10 20 30 40 50 60 70 80 1W8F - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SUGAR BINDING PROTEIN 21-SEP-04 1W8F
TITLE PSEUDOMONAS AERUGINOSA LECTIN II (PA-IIL) COMPLEXED WITH TITLE 2 LACTO-N-NEO-FUCOPENTAOSE V(LNPFV)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PSEUDOMONAS AERUGINOSA LECTIN II; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PA-IIL; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: EACH MONOMER CONTAINS TWO CLOSE CALCIUM COMPND 7 CATIONS THAT MEDIATE THE BINDING OF THE SACCHARIDE
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET25PA2L
KEYWDS SUGAR BINDING PROTEIN, PENTASSACHARIDE, CYSTIC FIROSIS KEYWDS 2 INFECTION OF LUNGS
EXPDTA X-RAY DIFFRACTION
AUTHOR S.PERRET,C.SABIN,C.DUMON,M.BUDOVA,C.GAUTIER,O.GALANINA, AUTHOR 2 S.ILIA,N.BOVIN,M.NICAISE,M.DESMADRIL,N.GILBOA-GARBER, AUTHOR 3 M.WIMMEROVA,E.P.MITCHELL,A.IMBERTY
REVDAT 4 30-JAN-13 1W8F 1 HEADER SOURCE KEYWDS JRNL REVDAT 4 2 REMARK VERSN HETSYN FORMUL REVDAT 4 3 SITE REVDAT 3 24-FEB-09 1W8F 1 VERSN REVDAT 2 14-AUG-06 1W8F 1 JRNL REVDAT 1 31-MAR-05 1W8F 0
JRNL AUTH S.PERRET,C.SABIN,C.DUMON,M.POKORNA,C.GAUTIER,O.GALANINA, JRNL AUTH 2 S.ILIA,N.BOVIN,M.NICAISE,M.DESMADRIL,N.GILBOA-GARBER, JRNL AUTH 3 M.WIMMEROVA,E.P.MITCHELL,A.IMBERTY JRNL TITL STRUCTURAL BASIS FOR THE INTERACTION BETWEEN HUMAN MILK JRNL TITL 2 OLIGOSACCHARIDES AND THE BACTERIAL LECTIN PA-IIL OF JRNL TITL 3 PSEUDOMONAS AERUGINOSA. JRNL REF BIOCHEM.J. V. 389 325 2005 JRNL REFN ISSN 0264-6021 JRNL PMID 15790314 JRNL DOI 10.1042/BJ20050079
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.MITCHELL,C.HOULES,D.SUDAKEVITZ,M.WIMMEROVA, REMARK 1 AUTH 2 C.GAUTIER,S.PEREZ,A.WU,N.GILBOA-GARBER,A.IMBERTY REMARK 1 TITL STRUCTURAL BASIS FOR OLIGOSACCHARIDE-MEDIATED REMARK 1 TITL 2 ADHESION OF PSEUDOMONAS AERUGINOSA IN THE LUNGS OF REMARK 1 TITL 3 CYSTIC FIBROSIS PATIENTS. REMARK 1 REF NAT.STRUCT.BIOL. V. 12 918 2002 REMARK 1 REFN ISSN 1072-8368 REMARK 1 PMID 12415289 REMARK 1 DOI 10.1038/NSB865
REMARK 2 REMARK 2 RESOLUTION. 1.05 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 171406 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.106 REMARK 3 R VALUE (WORKING SET) : 0.105 REMARK 3 FREE R VALUE : 0.123 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9072 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 12059 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1800 REMARK 3 BIN FREE R VALUE SET COUNT : 660 REMARK 3 BIN FREE R VALUE : 0.1920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3564 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 237 REMARK 3 SOLVENT ATOMS : 727 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.021 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.022 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.014 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.271 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.979 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3873 ; 0.021 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3288 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5339 ; 2.059 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7663 ; 1.292 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 516 ; 7.259 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 685 ; 0.156 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4455 ; 0.017 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 680 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 741 ; 0.247 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4101 ; 0.275 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2483 ; 0.094 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 548 ; 0.275 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.169 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 79 ; 0.348 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 62 ; 0.229 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2446 ; 2.018 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4004 ; 2.849 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1427 ; 3.522 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1335 ; 4.905 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 1W8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-SEP-04. REMARK 100 THE PDBE ID CODE IS EBI-21105.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL DIAMOND REMARK 200 OPTICS : MULTILAYER MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 180957 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050 REMARK 200 RESOLUTION RANGE LOW (A) : 14.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: ACORN REMARK 200 STARTING MODEL: PDB ENTRY 1GZT REMARK 200 REMARK 200 REMARK: PHASING WAS PERFORMED WITH ACORN, USING ONLY THE REMARK 200 POSITION OF 3 OF THE CALCIUM IONS FROM THE CRYSTAL STRUCTURE REMARK 200 OF PA-IIL COMPLEXED WITH FUCOSE PREVIOUSLY SOLVED AT 1 ANG REMARK 200 RESOLUTION
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.6 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.3 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS HCL 0.1M, PH8.5, 1.75 M REMARK 280 AMMNONIUM SULFATE
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET B 0 REMARK 465 MET C 0 REMARK 465 MET D 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 13 OD1 ASN D 46 1.62 REMARK 500 OD1 ASN A 33 O HOH A 2060 1.66 REMARK 500 OD1 ASN B 46 NH1 ARG D 13 1.91 REMARK 500 O HOH C 2001 O HOH D 2112 2.00 REMARK 500 CZ ARG B 72 O HOH B 2134 2.03 REMARK 500 O HOH B 2015 O HOH B 2158 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2055 O HOH C 2076 1645 1.95 REMARK 500 O HOH A 2050 O HOH B 2060 1556 2.00 REMARK 500 O HOH A 2004 O HOH C 2129 1545 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 13 NE - CZ - NH1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG D 13 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 46 36.69 -144.25 REMARK 500 GLU A 86 -50.49 -138.77 REMARK 500 GLU B 86 -41.40 -140.15 REMARK 500 ASN C 70 49.36 39.55 REMARK 500 GLU C 86 -46.69 -135.05 REMARK 500 GLU D 86 -32.52 -149.09 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1116 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 99 OD1 REMARK 620 2 GLU A 95 OE1 88.1 REMARK 620 3 GLU A 95 OE2 82.3 53.7 REMARK 620 4 ASP A 104 OD2 162.6 83.0 80.3 REMARK 620 5 ASP A 101 OD1 85.4 78.9 131.2 107.4 REMARK 620 6 ASP A 104 OD1 145.9 116.4 130.9 51.0 77.3 REMARK 620 7 FUC A1118 O2 98.5 139.5 87.4 79.2 141.1 78.5 REMARK 620 8 FUC A1118 O3 75.6 151.2 143.3 118.4 76.2 71.8 67.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1117 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD1 REMARK 620 2 ASP A 101 OD2 45.7 REMARK 620 3 ASN A 103 OD1 70.7 75.6 REMARK 620 4 ASP A 104 OD1 69.2 114.9 86.0 REMARK 620 5 FUC A1118 O3 64.1 74.3 134.7 77.1 REMARK 620 6 ASN A 21 O 143.5 153.6 86.0 81.9 131.2 REMARK 620 7 FUC A1118 O4 129.1 115.4 160.0 102.7 65.2 77.6 REMARK 620 8 GLY C 114 O 125.1 80.7 87.4 160.8 119.6 79.7 78.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1116 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 FUC B1118 O3 REMARK 620 2 GLU B 95 OE1 151.3 REMARK 620 3 GLU B 95 OE2 143.6 53.3 REMARK 620 4 ASP B 99 OD1 74.8 89.1 83.1 REMARK 620 5 ASP B 101 OD1 76.7 78.6 130.6 85.6 REMARK 620 6 ASP B 104 OD1 72.0 115.9 130.9 145.2 76.8 REMARK 620 7 ASP B 104 OD2 118.2 82.5 80.8 163.8 106.1 50.5 REMARK 620 8 FUC B1118 O2 68.0 139.2 87.7 98.7 141.6 78.4 79.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1117 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 21 O REMARK 620 2 GLY D 114 O 81.3 REMARK 620 3 FUC B1118 O3 129.5 119.1 REMARK 620 4 FUC B1118 O4 75.4 79.0 65.7 REMARK 620 5 ASP B 101 OD1 144.2 123.8 64.4 130.0 REMARK 620 6 ASP B 104 OD1 81.9 161.9 77.3 103.2 68.7 REMARK 620 7 ASN B 103 OD1 87.5 87.4 134.8 159.5 70.5 85.1 REMARK 620 8 ASP B 101 OD2 155.0 79.8 74.6 116.5 45.3 114.0 75.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C1116 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 95 OE1 REMARK 620 2 ASP C 101 OD1 78.7 REMARK 620 3 ASP C 104 OD1 116.3 76.8 REMARK 620 4 ASP C 104 OD2 83.4 107.6 51.1 REMARK 620 5 ASP C 99 OD1 86.7 85.7 147.0 161.5 REMARK 620 6 FUC C1118 O3 150.9 76.2 71.7 118.0 77.1 REMARK 620 7 GLU C 95 OE2 53.5 131.1 130.3 79.5 82.1 144.2 REMARK 620 8 FUC C1118 O2 140.0 140.8 78.4 78.5 99.6 67.5 88.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C1117 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 101 OD1 REMARK 620 2 ASN C 103 OD1 71.1 REMARK 620 3 ASP C 104 OD1 68.8 85.7 REMARK 620 4 GLY A 114 O 124.4 86.4 160.9 REMARK 620 5 ASN C 21 O 144.6 87.4 82.2 80.1 REMARK 620 6 ASP C 101 OD2 45.8 76.0 114.6 80.1 154.9 REMARK 620 7 FUC C1118 O3 64.1 135.2 76.4 120.7 129.1 74.8 REMARK 620 8 FUC C1118 O4 129.6 159.1 103.4 79.1 75.5 115.5 65.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D1116 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 104 OD1 REMARK 620 2 FUC D1118 O2 78.2 REMARK 620 3 ASP D 99 OD1 145.7 98.9 REMARK 620 4 ASP D 101 OD1 76.6 140.5 85.7 REMARK 620 5 FUC D1118 O3 71.7 67.3 75.7 76.1 REMARK 620 6 ASP D 104 OD2 51.0 79.1 162.8 106.9 118.2 REMARK 620 7 GLU D 95 OE1 116.5 139.4 88.1 79.6 151.6 82.8 REMARK 620 8 GLU D 95 OE2 130.4 87.4 83.0 132.0 143.4 79.8 53.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D1117 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 21 O REMARK 620 2 GLY B 114 O 79.8 REMARK 620 3 ASN D 103 OD1 86.8 86.7 REMARK 620 4 ASP D 104 OD1 82.3 161.1 86.2 REMARK 620 5 FUC D1118 O4 77.7 79.1 160.5 103.1 REMARK 620 6 ASP D 101 OD1 143.5 125.2 70.7 68.3 128.6 REMARK 620 7 ASP D 101 OD2 154.2 80.8 75.2 114.1 115.1 45.8 REMARK 620 8 FUC D1118 O3 130.8 120.1 134.5 76.7 64.9 63.9 74.2 REMARK 620 N 1 2 3 4 5 6 7
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED.
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B1116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B1117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C1115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C1116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C1117 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D1115 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D1116 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D1117 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1123 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D1123 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 FUC A1118 AND BGC A1119 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 BGC A1119 AND GAL A1120 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 GAL A1120 AND NAG A1121 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 FUC B1118 AND BGC B1119 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 BGC B1119 AND GAL B1120 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 GAL B1120 AND NAG B1121 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 NAG B1121 AND GAL B1122 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 FUC C1118 AND BGC C1119 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 BGC C1119 AND GAL C1120 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 FUC D1118 AND BGC D1119 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 BGC D1119 AND GAL D1120 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 GAL D1120 AND NAG D1121 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUES REMARK 800 NAG D1121 AND GAL D1122
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GZT RELATED DB: PDB REMARK 900 PSEUDOMONAS AERUGINOSA LECTIN II (PA-IIL) REMARK 900 TOGETHER WITH FUCOSE REMARK 900 RELATED ID: 1OUR RELATED DB: PDB REMARK 900 LECB (PA-LII) IN COMPLEX WITH MANNOSE REMARK 900 RELATED ID: 1OUS RELATED DB: PDB REMARK 900 LECB (PA-LII) CALCIUM-FREE REMARK 900 RELATED ID: 1OUX RELATED DB: PDB REMARK 900 LECB (PA-LII) SUGAR-FREE REMARK 900 RELATED ID: 1OVP RELATED DB: PDB REMARK 900 LECB (PA-LII) IN COMPLEX WITH FRUCTOSE REMARK 900 RELATED ID: 1OVS RELATED DB: PDB REMARK 900 LECB (PA-LII) IN COMPLEX WITH CORE REMARK 900 TRIMANNOSIDE REMARK 900 RELATED ID: 1OXC RELATED DB: PDB REMARK 900 LECB (PA-LII) IN COMPLEX WITH FUCOSE REMARK 900 RELATED ID: 1UZV RELATED DB: PDB REMARK 900 HIGH AFFINITY FUCOSE BINDING OF PSEUDOMONAS REMARK 900 AERUGINOSA LECTIN II: 1.0 A CRYSTAL REMARK 900 STRUCTURE OF THE COMPLEX REMARK 900 RELATED ID: 1W38 RELATED DB: PDB REMARK 900 PSEUDOMONAS AERUGINOSA LECTIN II (PA-IIL) REMARK 900 COMPLEXED WITH LACTO-N-NEO-FUCOPENTAOSE V ( REMARK 900 LNPF V) REMARK 900 RELATED ID: 1W43 RELATED DB: PDB REMARK 900 STRUCTURE OF PSEUDOMONAS AERUGINOSA LECTIN II REMARK 900 (PA-IIL)COMPLEXED WITH LEWISA TRISACCHARIDE REMARK 900 RELATED ID: 1W8H RELATED DB: PDB REMARK 900 STRUCTURE OF PSEUDOMONAS AERUGINOSA LECTIN II REMARK 900 (PA-IIL)COMPLEXED WITH LEWISA TRISACCHARIDE
DBREF 1W8F A 0 114 UNP Q9HYN5 Q9HYN5 1 115 DBREF 1W8F B 0 114 UNP Q9HYN5 Q9HYN5 1 115 DBREF 1W8F C 0 114 UNP Q9HYN5 Q9HYN5 1 115 DBREF 1W8F D 0 114 UNP Q9HYN5 Q9HYN5 1 115
SEQRES 1 A 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 A 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 A 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 A 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 A 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 A 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 A 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 A 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 A 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 B 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 B 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 B 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 B 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 B 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 B 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 B 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 B 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 B 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 C 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 C 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 C 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 C 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 C 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 C 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 C 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 C 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 C 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY SEQRES 1 D 115 MET ALA THR GLN GLY VAL PHE THR LEU PRO ALA ASN THR SEQRES 2 D 115 ARG PHE GLY VAL THR ALA PHE ALA ASN SER SER GLY THR SEQRES 3 D 115 GLN THR VAL ASN VAL LEU VAL ASN ASN GLU THR ALA ALA SEQRES 4 D 115 THR PHE SER GLY GLN SER THR ASN ASN ALA VAL ILE GLY SEQRES 5 D 115 THR GLN VAL LEU ASN SER GLY SER SER GLY LYS VAL GLN SEQRES 6 D 115 VAL GLN VAL SER VAL ASN GLY ARG PRO SER ASP LEU VAL SEQRES 7 D 115 SER ALA GLN VAL ILE LEU THR ASN GLU LEU ASN PHE ALA SEQRES 8 D 115 LEU VAL GLY SER GLU ASP GLY THR ASP ASN ASP TYR ASN SEQRES 9 D 115 ASP ALA VAL VAL VAL ILE ASN TRP PRO LEU GLY
HET FUC A1118 11 HET BGC A1119 11 HET GAL A1120 11 HET NAG A1121 14 HET FUC B1118 11 HET BGC B1119 12 HET GAL B1120 11 HET NAG B1121 14 HET GAL B1122 11 HET FUC C1118 11 HET BGC C1119 11 HET GAL C1120 11 HET FUC D1118 11 HET BGC D1119 11 HET GAL D1120 11 HET NAG D1121 14 HET GAL D1122 11 HET SO4 A1115 5 HET CA A1116 1 HET CA A1117 1 HET SO4 B1115 5 HET CA B1116 1 HET CA B1117 1 HET SO4 C1115 5 HET CA C1116 1 HET CA C1117 1 HET SO4 D1115 5 HET CA D1116 1 HET CA D1117 1 HET GOL B1123 6 HET GOL D1123 6
HETNAM FUC ALPHA-L-FUCOSE HETNAM BGC BETA-D-GLUCOSE HETNAM GAL BETA-D-GALACTOSE HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM SO4 SULFATE ION HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL
HETSYN GOL GLYCERIN: PROPANE-1,2,3-TRIOL
FORMUL 5 FUC 4(C6 H12 O5) FORMUL 5 BGC 4(C6 H12 O6) FORMUL 5 GAL 6(C6 H12 O6) FORMUL 5 NAG 3(C8 H15 N O6) FORMUL 9 SO4 4(O4 S 2-) FORMUL 10 CA 8(CA 2+) FORMUL 21 GOL 2(C3 H8 O3) FORMUL 23 HOH *727(H2 O)
SHEET 1 AA 4 VAL A 5 THR A 7 0 SHEET 2 AA 4 LYS A 62 VAL A 69 -1 O VAL A 63 N PHE A 6 SHEET 3 AA 4 GLN A 26 VAL A 32 -1 O THR A 27 N SER A 68 SHEET 4 AA 4 GLU A 35 GLY A 42 -1 O ALA A 38 N VAL A 30 SHEET 1 AB 5 ASN A 46 LEU A 55 0 SHEET 2 AB 5 PHE A 14 ASN A 21 -1 O VAL A 16 N GLN A 53 SHEET 3 AB 5 ASP A 104 TRP A 111 -1 O VAL A 108 N THR A 17 SHEET 4 AB 5 LEU A 87 SER A 94 -1 O VAL A 92 N VAL A 107 SHEET 5 AB 5 ASP A 75 LEU A 83 -1 O ALA A 79 N LEU A 91 SHEET 1 BA 4 VAL B 5 THR B 7 0 SHEET 2 BA 4 LYS B 62 VAL B 69 -1 O VAL B 63 N PHE B 6 SHEET 3 BA 4 GLN B 26 VAL B 32 -1 O THR B 27 N SER B 68 SHEET 4 BA 4 GLU B 35 GLY B 42 -1 O ALA B 38 N VAL B 30 SHEET 1 BB 5 ASN B 46 LEU B 55 0 SHEET 2 BB 5 PHE B 14 ASN B 21 -1 O VAL B 16 N GLN B 53 SHEET 3 BB 5 ASP B 104 TRP B 111 -1 O VAL B 108 N THR B 17 SHEET 4 BB 5 LEU B 87 SER B 94 -1 O VAL B 92 N VAL B 107 SHEET 5 BB 5 ASP B 75 LEU B 83 -1 O ALA B 79 N LEU B 91 SHEET 1 CA 4 VAL C 5 THR C 7 0 SHEET 2 CA 4 LYS C 62 VAL C 69 -1 O VAL C 63 N PHE C 6 SHEET 3 CA 4 GLN C 26 VAL C 32 -1 O THR C 27 N SER C 68 SHEET 4 CA 4 GLU C 35 GLY C 42 -1 O ALA C 38 N VAL C 30 SHEET 1 CB 5 ASN C 46 LEU C 55 0 SHEET 2 CB 5 PHE C 14 ASN C 21 -1 O VAL C 16 N GLN C 53 SHEET 3 CB 5 ASP C 104 TRP C 111 -1 O VAL C 108 N THR C 17 SHEET 4 CB 5 LEU C 87 SER C 94 -1 O VAL C 92 N VAL C 107 SHEET 5 CB 5 ASP C 75 LEU C 83 -1 O ALA C 79 N LEU C 91 SHEET 1 DA 4 VAL D 5 THR D 7 0 SHEET 2 DA 4 LYS D 62 VAL D 69 -1 O VAL D 63 N PHE D 6 SHEET 3 DA 4 GLN D 26 VAL D 32 -1 O THR D 27 N SER D 68 SHEET 4 DA 4 GLU D 35 GLY D 42 -1 O ALA D 38 N VAL D 30 SHEET 1 DB 5 ASN D 46 LEU D 55 0 SHEET 2 DB 5 PHE D 14 ASN D 21 -1 O VAL D 16 N GLN D 53 SHEET 3 DB 5 ASP D 104 TRP D 111 -1 O VAL D 108 N THR D 17 SHEET 4 DB 5 LEU D 87 SER D 94 -1 O VAL D 92 N VAL D 107 SHEET 5 DB 5 ASP D 75 LEU D 83 -1 O ALA D 79 N LEU D 91
LINK CA CA A1116 OD1 ASP A 99 1555 1555 2.37 LINK CA CA A1116 OE1 GLU A 95 1555 1555 2.47 LINK CA CA A1116 OE2 GLU A 95 1555 1555 2.40 LINK CA CA A1116 OD2 ASP A 104 1555 1555 2.42 LINK CA CA A1116 OD1 ASP A 101 1555 1555 2.35 LINK CA CA A1116 OD1 ASP A 104 1555 1555 2.65 LINK CA CA A1116 O2 FUC A1118 1555 1555 2.45 LINK CA CA A1116 O3 FUC A1118 1555 1555 2.48 LINK CA CA A1117 OD1 ASP A 101 1555 1555 3.06 LINK CA CA A1117 OD2 ASP A 101 1555 1555 2.43 LINK CA CA A1117 OD1 ASN A 103 1555 1555 2.34 LINK CA CA A1117 OD1 ASP A 104 1555 1555 2.35 LINK CA CA A1117 O3 FUC A1118 1555 1555 2.48 LINK CA CA A1117 O ASN A 21 1555 1555 2.38 LINK CA CA A1117 O4 FUC A1118 1555 1555 2.48 LINK CA CA A1117 O GLY C 114 1555 1555 2.42 LINK O1 FUC A1118 C3 BGC A1119 1555 1555 1.40 LINK O4 BGC A1119 C1 GAL A1120 1555 1555 1.38 LINK O3 GAL A1120 C1 NAG A1121 1555 1555 1.35 LINK CA CA B1116 O3 FUC B1118 1555 1555 2.47 LINK CA CA B1116 OE1 GLU B 95 1555 1555 2.50 LINK CA CA B1116 OE2 GLU B 95 1555 1555 2.38 LINK CA CA B1116 OD1 ASP B 99 1555 1555 2.38 LINK CA CA B1116 OD1 ASP B 101 1555 1555 2.35 LINK CA CA B1116 OD1 ASP B 104 1555 1555 2.64 LINK CA CA B1116 OD2 ASP B 104 1555 1555 2.41 LINK CA CA B1116 O2 FUC B1118 1555 1555 2.45 LINK CA CA B1117 O ASN B 21 1555 1555 2.36 LINK CA CA B1117 O GLY D 114 1555 1555 2.38 LINK CA CA B1117 O3 FUC B1118 1555 1555 2.47 LINK CA CA B1117 OD2 ASP B 101 1555 1555 2.43 LINK CA CA B1117 OD1 ASN B 103 1555 1555 2.35 LINK CA CA B1117 OD1 ASP B 104 1555 1555 2.35 LINK CA CA B1117 OD1 ASP B 101 1555 1555 3.06 LINK CA CA B1117 O4 FUC B1118 1555 1555 2.50 LINK O1 FUC B1118 C3 BGC B1119 1555 1555 1.41 LINK O4 BGC B1119 C1 GAL B1120 1555 1555 1.38 LINK O3 GAL B1120 C1 NAG B1121 1555 1555 1.38 LINK O4 NAG B1121 C1 GAL B1122 1555 1555 1.36 LINK CA CA C1116 O2 FUC C1118 1555 1555 2.46 LINK CA CA C1116 O3 FUC C1118 1555 1555 2.47 LINK CA CA C1116 OD2 ASP C 104 1555 1555 2.41 LINK CA CA C1116 OE2 GLU C 95 1555 1555 2.39 LINK CA CA C1116 OD1 ASP C 99 1555 1555 2.36 LINK CA CA C1116 OD1 ASP C 104 1555 1555 2.64 LINK CA CA C1116 OE1 GLU C 95 1555 1555 2.46 LINK CA CA C1116 OD1 ASP C 101 1555 1555 2.35 LINK CA CA C1117 O GLY A 114 1555 1555 2.40 LINK CA CA C1117 O ASN C 21 1555 1555 2.38 LINK CA CA C1117 OD2 ASP C 101 1555 1555 2.41 LINK CA CA C1117 O3 FUC C1118 1555 1555 2.48 LINK CA CA C1117 OD1 ASP C 101 1555 1555 3.05 LINK CA CA C1117 OD1 ASN C 103 1555 1555 2.35 LINK CA CA C1117 O4 FUC C1118 1555 1555 2.49 LINK CA CA C1117 OD1 ASP C 104 1555 1555 2.36 LINK O1 FUC C1118 C3 BGC C1119 1555 1555 1.42 LINK O4 BGC C1119 C1 GAL C1120 1555 1555 1.36 LINK CA CA D1116 OE1 GLU D 95 1555 1555 2.46 LINK CA CA D1116 OE2 GLU D 95 1555 1555 2.40 LINK CA CA D1116 OD1 ASP D 104 1555 1555 2.64 LINK CA CA D1116 O2 FUC D1118 1555 1555 2.46 LINK CA CA D1116 OD1 ASP D 99 1555 1555 2.37 LINK CA CA D1116 OD1 ASP D 101 1555 1555 2.34 LINK CA CA D1116 O3 FUC D1118 1555 1555 2.48 LINK CA CA D1116 OD2 ASP D 104 1555 1555 2.42 LINK CA CA D1117 O ASN D 21 1555 1555 2.37 LINK CA CA D1117 OD2 ASP D 101 1555 1555 2.42 LINK CA CA D1117 O4 FUC D1118 1555 1555 2.50 LINK CA CA D1117 O3 FUC D1118 1555 1555 2.48 LINK CA CA D1117 OD1 ASP D 101 1555 1555 3.06 LINK CA CA D1117 OD1 ASN D 103 1555 1555 2.34 LINK CA CA D1117 OD1 ASP D 104 1555 1555 2.35 LINK CA CA D1117 O GLY B 114 1555 1555 2.41 LINK O1 FUC D1118 C3 BGC D1119 1555 1555 1.43 LINK O4 BGC D1119 C1 GAL D1120 1555 1555 1.39 LINK O3 GAL D1120 C1 NAG D1121 1555 1555 1.37 LINK O4 NAG D1121 C1 GAL D1122 1555 1555 1.37
CISPEP 1 TRP A 111 PRO A 112 0 -6.34 CISPEP 2 TRP B 111 PRO B 112 0 -8.17 CISPEP 3 TRP C 111 PRO C 112 0 -8.31 CISPEP 4 TRP D 111 PRO D 112 0 -4.81
SITE 1 AC1 14 ASN A 21 SER A 22 SER A 23 GLU A 95 SITE 2 AC1 14 ASP A 96 ASP A 99 ASP A 101 ASP A 104 SITE 3 AC1 14 CA A1116 CA A1117 BGC A1119 GAL A1120 SITE 4 AC1 14 HOH A2157 GLY C 114 SITE 1 AC2 8 SER A 23 ASP A 96 FUC A1118 GAL A1120 SITE 2 AC2 8 HOH A2152 HOH A2154 HOH A2155 HOH A2156 SITE 1 AC3 9 ASP A 99 FUC A1118 BGC A1119 NAG A1121 SITE 2 AC3 9 HOH A2157 HOH A2158 HOH A2159 HOH A2160 SITE 3 AC3 9 HOH A2161 SITE 1 AC4 7 GAL A1120 HOH A2162 HOH A2163 HOH A2164 SITE 2 AC4 7 HOH A2166 GLU D 35 HOH D2063 SITE 1 AC5 14 ASN B 21 SER B 22 SER B 23 GLU B 95 SITE 2 AC5 14 ASP B 96 ASP B 99 ASP B 101 ASP B 104 SITE 3 AC5 14 CA B1116 CA B1117 BGC B1119 GAL B1120 SITE 4 AC5 14 HOH B2186 GLY D 114 SITE 1 AC6 11 SER B 23 ASP B 96 FUC B1118 GAL B1120 SITE 2 AC6 11 HOH B2177 HOH B2178 HOH B2179 HOH B2180 SITE 3 AC6 11 HOH B2181 HOH B2182 HOH B2183 SITE 1 AC7 11 THR B 98 ASP B 99 FUC B1118 BGC B1119 SITE 2 AC7 11 NAG B1121 GOL B1123 HOH B2163 HOH B2184 SITE 3 AC7 11 HOH B2185 HOH B2186 HOH B2187 SITE 1 AC8 9 GAL B1120 GAL B1122 HOH B2187 HOH B2188 SITE 2 AC8 9 HOH B2189 HOH B2191 HOH B2192 HOH B2195 SITE 3 AC8 9 GAL D1122 SITE 1 AC9 9 NAG B1121 HOH B2031 HOH B2194 HOH B2195 SITE 2 AC9 9 HOH B2196 HOH B2197 NAG D1121 GAL D1122 SITE 3 AC9 9 HOH D2170 SITE 1 BC1 14 GLY A 114 ASN C 21 SER C 22 SER C 23 SITE 2 BC1 14 GLU C 95 ASP C 96 ASP C 99 ASP C 101 SITE 3 BC1 14 ASP C 104 CA C1116 CA C1117 BGC C1119 SITE 4 BC1 14 GAL C1120 HOH C2182 SITE 1 BC2 6 SER C 23 ASP C 96 FUC C1118 GAL C1120 SITE 2 BC2 6 HOH C2177 HOH C2178 SITE 1 BC3 7 ASP C 99 FUC C1118 BGC C1119 HOH C2182 SITE 2 BC3 7 HOH C2183 HOH C2185 HOH C2187 SITE 1 BC4 14 GLY B 114 ASN D 21 SER D 22 SER D 23 SITE 2 BC4 14 GLU D 95 ASP D 96 ASP D 99 ASP D 101 SITE 3 BC4 14 ASP D 104 CA D1116 CA D1117 BGC D1119 SITE 4 BC4 14 GAL D1120 HOH D2157 SITE 1 BC5 9 SER D 23 ASP D 96 FUC D1118 GAL D1120 SITE 2 BC5 9 HOH D2149 HOH D2150 HOH D2151 HOH D2153 SITE 3 BC5 9 HOH D2154 SITE 1 BC6 11 THR D 98 ASP D 99 FUC D1118 BGC D1119 SITE 2 BC6 11 NAG D1121 GOL D1123 HOH D2155 HOH D2156 SITE 3 BC6 11 HOH D2157 HOH D2158 HOH D2161 SITE 1 BC7 9 GAL B1122 GAL D1120 GAL D1122 HOH D2159 SITE 2 BC7 9 HOH D2160 HOH D2161 HOH D2162 HOH D2163 SITE 3 BC7 9 HOH D2166 SITE 1 BC8 9 NAG B1121 GAL B1122 HOH B2198 NAG D1121 SITE 2 BC8 9 HOH D2023 HOH D2144 HOH D2165 HOH D2166 SITE 3 BC8 9 HOH D2167 SITE 1 BC9 10 SER A 44 THR A 45 ASN A 46 HOH A2076 SITE 2 BC9 10 HOH A2150 HOH A2151 SER D 44 ASN D 46 SITE 3 BC9 10 ALA D 48 HOH D2146 SITE 1 CC1 5 GLU A 95 ASP A 99 ASP A 101 ASP A 104 SITE 2 CC1 5 FUC A1118 SITE 1 CC2 6 ASN A 21 ASP A 101 ASN A 103 ASP A 104 SITE 2 CC2 6 FUC A1118 GLY C 114 SITE 1 CC3 6 SER B 44 THR B 45 ASN B 46 HOH B2173 SITE 2 CC3 6 HOH B2175 HOH B2176 SITE 1 CC4 5 GLU B 95 ASP B 99 ASP B 101 ASP B 104 SITE 2 CC4 5 FUC B1118 SITE 1 CC5 6 ASN B 21 ASP B 101 ASN B 103 ASP B 104 SITE 2 CC5 6 FUC B1118 GLY D 114 SITE 1 CC6 5 SER C 44 THR C 45 ASN C 46 HOH C2173 SITE 2 CC6 5 HOH C2174 SITE 1 CC7 5 GLU C 95 ASP C 99 ASP C 101 ASP C 104 SITE 2 CC7 5 FUC C1118 SITE 1 CC8 6 GLY A 114 ASN C 21 ASP C 101 ASN C 103 SITE 2 CC8 6 ASP C 104 FUC C1118 SITE 1 CC9 8 HOH B2196 ARG C 13 GLN D 43 THR D 45 SITE 2 CC9 8 HOH D2145 HOH D2146 HOH D2147 HOH D2148 SITE 1 DC1 5 GLU D 95 ASP D 99 ASP D 101 ASP D 104 SITE 2 DC1 5 FUC D1118 SITE 1 DC2 6 GLY B 114 ASN D 21 ASP D 101 ASN D 103 SITE 2 DC2 6 ASP D 104 FUC D1118 SITE 1 DC3 8 ASP B 99 GAL B1120 HOH B2167 HOH B2198 SITE 2 DC3 8 HOH B2200 HOH B2201 HOH B2202 GLY D 114 SITE 1 DC4 7 GLY B 114 ASP D 99 GAL D1120 HOH D2139 SITE 2 DC4 7 HOH D2169 HOH D2170 HOH D2171
CRYST1 47.015 48.352 52.472 85.35 80.05 65.60 P 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.021270 -0.009650 -0.003626 0.00000
SCALE2 0.000000 0.022711 -0.000245 0.00000
SCALE3 0.000000 0.000000 0.019350 0.00000