10 20 30 40 50 60 70 80 1VKG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 13-MAY-04 1VKG
TITLE CRYSTAL STRUCTURE OF HUMAN HDAC8 COMPLEXED WITH CRA-19156
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEACETYLASE 8; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HDAC8; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HDAC8, HDACL1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PSXB2; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PFASTBACHTA
KEYWDS HISTONE DEACETYLASE, ZINC HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR J.R.SOMOZA,R.J.SKENE,B.A.KATZ,C.MOL,J.D.HO,A.J.JENNINGS, AUTHOR 2 C.LUONG,A.ARVAI,J.J.BUGGY,E.CHI,J.TANG,B.-C.SANG,E.VERNER, AUTHOR 3 R.WYNANDS,E.M.LEAHY,D.R.DOUGAN,G.SNELL,M.NAVRE,M.W.KNUTH, AUTHOR 4 R.V.SWANSON,D.E.MCREE,L.W.TARI
REVDAT 2 24-FEB-09 1VKG 1 VERSN REVDAT 1 27-JUL-04 1VKG 0
JRNL AUTH J.R.SOMOZA,R.J.SKENE,B.A.KATZ,C.MOL,J.D.HO, JRNL AUTH 2 A.J.JENNINGS,C.LUONG,A.ARVAI,J.J.BUGGY,E.CHI, JRNL AUTH 3 J.TANG,B.-C.SANG,E.VERNER,R.WYNANDS,E.M.LEAHY, JRNL AUTH 4 D.R.DOUGAN,G.SNELL,M.NAVRE,M.W.KNUTH,R.V.SWANSON, JRNL AUTH 5 D.E.MCREE,L.W.TARI JRNL TITL STRUCTURAL SNAPSHOTS OF HUMAN HDAC8 PROVIDE JRNL TITL 2 INSIGHTS INTO THE CLASS I HISTONE DEACETYLASES JRNL REF STRUCTURE V. 12 1325 2004 JRNL REFN ISSN 0969-2126 JRNL PMID 15242608 JRNL DOI 10.1016/J.STR.2004.04.012
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.100 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 34275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1872 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3650 REMARK 3 BIN R VALUE (WORKING SET) : 0.3890 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 202 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10798 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 733 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 3.80 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1VKG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-04. REMARK 100 THE RCSB ID CODE IS RCSB001950.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTAL REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37725 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 27.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : 0.09200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34200 REMARK 200 R SYM FOR SHELL (I) : 0.34200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-SIGHT REMARK 200 STARTING MODEL: PDB ENTRY 1T64 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, 0.2M KCL, PH 6.8-7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.31500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.38000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.35500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.38000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.31500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.35500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 ASP A 9 REMARK 465 SER A 10 REMARK 465 GLY A 11 REMARK 465 GLN A 12 REMARK 465 SER A 13 REMARK 465 LEU A 14 REMARK 465 ASP A 89 REMARK 465 HIS A 90 REMARK 465 PRO A 91 REMARK 465 ASP A 92 REMARK 465 SER A 93 REMARK 465 ILE A 94 REMARK 465 GLU A 95 REMARK 465 TYR A 96 REMARK 465 GLY A 97 REMARK 465 LEU A 98 REMARK 465 GLY A 99 REMARK 465 TYR A 100 REMARK 465 ASP A 101 REMARK 465 CYS A 102 REMARK 465 PRO A 103 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 GLU B 3 REMARK 465 PRO B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 PRO B 7 REMARK 465 ALA B 8 REMARK 465 ASP B 9 REMARK 465 SER B 10 REMARK 465 GLY B 11 REMARK 465 GLN B 12 REMARK 465 SER B 13 REMARK 465 LEU B 14 REMARK 465 ASP B 89 REMARK 465 HIS B 90 REMARK 465 PRO B 91 REMARK 465 ASP B 92 REMARK 465 SER B 93 REMARK 465 ILE B 94 REMARK 465 GLU B 95 REMARK 465 TYR B 96 REMARK 465 GLY B 97 REMARK 465 LEU B 98 REMARK 465 GLY B 99 REMARK 465 TYR B 100 REMARK 465 ASP B 101 REMARK 465 CYS B 102 REMARK 465 PRO B 103
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 51 NE2 HIS A 51 CD2 -0.066 REMARK 500 HIS A 142 NE2 HIS A 142 CD2 -0.070 REMARK 500 HIS A 180 NE2 HIS A 180 CD2 -0.074 REMARK 500 GLU A 238 CD GLU A 238 OE2 0.110 REMARK 500 HIS B 142 CG HIS B 142 CD2 0.055 REMARK 500 HIS B 142 NE2 HIS B 142 CD2 -0.067 REMARK 500 HIS B 180 NE2 HIS B 180 CD2 -0.072 REMARK 500 GLU B 238 CD GLU B 238 OE2 0.111 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 137 CG - CD1 - NE1 ANGL. DEV. = -7.2 DEGREES REMARK 500 TRP A 137 CD1 - NE1 - CE2 ANGL. DEV. = 7.9 DEGREES REMARK 500 TRP A 137 NE1 - CE2 - CZ2 ANGL. DEV. = 8.6 DEGREES REMARK 500 TRP A 141 CG - CD1 - NE1 ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP A 141 CD1 - NE1 - CE2 ANGL. DEV. = 8.6 DEGREES REMARK 500 TRP A 141 NE1 - CE2 - CZ2 ANGL. DEV. = 8.2 DEGREES REMARK 500 TRP A 141 NE1 - CE2 - CD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 164 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 LEU A 200 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 ASP A 213 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 223 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 CYS A 244 CA - CB - SG ANGL. DEV. = 11.2 DEGREES REMARK 500 CYS A 287 CA - CB - SG ANGL. DEV. = 8.9 DEGREES REMARK 500 TRP A 294 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 TRP A 294 CD1 - NE1 - CE2 ANGL. DEV. = 8.8 DEGREES REMARK 500 TRP A 294 NE1 - CE2 - CZ2 ANGL. DEV. = 7.5 DEGREES REMARK 500 TRP A 294 NE1 - CE2 - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 313 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 TRP A 315 CD1 - NE1 - CE2 ANGL. DEV. = 7.6 DEGREES REMARK 500 TRP A 315 NE1 - CE2 - CZ2 ANGL. DEV. = 8.3 DEGREES REMARK 500 TRP A 315 NE1 - CE2 - CD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 353 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 GLU A 358 CB - CA - C ANGL. DEV. = -13.4 DEGREES REMARK 500 SER B 30 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 TRP B 137 CG - CD1 - NE1 ANGL. DEV. = -6.6 DEGREES REMARK 500 TRP B 137 CD1 - NE1 - CE2 ANGL. DEV. = 7.7 DEGREES REMARK 500 TRP B 137 NE1 - CE2 - CZ2 ANGL. DEV. = 7.4 DEGREES REMARK 500 TRP B 141 CG - CD1 - NE1 ANGL. DEV. = -6.9 DEGREES REMARK 500 TRP B 141 CD1 - NE1 - CE2 ANGL. DEV. = 8.3 DEGREES REMARK 500 TRP B 141 NE1 - CE2 - CZ2 ANGL. DEV. = 9.0 DEGREES REMARK 500 TRP B 141 NE1 - CE2 - CD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 CYS B 244 CA - CB - SG ANGL. DEV. = 11.9 DEGREES REMARK 500 ASP B 267 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 CYS B 287 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 TRP B 294 CG - CD1 - NE1 ANGL. DEV. = -6.8 DEGREES REMARK 500 TRP B 294 CD1 - NE1 - CE2 ANGL. DEV. = 8.4 DEGREES REMARK 500 TRP B 294 NE1 - CE2 - CZ2 ANGL. DEV. = 8.4 DEGREES REMARK 500 TRP B 294 NE1 - CE2 - CD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASN B 307 N - CA - C ANGL. DEV. = -19.1 DEGREES REMARK 500 ARG B 313 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 TRP B 315 CD1 - NE1 - CE2 ANGL. DEV. = 7.2 DEGREES REMARK 500 TRP B 315 NE1 - CE2 - CZ2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ASP B 333 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG B 353 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 28 38.95 -87.32 REMARK 500 ASP A 29 31.78 -151.39 REMARK 500 SER A 30 -86.79 -109.64 REMARK 500 LEU A 31 121.25 -13.64 REMARK 500 ALA A 32 -39.13 -9.22 REMARK 500 LYS A 36 62.60 -108.65 REMARK 500 SER A 83 -26.86 -31.68 REMARK 500 ILE A 108 -45.83 -23.23 REMARK 500 ASP A 128 42.28 -83.51 REMARK 500 PHE A 152 29.20 39.38 REMARK 500 ASN A 156 74.16 -106.96 REMARK 500 SER A 190 27.11 -77.00 REMARK 500 PRO A 205 101.87 -44.69 REMARK 500 TYR A 224 4.10 83.04 REMARK 500 PHE A 255 -25.09 -154.96 REMARK 500 ASN A 256 79.81 35.28 REMARK 500 ALA A 266 55.74 -95.31 REMARK 500 ASP A 272 135.56 -38.48 REMARK 500 CYS A 275 62.44 38.66 REMARK 500 SER A 276 -52.32 -124.07 REMARK 500 GLN A 295 31.89 76.52 REMARK 500 TYR A 306 32.81 -91.76 REMARK 500 LEU A 308 -74.22 -21.05 REMARK 500 PRO A 332 173.70 -50.91 REMARK 500 CYS B 28 -7.14 -57.27 REMARK 500 SER B 30 -72.84 -121.37 REMARK 500 LEU B 31 88.04 2.21 REMARK 500 ALA B 32 -62.59 28.46 REMARK 500 LYS B 36 32.87 -47.58 REMARK 500 SER B 83 -17.08 -46.53 REMARK 500 THR B 105 -149.56 -124.93 REMARK 500 ILE B 108 -46.19 -22.11 REMARK 500 TRP B 141 58.39 -90.61 REMARK 500 HIS B 142 6.23 -58.95 REMARK 500 PHE B 152 -1.83 71.66 REMARK 500 ARG B 166 11.57 -67.45 REMARK 500 LEU B 179 -37.40 -28.19 REMARK 500 PRO B 205 102.92 -37.74 REMARK 500 ASP B 237 -39.30 -22.76 REMARK 500 ASN B 256 74.54 38.38 REMARK 500 ALA B 266 45.14 -85.44 REMARK 500 ASP B 272 125.43 -4.36 REMARK 500 CYS B 275 47.56 31.73 REMARK 500 PRO B 332 172.68 -48.97 REMARK 500 TYR B 344 56.99 9.44 REMARK 500 PRO B 350 168.98 -49.67 REMARK 500 LEU B 373 23.14 -77.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 208 PRO A 209 -35.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 37 0.20 SIDE_CHAIN REMARK 500 ARG A 55 0.27 SIDE_CHAIN REMARK 500 ARG A 164 0.11 SIDE_CHAIN REMARK 500 ARG A 166 0.24 SIDE_CHAIN REMARK 500 ARG A 167 0.30 SIDE_CHAIN REMARK 500 ARG A 171 0.31 SIDE_CHAIN REMARK 500 ARG A 223 0.08 SIDE_CHAIN REMARK 500 ARG A 313 0.18 SIDE_CHAIN REMARK 500 ARG A 356 0.31 SIDE_CHAIN REMARK 500 ARG A 361 0.11 SIDE_CHAIN REMARK 500 ARG B 55 0.31 SIDE_CHAIN REMARK 500 ARG B 171 0.22 SIDE_CHAIN REMARK 500 ARG B 223 0.09 SIDE_CHAIN REMARK 500 ARG B 313 0.32 SIDE_CHAIN REMARK 500 ARG B 353 0.25 SIDE_CHAIN REMARK 500 ARG B 356 0.22 SIDE_CHAIN REMARK 500 ARG B 361 0.29 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 429 DISTANCE = 5.01 ANGSTROMS REMARK 525 HOH B 455 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH B 467 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A 479 DISTANCE = 5.13 ANGSTROMS REMARK 525 HOH A 494 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH B 494 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH B 498 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 508 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A 515 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH B 517 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH A 520 DISTANCE = 5.49 ANGSTROMS REMARK 525 HOH A 523 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH A 529 DISTANCE = 5.90 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 178 OD1 REMARK 620 2 ASP A 178 OD2 51.2 REMARK 620 3 HIS A 180 ND1 147.5 96.7 REMARK 620 4 ASP A 267 OD2 77.8 91.7 113.2 REMARK 620 5 CRI A 402 O 125.5 165.1 83.7 101.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 240 OH REMARK 620 2 LEU A 177 O 92.9 REMARK 620 3 ASP A 178 O 151.0 70.4 REMARK 620 4 LEU A 200 O 108.3 120.1 64.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CRI B 402 OH REMARK 620 2 CRI B 402 N 32.3 REMARK 620 3 CRI B 402 O 87.2 56.9 REMARK 620 4 ASP B 267 OD2 165.2 152.5 95.7 REMARK 620 5 HIS B 180 ND1 107.6 93.3 86.8 87.1 REMARK 620 6 ASP B 178 OD2 92.2 122.8 178.7 84.5 94.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 178 O REMARK 620 2 LEU B 200 O 98.6 REMARK 620 3 ASP B 176 O 118.4 83.1 REMARK 620 4 ASP B 176 OD1 88.0 150.5 68.6 REMARK 620 5 HIS B 180 O 67.2 129.7 146.9 79.4 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 400 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 400 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 401 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 401 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRI A 402 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRI B 402
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T64 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN HDAC8 COMPLEXED WITH REMARK 900 TRICHOSTATIN A REMARK 900 RELATED ID: 1T67 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN HDAC8 COMPLEXED WITH MS-344 REMARK 900 RELATED ID: 1T69 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HDAC8 COMPLEXED WITH SAHA
DBREF 1VKG A 1 377 UNP Q9BY41 HDAC8_HUMAN 1 377 DBREF 1VKG B 1 377 UNP Q9BY41 HDAC8_HUMAN 1 377
SEQRES 1 A 377 MET GLU GLU PRO GLU GLU PRO ALA ASP SER GLY GLN SER SEQRES 2 A 377 LEU VAL PRO VAL TYR ILE TYR SER PRO GLU TYR VAL SER SEQRES 3 A 377 MET CYS ASP SER LEU ALA LYS ILE PRO LYS ARG ALA SER SEQRES 4 A 377 MET VAL HIS SER LEU ILE GLU ALA TYR ALA LEU HIS LYS SEQRES 5 A 377 GLN MET ARG ILE VAL LYS PRO LYS VAL ALA SER MET GLU SEQRES 6 A 377 GLU MET ALA THR PHE HIS THR ASP ALA TYR LEU GLN HIS SEQRES 7 A 377 LEU GLN LYS VAL SER GLN GLU GLY ASP ASP ASP HIS PRO SEQRES 8 A 377 ASP SER ILE GLU TYR GLY LEU GLY TYR ASP CYS PRO ALA SEQRES 9 A 377 THR GLU GLY ILE PHE ASP TYR ALA ALA ALA ILE GLY GLY SEQRES 10 A 377 ALA THR ILE THR ALA ALA GLN CYS LEU ILE ASP GLY MET SEQRES 11 A 377 CYS LYS VAL ALA ILE ASN TRP SER GLY GLY TRP HIS HIS SEQRES 12 A 377 ALA LYS LYS ASP GLU ALA SER GLY PHE CYS TYR LEU ASN SEQRES 13 A 377 ASP ALA VAL LEU GLY ILE LEU ARG LEU ARG ARG LYS PHE SEQRES 14 A 377 GLU ARG ILE LEU TYR VAL ASP LEU ASP LEU HIS HIS GLY SEQRES 15 A 377 ASP GLY VAL GLU ASP ALA PHE SER PHE THR SER LYS VAL SEQRES 16 A 377 MET THR VAL SER LEU HIS LYS PHE SER PRO GLY PHE PHE SEQRES 17 A 377 PRO GLY THR GLY ASP VAL SER ASP VAL GLY LEU GLY LYS SEQRES 18 A 377 GLY ARG TYR TYR SER VAL ASN VAL PRO ILE GLN ASP GLY SEQRES 19 A 377 ILE GLN ASP GLU LYS TYR TYR GLN ILE CYS GLU SER VAL SEQRES 20 A 377 LEU LYS GLU VAL TYR GLN ALA PHE ASN PRO LYS ALA VAL SEQRES 21 A 377 VAL LEU GLN LEU GLY ALA ASP THR ILE ALA GLY ASP PRO SEQRES 22 A 377 MET CYS SER PHE ASN MET THR PRO VAL GLY ILE GLY LYS SEQRES 23 A 377 CYS LEU LYS TYR ILE LEU GLN TRP GLN LEU ALA THR LEU SEQRES 24 A 377 ILE LEU GLY GLY GLY GLY TYR ASN LEU ALA ASN THR ALA SEQRES 25 A 377 ARG CYS TRP THR TYR LEU THR GLY VAL ILE LEU GLY LYS SEQRES 26 A 377 THR LEU SER SER GLU ILE PRO ASP HIS GLU PHE PHE THR SEQRES 27 A 377 ALA TYR GLY PRO ASP TYR VAL LEU GLU ILE THR PRO SER SEQRES 28 A 377 CYS ARG PRO ASP ARG ASN GLU PRO HIS ARG ILE GLN GLN SEQRES 29 A 377 ILE LEU ASN TYR ILE LYS GLY ASN LEU LYS HIS VAL VAL SEQRES 1 B 377 MET GLU GLU PRO GLU GLU PRO ALA ASP SER GLY GLN SER SEQRES 2 B 377 LEU VAL PRO VAL TYR ILE TYR SER PRO GLU TYR VAL SER SEQRES 3 B 377 MET CYS ASP SER LEU ALA LYS ILE PRO LYS ARG ALA SER SEQRES 4 B 377 MET VAL HIS SER LEU ILE GLU ALA TYR ALA LEU HIS LYS SEQRES 5 B 377 GLN MET ARG ILE VAL LYS PRO LYS VAL ALA SER MET GLU SEQRES 6 B 377 GLU MET ALA THR PHE HIS THR ASP ALA TYR LEU GLN HIS SEQRES 7 B 377 LEU GLN LYS VAL SER GLN GLU GLY ASP ASP ASP HIS PRO SEQRES 8 B 377 ASP SER ILE GLU TYR GLY LEU GLY TYR ASP CYS PRO ALA SEQRES 9 B 377 THR GLU GLY ILE PHE ASP TYR ALA ALA ALA ILE GLY GLY SEQRES 10 B 377 ALA THR ILE THR ALA ALA GLN CYS LEU ILE ASP GLY MET SEQRES 11 B 377 CYS LYS VAL ALA ILE ASN TRP SER GLY GLY TRP HIS HIS SEQRES 12 B 377 ALA LYS LYS ASP GLU ALA SER GLY PHE CYS TYR LEU ASN SEQRES 13 B 377 ASP ALA VAL LEU GLY ILE LEU ARG LEU ARG ARG LYS PHE SEQRES 14 B 377 GLU ARG ILE LEU TYR VAL ASP LEU ASP LEU HIS HIS GLY SEQRES 15 B 377 ASP GLY VAL GLU ASP ALA PHE SER PHE THR SER LYS VAL SEQRES 16 B 377 MET THR VAL SER LEU HIS LYS PHE SER PRO GLY PHE PHE SEQRES 17 B 377 PRO GLY THR GLY ASP VAL SER ASP VAL GLY LEU GLY LYS SEQRES 18 B 377 GLY ARG TYR TYR SER VAL ASN VAL PRO ILE GLN ASP GLY SEQRES 19 B 377 ILE GLN ASP GLU LYS TYR TYR GLN ILE CYS GLU SER VAL SEQRES 20 B 377 LEU LYS GLU VAL TYR GLN ALA PHE ASN PRO LYS ALA VAL SEQRES 21 B 377 VAL LEU GLN LEU GLY ALA ASP THR ILE ALA GLY ASP PRO SEQRES 22 B 377 MET CYS SER PHE ASN MET THR PRO VAL GLY ILE GLY LYS SEQRES 23 B 377 CYS LEU LYS TYR ILE LEU GLN TRP GLN LEU ALA THR LEU SEQRES 24 B 377 ILE LEU GLY GLY GLY GLY TYR ASN LEU ALA ASN THR ALA SEQRES 25 B 377 ARG CYS TRP THR TYR LEU THR GLY VAL ILE LEU GLY LYS SEQRES 26 B 377 THR LEU SER SER GLU ILE PRO ASP HIS GLU PHE PHE THR SEQRES 27 B 377 ALA TYR GLY PRO ASP TYR VAL LEU GLU ILE THR PRO SER SEQRES 28 B 377 CYS ARG PRO ASP ARG ASN GLU PRO HIS ARG ILE GLN GLN SEQRES 29 B 377 ILE LEU ASN TYR ILE LYS GLY ASN LEU LYS HIS VAL VAL
HET ZN A 400 1 HET ZN B 400 1 HET NA B 401 1 HET NA A 401 1 HET CRI A 402 53 HET CRI B 402 53
HETNAM ZN ZINC ION HETNAM NA SODIUM ION HETNAM CRI 5-(4-METHYL-BENZOYLAMINO)-BIPHENYL-3,4'-DICARBOXYLIC HETNAM 2 CRI ACID 3-DIMETHYLAMIDE-4'-HYDROXYAMIDE
FORMUL 3 ZN 2(ZN 2+) FORMUL 5 NA 2(NA 1+) FORMUL 7 CRI 2(C24 H23 N3 O4) FORMUL 9 HOH *244(H2 O)
HELIX 1 1 SER A 21 CYS A 28 1 8 HELIX 2 2 LYS A 36 TYR A 48 1 13 HELIX 3 3 ALA A 49 MET A 54 5 6 HELIX 4 4 SER A 63 ALA A 68 1 6 HELIX 5 5 THR A 72 GLY A 86 1 15 HELIX 6 6 GLY A 107 ASP A 128 1 22 HELIX 7 7 ASN A 156 ARG A 167 1 12 HELIX 8 8 GLY A 182 PHE A 189 1 8 HELIX 9 9 GLN A 236 ALA A 254 1 19 HELIX 10 10 THR A 280 GLN A 293 1 14 HELIX 11 11 ASN A 307 GLY A 324 1 18 HELIX 12 12 PHE A 336 TYR A 340 5 5 HELIX 13 13 GLU A 358 LYS A 374 1 17 HELIX 14 14 SER B 21 ASP B 29 1 9 HELIX 15 15 LYS B 36 TYR B 48 1 13 HELIX 16 16 LEU B 50 MET B 54 5 5 HELIX 17 17 SER B 63 THR B 69 1 7 HELIX 18 18 THR B 72 GLY B 86 1 15 HELIX 19 19 GLY B 107 ASP B 128 1 22 HELIX 20 20 ASN B 156 ARG B 166 1 11 HELIX 21 21 ASP B 183 SER B 190 1 8 HELIX 22 22 LEU B 219 ARG B 223 5 5 HELIX 23 23 GLN B 236 ASN B 256 1 21 HELIX 24 24 THR B 280 TRP B 294 1 15 HELIX 25 25 ASN B 307 GLY B 324 1 18 HELIX 26 26 PHE B 337 GLY B 341 5 5 HELIX 27 27 GLU B 358 LEU B 373 1 16
SHEET 1 A 8 ARG A 55 VAL A 57 0 SHEET 2 A 8 VAL A 17 ILE A 19 1 N TYR A 18 O ARG A 55 SHEET 3 A 8 VAL A 133 ASN A 136 1 O ILE A 135 N ILE A 19 SHEET 4 A 8 ALA A 297 LEU A 301 1 O ILE A 300 N ASN A 136 SHEET 5 A 8 ALA A 259 GLN A 263 1 N VAL A 260 O ALA A 297 SHEET 6 A 8 ILE A 172 ASP A 176 1 N VAL A 175 O VAL A 261 SHEET 7 A 8 VAL A 195 LYS A 202 1 O MET A 196 N ILE A 172 SHEET 8 A 8 SER A 226 ILE A 231 1 O VAL A 227 N THR A 197 SHEET 1 B 2 GLY A 218 LEU A 219 0 SHEET 2 B 2 GLY A 222 ARG A 223 -1 O GLY A 222 N LEU A 219 SHEET 1 C 8 ARG B 55 VAL B 57 0 SHEET 2 C 8 VAL B 17 ILE B 19 1 N TYR B 18 O ARG B 55 SHEET 3 C 8 VAL B 133 ASN B 136 1 O ILE B 135 N VAL B 17 SHEET 4 C 8 ALA B 297 LEU B 301 1 O ILE B 300 N ALA B 134 SHEET 5 C 8 ALA B 259 GLN B 263 1 N LEU B 262 O LEU B 299 SHEET 6 C 8 ILE B 172 ASP B 176 1 N VAL B 175 O GLN B 263 SHEET 7 C 8 VAL B 195 LYS B 202 1 O VAL B 198 N TYR B 174 SHEET 8 C 8 SER B 226 ILE B 231 1 O VAL B 227 N THR B 197
SSBOND 1 CYS A 244 CYS A 287 1555 1555 2.06 SSBOND 2 CYS B 244 CYS B 287 1555 1555 2.07
LINK ZN ZN A 400 OD1 ASP A 178 1555 1555 2.71 LINK ZN ZN A 400 OD2 ASP A 178 1555 1555 2.03 LINK ZN ZN A 400 ND1 HIS A 180 1555 1555 2.00 LINK ZN ZN A 400 OD2 ASP A 267 1555 1555 2.13 LINK ZN ZN A 400 O CRI A 402 1555 1555 1.80 LINK NA NA A 401 OH TYR A 240 1555 1555 2.46 LINK NA NA A 401 O LEU A 177 1555 1555 2.50 LINK ZN ZN B 400 OH CRI B 402 1555 1555 1.97 LINK ZN ZN B 400 N CRI B 402 1555 1555 2.61 LINK ZN ZN B 400 O CRI B 402 1555 1555 1.91 LINK ZN ZN B 400 OD2 ASP B 267 1555 1555 2.11 LINK ZN ZN B 400 ND1 HIS B 180 1555 1555 2.28 LINK ZN ZN B 400 OD2 ASP B 178 1555 1555 2.06 LINK NA NA B 401 O ASP B 178 1555 1555 2.45 LINK NA NA B 401 O LEU B 200 1555 1555 2.33 LINK O ASP A 178 NA NA A 401 1555 1555 2.88 LINK O LEU A 200 NA NA A 401 1555 1555 2.95 LINK O ASP B 176 NA NA B 401 1555 1555 2.68 LINK OD1 ASP B 176 NA NA B 401 1555 1555 2.64 LINK O HIS B 180 NA NA B 401 1555 1555 2.60
CISPEP 1 GLY A 341 PRO A 342 0 -24.59 CISPEP 2 PHE B 208 PRO B 209 0 -14.56 CISPEP 3 GLY B 341 PRO B 342 0 11.66
SITE 1 AC1 4 ASP A 178 HIS A 180 ASP A 267 CRI A 402 SITE 1 AC2 4 ASP B 178 HIS B 180 ASP B 267 CRI B 402 SITE 1 AC3 6 ASP B 176 ASP B 178 HIS B 180 SER B 199 SITE 2 AC3 6 LEU B 200 HIS B 201 SITE 1 AC4 5 LEU A 177 ASP A 178 LEU A 200 TYR A 240 SITE 2 AC4 5 THR A 268 SITE 1 AC5 15 HIS A 142 HIS A 143 PHE A 152 ASP A 178 SITE 2 AC5 15 HIS A 180 PHE A 208 ASP A 267 TYR A 306 SITE 3 AC5 15 ZN A 400 HOH A 478 PHE B 152 PRO B 273 SITE 4 AC5 15 MET B 274 TYR B 306 CRI B 402 SITE 1 AC6 11 PRO A 273 CRI A 402 HIS B 142 HIS B 143 SITE 2 AC6 11 PHE B 152 ASP B 178 HIS B 180 PHE B 208 SITE 3 AC6 11 ASP B 267 TYR B 306 ZN B 400
CRYST1 82.630 92.710 98.760 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012102 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010786 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010126 0.00000