1WG4 - Header Asymmetric Unit

HEADER RNA BINDING PROTEIN 27-MAY-04 1WG4

TITLE SOLUTION STRUCTURE OF RRM DOMAIN IN PROTEIN BAB31986

COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN (RIKEN CDNA 6030486K23); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM DOMAIN; COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 6030486K23; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P031208-04; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS

KEYWDS NMR, STRUCTURAL GENOMICS, RRM DOMAIN, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA BINDING PROTEIN

EXPDTA SOLUTION NMR

NUMMDL 20

AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)

REVDAT 2 24-FEB-09 1WG4 1 VERSN REVDAT 1 27-NOV-04 1WG4 0

JRNL AUTH F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RRM DOMAIN IN PROTEIN JRNL TITL 2 BAB31986 JRNL REF TO BE PUBLISHED JRNL REFN

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.8 REMARK 3 AUTHORS : GUENTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1WG4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-JUN-04. REMARK 100 THE RCSB ID CODE IS RCSB023543.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8MM U-15,13C; 20MM D-TRIS- REMARK 210 HCL(PH 7.0); 100MM NACL; 1MM D REMARK 210 -DTT; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.863, CYANA 1.0.8 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -56.92 -152.73 REMARK 500 1 SER A 3 131.75 62.80 REMARK 500 1 ALA A 39 -81.95 -64.82 REMARK 500 1 LYS A 49 -171.98 -60.99 REMARK 500 1 ASP A 50 -59.68 73.46 REMARK 500 1 ASP A 71 88.61 17.96 REMARK 500 1 ASP A 72 106.88 63.96 REMARK 500 1 GLU A 81 165.24 -43.46 REMARK 500 1 SER A 92 95.26 -177.24 REMARK 500 1 SER A 93 79.63 40.34 REMARK 500 1 SER A 96 -59.62 71.74 REMARK 500 2 SER A 5 95.63 59.60 REMARK 500 2 SER A 6 85.84 61.94 REMARK 500 2 ARG A 12 33.41 -142.75 REMARK 500 2 GLN A 30 -71.62 -48.54 REMARK 500 2 ALA A 39 -80.45 -60.82 REMARK 500 2 LYS A 49 -172.91 -62.12 REMARK 500 2 ASP A 50 -58.94 74.16 REMARK 500 2 ASP A 71 90.12 18.46 REMARK 500 2 ASP A 72 106.47 60.86 REMARK 500 2 GLU A 81 139.32 -38.81 REMARK 500 2 ARG A 91 166.68 176.02 REMARK 500 2 SER A 93 126.34 64.19 REMARK 500 2 SER A 96 91.27 41.09 REMARK 500 3 SER A 2 -58.49 -126.57 REMARK 500 3 SER A 5 -57.34 -124.98 REMARK 500 3 THR A 11 98.19 -68.92 REMARK 500 3 SER A 14 153.84 -42.33 REMARK 500 3 ASP A 15 70.35 -118.13 REMARK 500 3 GLN A 30 -72.37 -48.79 REMARK 500 3 ALA A 39 -81.99 -63.88 REMARK 500 3 ASP A 50 -58.04 79.53 REMARK 500 3 ASP A 71 80.77 15.04 REMARK 500 3 ASP A 72 100.86 75.04 REMARK 500 3 SER A 93 81.58 64.98 REMARK 500 4 SER A 2 -60.49 71.33 REMARK 500 4 THR A 11 107.61 63.28 REMARK 500 4 ARG A 12 46.51 -141.59 REMARK 500 4 ASP A 15 58.30 -107.12 REMARK 500 4 GLN A 30 -73.21 -50.38 REMARK 500 4 ALA A 39 -83.15 -63.35 REMARK 500 4 ASP A 50 -57.89 75.03 REMARK 500 4 ASP A 71 86.29 15.97 REMARK 500 4 ASP A 72 104.49 68.77 REMARK 500 4 GLU A 81 156.06 -49.12 REMARK 500 4 SER A 93 155.73 -42.77 REMARK 500 4 SER A 96 78.80 66.62 REMARK 500 4 SER A 97 131.20 -179.05 REMARK 500 5 SER A 2 102.23 59.07 REMARK 500 5 SER A 6 117.59 -169.94 REMARK 500 5 ARG A 12 70.71 55.91 REMARK 500 5 SER A 14 176.25 -49.73 REMARK 500 5 GLN A 30 -73.40 -45.95 REMARK 500 5 ALA A 39 -82.71 -61.19 REMARK 500 5 ASP A 50 -37.77 88.02 REMARK 500 5 ASP A 71 76.85 15.91 REMARK 500 5 ASP A 72 102.63 78.82 REMARK 500 5 GLU A 81 159.31 -41.89 REMARK 500 5 ARG A 91 50.10 -177.84 REMARK 500 6 SER A 5 88.01 -156.38 REMARK 500 6 SER A 6 109.88 61.11 REMARK 500 6 SER A 14 127.10 -38.97 REMARK 500 6 PHE A 16 100.86 -162.48 REMARK 500 6 GLN A 30 -70.74 -47.08 REMARK 500 6 ASP A 34 -38.00 -39.45 REMARK 500 6 ARG A 37 -28.23 -39.58 REMARK 500 6 ALA A 39 -81.24 -62.20 REMARK 500 6 LYS A 49 -178.37 -63.31 REMARK 500 6 ASP A 50 -58.85 74.22 REMARK 500 6 ASP A 71 91.43 17.00 REMARK 500 6 ASP A 72 106.29 61.74 REMARK 500 6 SER A 96 -57.79 -172.90 REMARK 500 7 SER A 3 147.06 -39.39 REMARK 500 7 ARG A 12 45.63 -149.97 REMARK 500 7 SER A 14 -177.16 50.04 REMARK 500 7 ASP A 15 62.75 -165.06 REMARK 500 7 GLN A 30 -73.81 -49.68 REMARK 500 7 ALA A 39 -75.02 -59.66 REMARK 500 7 ASP A 50 -42.20 87.05 REMARK 500 7 ASP A 71 89.86 18.14 REMARK 500 7 ASP A 72 102.35 61.48 REMARK 500 7 GLU A 81 151.45 -41.33 REMARK 500 7 ARG A 91 120.27 -175.66 REMARK 500 7 SER A 93 156.60 61.53 REMARK 500 7 SER A 97 -58.49 -132.61 REMARK 500 8 SER A 2 -58.59 -155.29 REMARK 500 8 SER A 6 164.47 57.76 REMARK 500 8 ARG A 12 49.64 -86.40 REMARK 500 8 ASP A 15 68.43 -116.04 REMARK 500 8 GLN A 30 -73.21 -50.95 REMARK 500 8 ASP A 34 -29.66 -39.86 REMARK 500 8 ALA A 39 -81.77 -66.38 REMARK 500 8 ASP A 50 -59.44 72.83 REMARK 500 8 ASP A 71 106.03 -9.49 REMARK 500 8 ASP A 72 103.13 60.84 REMARK 500 8 PRO A 89 -168.56 -75.01 REMARK 500 8 ARG A 91 92.45 67.60 REMARK 500 8 SER A 92 -60.96 -123.50 REMARK 500 9 SER A 2 -74.29 68.86 REMARK 500 9 SER A 3 96.58 51.92 REMARK 500 9 THR A 11 94.65 58.98 REMARK 500 9 SER A 14 150.81 -43.59 REMARK 500 9 ASP A 15 60.21 -108.76 REMARK 500 9 ALA A 39 -80.89 -66.30 REMARK 500 9 ASP A 50 -58.14 80.48 REMARK 500 9 ASP A 71 76.70 16.69 REMARK 500 9 ASP A 72 104.49 77.23 REMARK 500 9 SER A 92 -68.01 -159.64 REMARK 500 9 SER A 93 77.16 55.05 REMARK 500 9 SER A 97 146.65 62.13 REMARK 500 10 SER A 6 135.71 62.54 REMARK 500 10 THR A 11 116.34 -37.66 REMARK 500 10 SER A 14 -47.99 -149.46 REMARK 500 10 GLN A 30 -73.82 -48.93 REMARK 500 10 ALA A 39 -81.42 -66.98 REMARK 500 10 ASP A 50 -56.92 76.85 REMARK 500 10 ASP A 71 93.45 10.17 REMARK 500 10 ASP A 72 110.22 61.20 REMARK 500 11 ASP A 15 38.13 -97.77 REMARK 500 11 GLN A 30 -73.23 -49.30 REMARK 500 11 ALA A 39 -81.89 -64.80 REMARK 500 11 ASP A 50 -57.45 75.74 REMARK 500 11 ASP A 71 87.94 18.21 REMARK 500 11 ASP A 72 98.38 68.27 REMARK 500 11 SER A 92 139.62 178.23 REMARK 500 11 SER A 97 107.64 59.29 REMARK 500 12 SER A 2 123.39 65.53 REMARK 500 12 THR A 11 172.87 51.66 REMARK 500 12 ARG A 12 -142.18 -110.07 REMARK 500 12 SER A 14 -73.46 -103.38 REMARK 500 12 ASP A 15 -56.64 173.19 REMARK 500 12 GLN A 30 -71.08 -50.05 REMARK 500 12 ALA A 39 -82.22 -63.99 REMARK 500 12 LYS A 49 -177.70 -69.71 REMARK 500 12 ASP A 50 -57.63 75.51 REMARK 500 12 ASP A 71 89.52 15.89 REMARK 500 12 ASP A 72 101.17 65.52 REMARK 500 12 SER A 92 97.49 50.74 REMARK 500 12 SER A 93 79.65 -173.88 REMARK 500 12 SER A 97 -67.93 72.15 REMARK 500 13 SER A 2 109.88 57.29 REMARK 500 13 SER A 14 162.82 -42.15 REMARK 500 13 ASP A 15 70.30 -112.20 REMARK 500 13 GLN A 30 -71.22 -54.29 REMARK 500 13 ALA A 39 -72.29 -60.38 REMARK 500 13 ASP A 50 -34.23 88.12 REMARK 500 13 ASP A 71 79.37 17.70 REMARK 500 13 ASP A 72 104.92 73.68 REMARK 500 13 ARG A 91 -158.51 38.51 REMARK 500 13 SER A 93 85.28 50.55 REMARK 500 13 SER A 97 165.51 63.18 REMARK 500 14 SER A 3 -58.63 -179.63 REMARK 500 14 THR A 11 164.00 -48.15 REMARK 500 14 ARG A 12 116.76 -174.88 REMARK 500 14 SER A 14 -90.81 -69.78 REMARK 500 14 ASP A 15 -47.22 -168.25 REMARK 500 14 LEU A 23 155.24 -40.67 REMARK 500 14 GLN A 30 -72.34 -42.56 REMARK 500 14 ASP A 34 -33.16 -36.80 REMARK 500 14 ALA A 39 -78.93 -65.72 REMARK 500 14 LYS A 49 173.09 -52.63 REMARK 500 14 ASP A 50 -57.04 74.97 REMARK 500 14 ASP A 71 87.48 20.33 REMARK 500 14 ASP A 72 104.44 65.02 REMARK 500 14 SER A 77 -175.10 -68.31 REMARK 500 14 GLU A 90 55.39 -115.68 REMARK 500 14 ARG A 91 92.99 47.50 REMARK 500 14 SER A 97 98.07 -172.32 REMARK 500 15 SER A 5 -59.13 -130.85 REMARK 500 15 SER A 14 -96.97 -126.75 REMARK 500 15 ASP A 15 -49.88 177.81 REMARK 500 15 LEU A 23 154.30 -41.03 REMARK 500 15 ALA A 39 -78.42 -64.55 REMARK 500 15 LYS A 49 174.02 -57.37 REMARK 500 15 ASP A 50 -57.63 74.05 REMARK 500 15 ASP A 71 81.42 17.09 REMARK 500 15 ASP A 72 103.24 73.32 REMARK 500 15 SER A 77 -173.10 -65.74 REMARK 500 15 SER A 92 82.63 65.15 REMARK 500 16 SER A 3 126.13 66.03 REMARK 500 16 ARG A 12 -151.02 -105.99 REMARK 500 16 SER A 14 163.82 174.44 REMARK 500 16 GLN A 30 -70.63 -50.77 REMARK 500 16 ALA A 39 -76.36 -62.50 REMARK 500 16 ASP A 50 -58.37 78.04 REMARK 500 16 ASP A 71 71.40 17.14 REMARK 500 16 ASP A 72 108.59 81.24 REMARK 500 16 PRO A 89 -166.81 -75.00 REMARK 500 16 SER A 92 146.98 65.55 REMARK 500 16 SER A 97 102.76 58.75 REMARK 500 17 SER A 3 85.13 46.42 REMARK 500 17 THR A 11 164.91 54.34 REMARK 500 17 SER A 14 -89.36 -103.62 REMARK 500 17 ASP A 15 -58.72 -170.14 REMARK 500 17 PHE A 16 109.46 -41.41 REMARK 500 17 GLN A 30 -74.26 -44.34 REMARK 500 17 ALA A 39 -75.97 -60.91 REMARK 500 17 LYS A 49 -178.77 -65.63 REMARK 500 17 ASP A 50 -58.81 72.82 REMARK 500 17 ASP A 71 92.00 18.21 REMARK 500 17 ASP A 72 100.20 62.58 REMARK 500 17 SER A 93 -62.41 -138.82 REMARK 500 18 SER A 5 -51.03 -151.58 REMARK 500 18 SER A 14 178.93 179.93 REMARK 500 18 ASP A 15 58.71 -144.77 REMARK 500 18 ALA A 39 -81.64 -64.43 REMARK 500 18 LYS A 49 -178.97 -64.26 REMARK 500 18 ASP A 50 -58.71 73.86 REMARK 500 18 ASP A 71 77.29 9.45 REMARK 500 18 ASP A 72 102.38 81.76 REMARK 500 19 SER A 2 96.66 59.08 REMARK 500 19 SER A 5 109.30 -173.79 REMARK 500 19 GLU A 38 -39.53 -33.10 REMARK 500 19 ALA A 39 -74.19 -61.96 REMARK 500 19 LYS A 49 -171.55 -62.30 REMARK 500 19 ASP A 50 -59.37 72.76 REMARK 500 19 ASP A 71 88.89 16.21 REMARK 500 19 ASP A 72 100.98 67.26 REMARK 500 19 SER A 96 103.08 57.35 REMARK 500 20 ASP A 15 40.95 -107.75 REMARK 500 20 LEU A 23 151.65 -40.19 REMARK 500 20 GLN A 30 -70.26 -38.90 REMARK 500 20 ASP A 34 -30.51 -38.98 REMARK 500 20 ALA A 39 -81.58 -60.97 REMARK 500 20 LYS A 49 -178.84 -51.80 REMARK 500 20 ASP A 50 -58.55 71.16 REMARK 500 20 ASP A 71 88.21 17.67 REMARK 500 20 ASP A 72 105.92 64.97 REMARK 500 20 SER A 93 127.03 -178.17 REMARK 500 20 SER A 97 81.48 56.08 REMARK 500 REMARK 500 REMARK: NULL

REMARK 650 REMARK 650 HELIX REMARK 650 AUTHOR DETERMINATION METHOD: AUTHOR DETERMINED

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007017169.1 RELATED DB: TARGETDB

DBREF 1WG4 A 8 92 UNP Q9D0B0 SFRS9_MOUSE 72 156

SEQADV 1WG4 GLY A 1 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 2 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 3 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 4 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 5 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 6 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 7 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 93 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 94 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 PRO A 95 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 96 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 SER A 97 UNP Q9D0B0 CLONING ARTIFACT SEQADV 1WG4 GLY A 98 UNP Q9D0B0 CLONING ARTIFACT

SEQRES 1 A 98 GLY SER SER GLY SER SER GLY GLY PRO PRO THR ARG ARG SEQRES 2 A 98 SER ASP PHE ARG VAL LEU VAL SER GLY LEU PRO PRO SER SEQRES 3 A 98 GLY SER TRP GLN ASP LEU LYS ASP HIS MET ARG GLU ALA SEQRES 4 A 98 GLY ASP VAL CYS TYR ALA ASP VAL GLN LYS ASP GLY MET SEQRES 5 A 98 GLY MET VAL GLU TYR LEU ARG LYS GLU ASP MET GLU TYR SEQRES 6 A 98 ALA LEU ARG LYS LEU ASP ASP THR LYS PHE ARG SER HIS SEQRES 7 A 98 GLU GLY GLU THR SER TYR ILE ARG VAL TYR PRO GLU ARG SEQRES 8 A 98 SER SER GLY PRO SER SER GLY

HELIX 1 1 TRP A 29 MET A 36 1 8 HELIX 2 2 LYS A 60 LEU A 70 1 11

SHEET 1 A 5 VAL A 42 GLN A 48 0 SHEET 2 A 5 MET A 52 TYR A 57 -1 O MET A 54 N ASP A 46 SHEET 3 A 5 ARG A 17 SER A 21 -1 N VAL A 20 O GLY A 53 SHEET 4 A 5 THR A 82 TYR A 88 -1 O TYR A 88 N LEU A 19 SHEET 5 A 5 THR A 73 ARG A 76 -1 N PHE A 75 O SER A 83

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000