL SER VAL ARG GLY ALA GLY HIS GLU VAL PRO SEQRES 11 B 153 LEU HIS ARG PRO ARG GLN ALA LEU VAL LEU PHE GLN TYR SEQRES 12 B 153 PHE LEU GLN GLY LYS PRO MET PRO GLY GLN
HET NAG A1131 14 HET FUC A1132 10 HET NAG A1133 14 HET NAG A1134 14 HET NAG B2911 14 HET NAG B2912 14 HET GOL A 450 6 HET ACY A 460 4 HET ACY B 461 4
HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM FUC ALPHA-L-FUCOSE HETNAM GOL GLYCEROL HETNAM ACY ACETIC ACID
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 3 NAG 5(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 6 GOL C3 H8 O3 FORMUL 7 ACY 2(C2 H4 O2) FORMUL 9 HOH *383(H2 O)
HELIX 1 H1 PRO A 38 GLN A 42 5 5 HELIX 2 H2 GLY A 61 GLU A 64 1 4 HELIX 3 H3 ARG A 83 VAL A 87 5 5 HELIX 4 H4 ASP A 112C ARG A 129 1 18 HELIX 5 H5 ALA A 148 ARG A 161 1 14 HELIX 6 H6 ASP A 181 ASN A 194 1 14 HELIX 7 H7 ASP A 200 CYS A 210 1 11 HELIX 8 H8 PRO A 220 GLN A 233 1 14 HELIX 9 H9 THR B 271 TYR B 279 1 9 HELIX 10 H10 ARG B 282 LEU B 288 1 7 HELIX 11 H11 ASP B 303B THR B 307 1 5 HELIX 12 H12 LEU B 314 ILE B 321 1 8 HELIX 13 H13 LEU B 343 GLY B 351 1 9 HELIX 14 H14 VAL B 399 HIS B 402 1 4 HELIX 15 H15 PRO B 404 GLN B 416 1 13
SHEET 1 S111 ASP A -1 ILE A 1 0 SHEET 2 S111 MET A 16 ASP A 23A-1 SHEET 3 S111 ARG A 28 LEU A 34 -1 SHEET 4 S111 ALA A 88 PHE A 92 -1 SHEET 5 S111 LEU A 46 LEU A 50 1 SHEET 6 S111 ASP A 139 GLU A 145 1 SHEET 7 S111 ASN A 168 GLY A 175 1 SHEET 8 S111 ARG B 329 GLY B 335 1 SHEET 9 S111 LEU B 387 VAL B 392 1 SHEET 10 S111 GLU B 376 TYR B 384 -1 SHEET 11 S111 THR B 366 TYR B 373 -1 SHEET 1 S2 2 PHE A 69 VAL A 71 0 SHEET 2 S2 2 LEU A 77 LEU A 79 -1 SHEET 1 S3 1 SER A 102 ASN A 105 0
SSBOND 1 CYS A 56 CYS B 303 1555 1555 2.04 SSBOND 2 CYS A 210 CYS A 222 1555 1555 2.05 SSBOND 3 CYS A 246 CYS B 268 1555 1555 2.01
LINK C1 FUC A1132 O3 NAG A1133 1555 1555 1.38 LINK O4 NAG A1133 C1 NAG A1134 1555 1555 1.41 LINK O4 NAG B2911 C1 NAG B2912 1555 1555 1.40 LINK C4 NAG A1133 C1 NAG A1134 1555 1555 1.83 LINK C4 NAG A1133 O5 NAG A1134 1555 1555 1.80 LINK C4 NAG B2911 C1 NAG B2912 1555 1555 1.52
CISPEP 1 GLN A 42 PRO A 43 0 0.33 CISPEP 2 GLY A 53 PRO A 54 0 -4.89 CISPEP 3 SER A 95 PRO A 96 0 1.25
SITE 1 ACT 4 ASP B 338 HIS B 397 SER A 146 GLU A 145 SITE 1 AC1 5 ASN A 113 HIS A 117 HOH A1342 HOH A1358 SITE 2 AC1 5 HOH A1359 SITE 1 AC2 4 TYR A 103 NAG A1133 NAG A1134 THR B 293 SITE 1 AC3 6 THR A 22 GLY A 27 TYR A 103 ASN A 105 SITE 2 AC3 6 FUC A1132 NAG A1134 SITE 1 AC4 3 FUC A1132 NAG A1133 THR B 293 SITE 1 AC5 10 ASN B 280 ARG B 282 GLN B 285 ASN B 291 SITE 2 AC5 10 GLY B 294 MET B 296 TYR B 298 THR B 299 SITE 3 AC5 10 TRP B 300 NAG B2912 SITE 1 AC6 3 ASN B 280 NAG B2911 HOH B3031 SITE 1 AC7 7 PHE A 14 ASP A 15 GLU A 36 ALA A 37 SITE 2 AC7 7 GLU A 39 GLN A 42 HIS A 212 SITE 1 AC8 4 ASN A 51 GLY A 52 GLU A 145 SER A 146 SITE 1 AC9 6 ASN A 235 THR A 243 PRO A 244 GLU B 376 SITE 2 AC9 6 VAL B 377 ARG B 393
CRYST1 95.600 95.600 208.800 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010460 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010460 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004789 0.00000