10 20 30 40 50 60 70 80 1VSE - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ENDORIBONUCLEASE 29-NOV-95 1VSE
TITLE ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES TITLE 2 LIGAND, LOW MG CONCENTRATION FORM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC CORE DOMAIN, RESIDUES 1 - 4, 52 - 209; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CRYSTALS SOAKED IN 20 MILLIMOILAR MGCL2
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ROUS SARCOMA VIRUS (STRAIN SCHMIDT- SOURCE 3 RUPPIN); SOURCE 4 ORGANISM_TAXID: 11889; SOURCE 5 STRAIN: SCHMIDT-RUPPIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRC23IN(52-207); SOURCE 9 OTHER_DETAILS: ORIGINAL VIRAL DNA CLONE\: JU ET AL., J. SOURCE 10 VIROL. 33:1026-1033 (1980), ORIGINAL EXPRESSION CLONE\: SOURCE 11 TERRY ET AL., J. VIROL. 62:2358-2365 (1988), EXPRESSION SOURCE 12 CLONE FOR CORE\: KULKOSKY ET AL., J. VIROL. 206:448-456 SOURCE 13 (1995)
KEYWDS HYDROLASE, ENDONUCLEASE, ENDORIBONUCLEASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.BUJACZ,M.JASKOLSKI,J.ALEXANDRATOS,A.WLODAWER
REVDAT 3 24-FEB-09 1VSE 1 VERSN REVDAT 2 01-APR-03 1VSE 1 JRNL REVDAT 1 03-APR-96 1VSE 0
JRNL AUTH G.BUJACZ,M.JASKOLSKI,J.ALEXANDRATOS,A.WLODAWER, JRNL AUTH 2 G.MERKEL,R.A.KATZ,A.M.SKALKA JRNL TITL THE CATALYTIC DOMAIN OF AVIAN SARCOMA VIRUS JRNL TITL 2 INTEGRASE: CONFORMATION OF THE ACTIVE-SITE JRNL TITL 3 RESIDUES IN THE PRESENCE OF DIVALENT CATIONS. JRNL REF STRUCTURE V. 4 89 1996 JRNL REFN ISSN 0969-2126 JRNL PMID 8805516 JRNL DOI 10.1016/S0969-2126(96)00012-3
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.1 REMARK 3 NUMBER OF REFLECTIONS : 7624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1125 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.013 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.041 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.049 ; 0.053 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.017 ; 0.025 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.149 ; 0.180 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.199 ; 0.400 REMARK 3 MULTIPLE TORSION (A) : 0.215 ; 0.400 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : 0.197 ; 0.400 REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 3.400 ; 3.600 REMARK 3 STAGGERED (DEGREES) : 17.400; 10.000 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.275 ; 2.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.550 ; 3.400 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.962 ; 3.800 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.426 ; 6.600 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1VSE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-95 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9523 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.280 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.5 THE PROTEIN WAS REMARK 280 CRYSTALLIZED FROM 20% PEG 4000, 10% ISOPROPANOL, 100 REMARK 280 MILLIMOLAR HEPES PH 7.5. CRYSTALS WERE THEN SOAKED IN 20 REMARK 280 MILLIMOLAR MGCL2.
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.79000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.12500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.12500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.18500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.12500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.12500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.39500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.12500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.12500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.18500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.12500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.12500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.39500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 40.79000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS FILE CONTAINS ONLY A MONOMER. IN ORDER TO CREATE REMARK 300 THE SECOND SUBUNIT OF THE DIMERIC MOLECULE, THE FRACTIONAL REMARK 300 CRYSTALLOGRAPHIC COORDINATES NEED TO BE TRANSFORMED BY Y, X, 1.0 REMARK 300 - Z.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 81.58000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 50 REMARK 465 LEU A 51 REMARK 465 ARG A 52 REMARK 465 GLU A 53 REMARK 465 ASN A 200 REMARK 465 LEU A 201
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 70 NH1 - CZ - NH2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG A 70 NE - CZ - NH2 ANGL. DEV. = -8.9 DEGREES REMARK 500 ARG A 74 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP A 82 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ILE A 88 CB - CA - C ANGL. DEV. = -12.5 DEGREES REMARK 500 GLN A 92 N - CA - CB ANGL. DEV. = -11.7 DEGREES REMARK 500 ARG A 95 NH1 - CZ - NH2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 95 NE - CZ - NH1 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG A 114 NE - CZ - NH1 ANGL. DEV. = 8.1 DEGREES REMARK 500 ARG A 114 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 121 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 GLU A 133 OE1 - CD - OE2 ANGL. DEV. = -8.2 DEGREES REMARK 500 ARG A 158 CD - NE - CZ ANGL. DEV. = 18.0 DEGREES REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 161 CB - CG - CD ANGL. DEV. = 19.4 DEGREES REMARK 500 ARG A 161 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 179 NE - CZ - NH1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 179 NE - CZ - NH2 ANGL. DEV. = -7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 149 -17.95 -49.94 REMARK 500 GLN A 151 102.01 69.14 REMARK 500 GLN A 153 57.30 -144.42 REMARK 500 LYS A 178 -122.11 -115.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 70 0.16 SIDE_CHAIN REMARK 500 ARG A 114 0.13 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 374 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 401 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH A 402 DISTANCE = 5.95 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ACT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ACTIVE SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 261
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE APPARENT DISCREPANCY BETWEEN THE SEQUENCE PRESENTED REMARK 999 HERE AND THE "POL_RSVP" SEQUENCE IS A RESULT OF VIRAL REMARK 999 STRAIN VARIATION. THE STRAIN USED FOR THIS WORK, REMARK 999 "ROUS SARCOMA VIRUS SCHMIDT-RUPPIN B", COMPARED TO REMARK 999 "POL-RSVP" SEQUENCE DIFFERS AT TWO POSITIONS WITH REMARK 999 THE CONSERVATIVE AMINO ACID RESIDUE DIFFERENCES NOTED REMARK 999 (VAL -> ALA 101 AND ARG -> LYS 166).
DBREF 1VSE A 54 199 UNP P03354 POL_RSVP 626 771
SEQADV 1VSE ALA A 101 UNP P03354 VAL 673 CONFLICT SEQADV 1VSE LYS A 166 UNP P03354 ARG 738 CONFLICT
SEQRES 1 A 152 PRO LEU ARG GLU GLY LEU GLY PRO LEU GLN ILE TRP GLN SEQRES 2 A 152 THR ASP PHE THR LEU GLU PRO ARG MET ALA PRO ARG SER SEQRES 3 A 152 TRP LEU ALA VAL THR VAL ASP THR ALA SER SER ALA ILE SEQRES 4 A 152 VAL VAL THR GLN HIS GLY ARG VAL THR SER VAL ALA ALA SEQRES 5 A 152 GLN HIS HIS TRP ALA THR ALA ILE ALA VAL LEU GLY ARG SEQRES 6 A 152 PRO LYS ALA ILE LYS THR ASP ASN GLY SER CYS PHE THR SEQRES 7 A 152 SER LYS SER THR ARG GLU TRP LEU ALA ARG TRP GLY ILE SEQRES 8 A 152 ALA HIS THR THR GLY ILE PRO GLY ASN SER GLN GLY GLN SEQRES 9 A 152 ALA MET VAL GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS SEQRES 10 A 152 ILE ARG VAL LEU ALA GLU GLY ASP GLY PHE MET LYS ARG SEQRES 11 A 152 ILE PRO THR SER LYS GLN GLY GLU LEU LEU ALA LYS ALA SEQRES 12 A 152 MET TYR ALA LEU ASN HIS PHE ASN LEU
HET EPE A 261 15
HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HETSYN EPE HEPES
FORMUL 2 EPE C8 H18 N2 O4 S FORMUL 3 HOH *124(H2 O)
HELIX 1 1 PRO A 69 MET A 71 5 3 HELIX 2 2 SER A 98 LEU A 112 1 15 HELIX 3 3 SER A 124 THR A 127 1 4 HELIX 4 4 LYS A 129 TRP A 138 1 10 HELIX 5 5 ALA A 154 GLY A 173 1 20 HELIX 6 6 THR A 182 ASN A 197 1 16
SHEET 1 A 5 ILE A 88 HIS A 93 0 SHEET 2 A 5 TRP A 76 ASP A 82 -1 N THR A 80 O VAL A 89 SHEET 3 A 5 ILE A 60 LEU A 67 -1 N THR A 66 O LEU A 77 SHEET 4 A 5 ALA A 117 LYS A 119 1 N ALA A 117 O TRP A 61 SHEET 5 A 5 ALA A 141 THR A 143 1 N ALA A 141 O ILE A 118
CISPEP 1 ALA A 72 PRO A 73 0 4.53
SITE 1 ACT 3 ASP A 64 ASP A 121 GLU A 157 SITE 1 AC1 15 PRO A 73 TRP A 76 GLY A 94 ARG A 95 SITE 2 AC1 15 VAL A 96 ARG A 137 TRP A 138 LYS A 166 SITE 3 AC1 15 LYS A 191 ALA A 195 HOH A 307 HOH A 311 SITE 4 AC1 15 HOH A 340 HOH A 351 HOH A 407
CRYST1 66.250 66.250 81.580 90.00 90.00 90.00 P 43 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015094 0.000000 0.000000 0.00000
SCALE2 0.000000 0.015094 0.000000 0.00000
SCALE3 0.000000 0.000000 0.012258 0.00000