1VBO - Header Asymmetric Unit

HEADER PLANT PROTEIN 28-FEB-04 1VBO

TITLE CRYSTAL STRUCTURE OF ARTOCARPIN-MANNOTRIOSE COMPLEX

CAVEAT 1VBO THERE ARE THREE CHIRALITY ERRORS IN CHAIN B AND D

COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARTOCARPIN; COMPND 3 CHAIN: A, B, C, D, E, F, G, H

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTOCARPUS INTEGER; SOURCE 3 ORGANISM_TAXID: 3490; SOURCE 4 TISSUE: SEEDS

KEYWDS BETA-PRISM, MANNOSE-SPECIFIC, LECTIN, JACALIN-LIKE, PLANT KEYWDS 2 PROTEIN

EXPDTA X-RAY DIFFRACTION

AUTHOR A.A.JEYAPRAKASH,A.SRIVASTAV,A.SUROLIA,M.VIJAYAN

REVDAT 2 24-FEB-09 1VBO 1 VERSN REVDAT 1 15-JUN-04 1VBO 0

JRNL AUTH A.A.JEYAPRAKASH,A.SRIVASTAV,A.SUROLIA,M.VIJAYAN JRNL TITL STRUCTURAL BASIS FOR THE CARBOHYDRATE JRNL TITL 2 SPECIFICITIES OF ARTOCARPIN: VARIATION IN THE JRNL TITL 3 LENGTH OF A LOOP AS A STRATEGY FOR GENERATING JRNL TITL 4 LIGAND SPECIFICITY JRNL REF J.MOL.BIOL. V. 338 757 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15099743 JRNL DOI 10.1016/J.JMB.2004.03.040

REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.V.PRATAP,A.A.JEYAPRAKASH,P.G.RANI,K.SEKAR, REMARK 1 AUTH 2 A.SUROLIA,M.VIJAYAN REMARK 1 TITL CRYSTAL STRUCTURES OF ARTOCARPIN, A MORACEAE REMARK 1 TITL 2 LECTIN WITH MANNOSE SPECIFICITY, AND ITS COMPLEX REMARK 1 TITL 3 WITH METHYL-ALPHA-D-MANNOSE: IMPLICATIONS TO THE REMARK 1 TITL 4 GENERATION OF CARBOHYDRATE SPECIFICITY REMARK 1 REF J.MOL.BIOL. V. 317 237 2002 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 11902840 REMARK 1 DOI 10.1006/JMBI.2001.5432 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.SANKARANARAYANAN,K.SEKAR,R.BANERJEE,V.SHARMA, REMARK 1 AUTH 2 A.SUROLIA,M.VIJAYAN REMARK 1 TITL A NOVEL MODE OF CARBOHYDRATE RECOGNITION IN REMARK 1 TITL 2 JACALIN, A MORACEAE PLANT LECTIN WITH A BETA-PRISM REMARK 1 TITL 3 FOLD REMARK 1 REF NAT.STRUCT.BIOL. V. 3 596 1996 REMARK 1 REFN ISSN 1072-8368 REMARK 1 PMID 8673603 REMARK 1 DOI 10.1038/NSB0796-596 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.A.JEYAPRAKASH,S.KATIYAR,C.P.SWAMINATHAN,K.SEKAR, REMARK 1 AUTH 2 A.SUROLIA,M.VIJAYAN REMARK 1 TITL STRUCTURAL BASIS OF THE CARBOHYDRATE SPECIFICITIES REMARK 1 TITL 2 OF JACALIN: AN X-RAY AND MODELING STUDY REMARK 1 REF J.MOL.BIOL. V. 332 217 2003 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 12946359 REMARK 1 DOI 10.1016/S0022-2836(03)00901-X

REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1485698.720 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 48504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2417 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.50 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7623 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE : 0.3300 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 409 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9128 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 228 REMARK 3 SOLVENT ATOMS : 490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.26000 REMARK 3 B22 (A**2) : 3.15000 REMARK 3 B33 (A**2) : 3.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.54000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.35 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.40 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 3.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.75 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.240 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.060 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.910 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.860 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 32.31 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 4 : CIS4.PARAM REMARK 3 PARAMETER FILE 5 : AYA_XPLOR_PARAM.TXT REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1VBO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-MAR-04. REMARK 100 THE RCSB ID CODE IS RCSB006437.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 278 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48504 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1J4U REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, PEG1450, PHOSPHATE BUFFER, REMARK 280 PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 300K

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.14800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O6 MAN G 406 O5 MAN G 407 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 8 C PRO A 9 N 0.265 REMARK 500 GLY B 8 C PRO B 9 N 0.310 REMARK 500 ALA B 90 CA ALA B 90 C 0.272 REMARK 500 THR B 91 N THR B 91 CA -0.433 REMARK 500 THR B 91 CA THR B 91 CB 0.275 REMARK 500 THR B 91 CA THR B 91 C -0.237 REMARK 500 PRO C 9 N PRO C 9 CA -0.125 REMARK 500 PRO C 9 CD PRO C 9 N 0.085 REMARK 500 GLY C 8 C PRO C 9 N 0.228 REMARK 500 GLY D 8 C PRO D 9 N 0.266 REMARK 500 ALA D 90 N ALA D 90 CA 0.252 REMARK 500 THR D 91 N THR D 91 CA -0.408 REMARK 500 THR D 91 CA THR D 91 CB -0.202 REMARK 500 PRO D 92 CA PRO D 92 C -0.318 REMARK 500 PRO E 9 CA PRO E 9 C -0.248 REMARK 500 GLY E 8 C PRO E 9 N 0.210 REMARK 500 THR E 91 C PRO E 92 N 0.284 REMARK 500 GLY F 8 C PRO F 9 N 0.398 REMARK 500 ASP F 138 CA ASP F 138 CB -0.294 REMARK 500 ASP F 138 C ASP F 138 O 0.160 REMARK 500 ASP F 138 C LEU F 139 N -0.335 REMARK 500 GLY G 8 C PRO G 9 N 0.256 REMARK 500 GLY H 8 C PRO H 9 N 0.336 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 8 O - C - N ANGL. DEV. = -20.3 DEGREES REMARK 500 SER A 41 CB - CA - C ANGL. DEV. = -14.4 DEGREES REMARK 500 VAL A 79 CB - CA - C ANGL. DEV. = 13.8 DEGREES REMARK 500 PRO A 111 C - N - CA ANGL. DEV. = 35.5 DEGREES REMARK 500 PRO A 111 C - N - CD ANGL. DEV. = -41.2 DEGREES REMARK 500 LEU A 139 CB - CA - C ANGL. DEV. = 34.2 DEGREES REMARK 500 GLY B 8 O - C - N ANGL. DEV. = -12.1 DEGREES REMARK 500 PRO B 9 C - N - CA ANGL. DEV. = 16.3 DEGREES REMARK 500 PRO B 9 C - N - CD ANGL. DEV. = -17.2 DEGREES REMARK 500 SER B 87 N - CA - CB ANGL. DEV. = 10.5 DEGREES REMARK 500 SER B 87 N - CA - C ANGL. DEV. = -29.4 DEGREES REMARK 500 PHE B 86 CA - C - N ANGL. DEV. = 18.5 DEGREES REMARK 500 PHE B 86 O - C - N ANGL. DEV. = -12.8 DEGREES REMARK 500 SER B 87 C - N - CA ANGL. DEV. = 40.1 DEGREES REMARK 500 ALA B 90 CA - C - O ANGL. DEV. = -17.1 DEGREES REMARK 500 THR B 91 N - CA - CB ANGL. DEV. = -32.1 DEGREES REMARK 500 THR B 91 CA - CB - CG2 ANGL. DEV. = -13.3 DEGREES REMARK 500 THR B 91 N - CA - C ANGL. DEV. = 23.3 DEGREES REMARK 500 THR B 91 CA - C - O ANGL. DEV. = -21.7 DEGREES REMARK 500 THR B 91 CA - C - N ANGL. DEV. = 32.7 DEGREES REMARK 500 PRO B 111 C - N - CA ANGL. DEV. = 52.6 DEGREES REMARK 500 PRO B 111 C - N - CD ANGL. DEV. = -46.6 DEGREES REMARK 500 LEU B 122 CA - CB - CG ANGL. DEV. = 19.2 DEGREES REMARK 500 LEU B 139 CB - CA - C ANGL. DEV. = 14.7 DEGREES REMARK 500 LEU B 139 CA - CB - CG ANGL. DEV. = 31.2 DEGREES REMARK 500 GLY C 8 N - CA - C ANGL. DEV. = 15.7 DEGREES REMARK 500 PRO C 9 CB - CA - C ANGL. DEV. = -16.8 DEGREES REMARK 500 PRO C 9 N - CA - C ANGL. DEV. = 25.7 DEGREES REMARK 500 GLY C 8 O - C - N ANGL. DEV. = -16.8 DEGREES REMARK 500 ILE C 37 CB - CG1 - CD1 ANGL. DEV. = 32.5 DEGREES REMARK 500 LYS C 70 CG - CD - CE ANGL. DEV. = 26.7 DEGREES REMARK 500 LYS C 70 CD - CE - NZ ANGL. DEV. = 23.2 DEGREES REMARK 500 ASP C 73 CA - CB - CG ANGL. DEV. = 13.8 DEGREES REMARK 500 THR C 91 CB - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 THR C 103 N - CA - CB ANGL. DEV. = 15.3 DEGREES REMARK 500 PRO C 111 C - N - CA ANGL. DEV. = 52.2 DEGREES REMARK 500 PRO C 111 C - N - CD ANGL. DEV. = -46.9 DEGREES REMARK 500 GLU C 115 CA - CB - CG ANGL. DEV. = -16.3 DEGREES REMARK 500 LEU C 139 CB - CA - C ANGL. DEV. = 25.6 DEGREES REMARK 500 GLY D 8 CA - C - N ANGL. DEV. = 19.7 DEGREES REMARK 500 GLY D 8 O - C - N ANGL. DEV. = -22.2 DEGREES REMARK 500 ILE D 37 CB - CG1 - CD1 ANGL. DEV. = 24.7 DEGREES REMARK 500 LYS D 70 CB - CG - CD ANGL. DEV. = -21.1 DEGREES REMARK 500 LYS D 70 CD - CE - NZ ANGL. DEV. = 51.4 DEGREES REMARK 500 ASP D 73 CB - CA - C ANGL. DEV. = 25.5 DEGREES REMARK 500 VAL D 79 N - CA - CB ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU D 89 CB - CA - C ANGL. DEV. = -15.5 DEGREES REMARK 500 ALA D 90 N - CA - CB ANGL. DEV. = -15.0 DEGREES REMARK 500 ALA D 90 N - CA - C ANGL. DEV. = 39.5 DEGREES REMARK 500 ALA D 90 CA - C - O ANGL. DEV. = -13.2 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 118 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 34 -96.56 -162.26 REMARK 500 ALA A 88 -8.81 -58.87 REMARK 500 PRO A 111 110.87 -16.42 REMARK 500 TYR B 23 -158.60 -136.66 REMARK 500 LYS B 34 -96.84 -160.92 REMARK 500 SER B 87 -69.10 150.69 REMARK 500 PRO B 111 108.45 174.35 REMARK 500 PRO C 9 142.97 -39.50 REMARK 500 TYR C 23 -158.56 -136.10 REMARK 500 LYS C 34 -96.09 -160.42 REMARK 500 PRO C 111 107.37 169.20 REMARK 500 TYR D 23 -157.23 -136.54 REMARK 500 LYS D 34 -97.72 -160.58 REMARK 500 ALA D 90 35.34 11.83 REMARK 500 THR D 91 144.24 -35.72 REMARK 500 PRO D 92 -99.02 -1.78 REMARK 500 PRO D 111 111.60 -14.05 REMARK 500 TYR E 23 -157.17 -137.06 REMARK 500 LYS E 34 -97.16 -161.58 REMARK 500 HIS E 56 68.36 -118.91 REMARK 500 PRO E 94 138.67 11.62 REMARK 500 PRO E 111 107.33 178.14 REMARK 500 TYR F 23 -158.15 -136.56 REMARK 500 LYS F 34 -95.91 -161.05 REMARK 500 PRO F 111 107.68 -9.44 REMARK 500 TYR G 23 -159.84 -137.96 REMARK 500 LYS G 34 -96.14 -160.26 REMARK 500 PRO G 111 110.90 -21.75 REMARK 500 TYR H 23 -159.42 -137.44 REMARK 500 LYS H 34 -97.07 -159.79 REMARK 500 PRO H 111 113.43 -17.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 90 THR B 91 106.87 REMARK 500 GLY C 8 PRO C 9 -57.25 REMARK 500 ALA D 90 THR D 91 119.00 REMARK 500 THR D 91 PRO D 92 104.60 REMARK 500 GLY E 8 PRO E 9 55.34 REMARK 500 PRO E 92 THR E 93 -118.58 REMARK 500 THR E 93 PRO E 94 -81.68 REMARK 500 GLY F 8 PRO F 9 -48.36 REMARK 500 GLY G 8 PRO G 9 60.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 27 0.22 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ALA B 90 26.98 REMARK 500 THR B 91 15.35 REMARK 500 GLY C 8 -13.05 REMARK 500 ALA D 90 -15.42 REMARK 500 THR D 91 -33.46 REMARK 500 GLY E 8 19.52 REMARK 500 THR E 93 -19.00 REMARK 500 GLY F 8 -18.07 REMARK 500 GLY G 8 32.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 THR B 91 127.7 ALPHA-CARBON REMARK 500 THR D 91 178.8 ALPHA-CARBON REMARK 500 PRO D 92 151.0 ALPHA-CARBON REMARK 500 REMARK 500 REMARK: NULL

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 405 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 406 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 407 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 405 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 406 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 407 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN C 405 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN C 406 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN C 407 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN D 1405 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN E 405 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN E 406 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN E 407 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN F 2405 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN G 405 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN G 406 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN G 407 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN H 405 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN H 406 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN H 407

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1J4S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ARTOCARPIN FORM I REMARK 900 RELATED ID: 1J4T RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ARTOCARPIN FORM II REMARK 900 RELATED ID: 1J4U RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ARTOCARPIN-METHYL-ALPHA-MANNOSE COMPLEX REMARK 900 RELATED ID: 1VBP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ARTOCARPIN-MANNOPENTOSE COMPLEX

DBREF 1VBO A 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147 DBREF 1VBO B 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147 DBREF 1VBO C 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147 DBREF 1VBO D 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147 DBREF 1VBO E 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147 DBREF 1VBO F 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147 DBREF 1VBO G 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147 DBREF 1VBO H 1 147 UNP Q7M1T4 Q7M1T4_ARTIN 1 147

SEQRES 1 A 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 A 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 A 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 A 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 A 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 A 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 A 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 A 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 A 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 A 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 A 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 A 149 GLY ILE HIS MET SER LEU SEQRES 1 B 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 B 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 B 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 B 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 B 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 B 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 B 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 B 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 B 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 B 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 B 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 B 149 GLY ILE HIS MET SER LEU SEQRES 1 C 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 C 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 C 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 C 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 C 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 C 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 C 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 C 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 C 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 C 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 C 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 C 149 GLY ILE HIS MET SER LEU SEQRES 1 D 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 D 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 D 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 D 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 D 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 D 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 D 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 D 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 D 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 D 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 D 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 D 149 GLY ILE HIS MET SER LEU SEQRES 1 E 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 E 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 E 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 E 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 E 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 E 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 E 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 E 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 E 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 E 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 E 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 E 149 GLY ILE HIS MET SER LEU SEQRES 1 F 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 F 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 F 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 F 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 F 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 F 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 F 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 F 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 F 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 F 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 F 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 F 149 GLY ILE HIS MET SER LEU SEQRES 1 G 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 G 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 G 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 G 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 G 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 G 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 G 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 G 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 G 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 G 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 G 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 G 149 GLY ILE HIS MET SER LEU SEQRES 1 H 149 AYA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY PRO SEQRES 2 H 149 GLY GLY ASN GLY TRP ASP ASP GLY SER TYR THR GLY ILE SEQRES 3 H 149 ARG GLN ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SER SEQRES 4 H 149 PHE SER VAL ILE TYR ASP LEU ASN GLY ASP PRO PHE SER SEQRES 5 H 149 GLY PRO LYS HIS THR SER LYS LEU PRO TYR LYS ASN VAL SEQRES 6 H 149 LYS ILE GLU LEU LYS PHE PRO ASP GLU PHE LEU GLU SER SEQRES 7 H 149 VAL SER GLY TYR THR GLY PRO PHE SER ALA LEU ALA THR SEQRES 8 H 149 PRO THR PRO VAL VAL ARG SER LEU THR PHE LYS THR ASN SEQRES 9 H 149 LYS GLY ARG THR PHE GLY PRO TYR GLY ASP GLU GLU GLY SEQRES 10 H 149 THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU ILE VAL SEQRES 11 H 149 GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA ILE SEQRES 12 H 149 GLY ILE HIS MET SER LEU

MODRES 1VBO AYA A 1 ALA N-ACETYLALANINE MODRES 1VBO AYA B 1 ALA N-ACETYLALANINE MODRES 1VBO AYA C 1 ALA N-ACETYLALANINE MODRES 1VBO AYA D 1 ALA N-ACETYLALANINE MODRES 1VBO AYA E 1 ALA N-ACETYLALANINE MODRES 1VBO AYA F 1 ALA N-ACETYLALANINE MODRES 1VBO AYA G 1 ALA N-ACETYLALANINE MODRES 1VBO AYA H 1 ALA N-ACETYLALANINE

HET AYA A 1 8 HET AYA B 1 8 HET AYA C 1 8 HET AYA D 1 8 HET AYA E 1 8 HET AYA F 1 8 HET AYA G 1 8 HET AYA H 1 8 HET MAN A 405 11 HET MAN A 406 12 HET MAN A 407 11 HET MAN B 405 11 HET MAN B 406 12 HET MAN B 407 11 HET MAN C 405 11 HET MAN C 406 12 HET MAN C 407 11 HET MAN D1405 12 HET MAN E 405 11 HET MAN E 406 12 HET MAN E 407 11 HET MAN F2405 12 HET MAN G 405 11 HET MAN G 406 12 HET MAN G 407 11 HET MAN H 405 11 HET MAN H 406 12 HET MAN H 407 11

HETNAM AYA N-ACETYLALANINE HETNAM MAN ALPHA-D-MANNOSE

FORMUL 1 AYA 8(C5 H9 N O3) FORMUL 9 MAN 20(C6 H12 O6) FORMUL 17 HOH *490(H2 O)

HELIX 1 1 PHE D 86 ALA D 90 5 5

SHEET 1 A 8 ASN A 16 ASP A 19 0 SHEET 2 A 8 LEU A 128 THR A 136 -1 O THR A 136 N ASN A 16 SHEET 3 A 8 LEU A 140 SER A 148 -1 O GLY A 144 N LYS A 133 SHEET 4 A 8 ILE A 5 GLY A 11 -1 N ILE A 5 O MET A 147 SHEET 5 A 8 THR B 118 ASN B 126 -1 O PRO B 123 N GLY A 8 SHEET 6 A 8 LEU B 76 GLY B 84 -1 N VAL B 79 O LEU B 122 SHEET 7 A 8 VAL B 95 THR B 103 -1 O LYS B 102 N GLU B 77 SHEET 8 A 8 THR B 108 GLY B 113 -1 O PHE B 109 N PHE B 101 SHEET 1 B 4 ASP A 49 SER A 52 0 SHEET 2 B 4 ILE A 37 LEU A 46 -1 N LEU A 46 O ASP A 49 SHEET 3 B 4 GLY A 25 TYR A 33 -1 N SER A 32 O GLY A 38 SHEET 4 B 4 LYS A 63 GLU A 68 -1 O ILE A 67 N ILE A 29 SHEET 1 C 8 THR A 108 GLY A 113 0 SHEET 2 C 8 VAL A 95 THR A 103 -1 N PHE A 101 O PHE A 109 SHEET 3 C 8 LEU A 76 GLY A 84 -1 N GLU A 77 O LYS A 102 SHEET 4 C 8 THR A 118 ASN A 126 -1 O LEU A 122 N VAL A 79 SHEET 5 C 8 ILE B 5 GLY B 11 -1 O GLY B 8 N PRO A 123 SHEET 6 C 8 LEU B 140 SER B 148 -1 O MET B 147 N ILE B 5 SHEET 7 C 8 LEU B 128 THR B 136 -1 N LYS B 133 O GLY B 144 SHEET 8 C 8 ASN B 16 ASP B 19 -1 N ASN B 16 O THR B 136 SHEET 1 D 4 ASP B 49 SER B 52 0 SHEET 2 D 4 ILE B 37 LEU B 46 -1 N TYR B 44 O PHE B 51 SHEET 3 D 4 GLY B 25 TYR B 33 -1 N SER B 32 O GLY B 38 SHEET 4 D 4 LYS B 63 GLU B 68 -1 O ILE B 67 N ILE B 29 SHEET 1 E 8 ASN C 16 ASP C 19 0 SHEET 2 E 8 LEU C 128 THR C 136 -1 O THR C 136 N ASN C 16 SHEET 3 E 8 LEU C 140 SER C 148 -1 O GLY C 144 N LYS C 133 SHEET 4 E 8 ILE C 5 GLY C 11 -1 N ILE C 5 O MET C 147 SHEET 5 E 8 THR D 118 ASN D 126 -1 O PRO D 123 N GLY C 8 SHEET 6 E 8 LEU D 76 GLY D 84 -1 N VAL D 79 O LEU D 122 SHEET 7 E 8 VAL D 95 THR D 103 -1 O LYS D 102 N GLU D 77 SHEET 8 E 8 THR D 108 GLY D 113 -1 O PHE D 109 N PHE D 101 SHEET 1 F 4 ASP C 49 SER C 52 0 SHEET 2 F 4 ILE C 37 LEU C 46 -1 N LEU C 46 O ASP C 49 SHEET 3 F 4 GLY C 25 TYR C 33 -1 N GLU C 30 O SER C 41 SHEET 4 F 4 LYS C 63 GLU C 68 -1 O ILE C 67 N ILE C 29 SHEET 1 G 8 THR C 108 GLY C 113 0 SHEET 2 G 8 VAL C 95 THR C 103 -1 N PHE C 101 O PHE C 109 SHEET 3 G 8 LEU C 76 GLY C 84 -1 N GLU C 77 O LYS C 102 SHEET 4 G 8 THR C 118 ASN C 126 -1 O THR C 118 N THR C 83 SHEET 5 G 8 ILE D 5 GLY D 11 -1 O GLY D 8 N PRO C 123 SHEET 6 G 8 LEU D 140 SER D 148 -1 O MET D 147 N ILE D 5 SHEET 7 G 8 LEU D 128 THR D 136 -1 N LYS D 133 O GLY D 144 SHEET 8 G 8 ASN D 16 ASP D 19 -1 N TRP D 18 O GLY D 134 SHEET 1 H 4 ASP D 49 SER D 52 0 SHEET 2 H 4 ILE D 37 LEU D 46 -1 N TYR D 44 O PHE D 51 SHEET 3 H 4 GLY D 25 TYR D 33 -1 N SER D 32 O GLY D 38 SHEET 4 H 4 LYS D 63 GLU D 68 -1 O ILE D 67 N ILE D 29 SHEET 1 I 8 ASN E 16 ASP E 19 0 SHEET 2 I 8 LEU E 128 THR E 136 -1 O GLY E 134 N TRP E 18 SHEET 3 I 8 LEU E 140 SER E 148 -1 O GLY E 144 N LYS E 133 SHEET 4 I 8 ILE E 5 GLY E 11 -1 N ILE E 5 O MET E 147 SHEET 5 I 8 THR F 118 ASN F 126 -1 O PRO F 123 N GLY E 8 SHEET 6 I 8 LEU F 76 GLY F 84 -1 N THR F 83 O THR F 118 SHEET 7 I 8 VAL F 95 THR F 103 -1 O LYS F 102 N GLU F 77 SHEET 8 I 8 THR F 108 GLY F 113 -1 O PHE F 109 N PHE F 101 SHEET 1 J 4 ASP E 49 SER E 52 0 SHEET 2 J 4 ILE E 37 LEU E 46 -1 N TYR E 44 O PHE E 51 SHEET 3 J 4 GLY E 25 TYR E 33 -1 N SER E 32 O GLY E 38 SHEET 4 J 4 LYS E 63 GLU E 68 -1 O ILE E 67 N ILE E 29 SHEET 1 K 8 THR E 108 GLY E 113 0 SHEET 2 K 8 VAL E 95 THR E 103 -1 N PHE E 101 O PHE E 109 SHEET 3 K 8 LEU E 76 GLY E 84 -1 N GLU E 77 O LYS E 102 SHEET 4 K 8 THR E 118 ASN E 126 -1 O THR E 118 N THR E 83 SHEET 5 K 8 ILE F 5 GLY F 11 -1 O GLY F 8 N PRO E 123 SHEET 6 K 8 LEU F 140 SER F 148 -1 O MET F 147 N ILE F 5 SHEET 7 K 8 LEU F 128 THR F 136 -1 N LYS F 133 O GLY F 144 SHEET 8 K 8 ASN F 16 ASP F 19 -1 N TRP F 18 O GLY F 134 SHEET 1 L 4 ASP F 49 SER F 52 0 SHEET 2 L 4 ILE F 37 LEU F 46 -1 N LEU F 46 O ASP F 49 SHEET 3 L 4 GLY F 25 TYR F 33 -1 N SER F 32 O GLY F 38 SHEET 4 L 4 LYS F 63 GLU F 68 -1 O ILE F 67 N ILE F 29 SHEET 1 M 8 ASN G 16 ASP G 19 0 SHEET 2 M 8 LEU G 128 THR G 136 -1 O GLY G 134 N TRP G 18 SHEET 3 M 8 LEU G 140 SER G 148 -1 O GLY G 144 N LYS G 133 SHEET 4 M 8 ILE G 5 GLY G 11 -1 N ILE G 5 O MET G 147 SHEET 5 M 8 THR H 118 ASN H 126 -1 O PRO H 123 N GLY G 8 SHEET 6 M 8 LEU H 76 GLY H 84 -1 N THR H 83 O THR H 118 SHEET 7 M 8 VAL H 95 THR H 103 -1 O LYS H 102 N GLU H 77 SHEET 8 M 8 THR H 108 GLY H 113 -1 O PHE H 109 N PHE H 101 SHEET 1 N 4 ASP G 49 SER G 52 0 SHEET 2 N 4 ILE G 37 LEU G 46 -1 N LEU G 46 O ASP G 49 SHEET 3 N 4 GLY G 25 TYR G 33 -1 N SER G 32 O GLY G 38 SHEET 4 N 4 LYS G 63 GLU G 68 -1 O ILE G 67 N ILE G 29 SHEET 1 O 8 THR G 108 GLY G 113 0 SHEET 2 O 8 VAL G 95 THR G 103 -1 N PHE G 101 O PHE G 109 SHEET 3 O 8 LEU G 76 GLY G 84 -1 N GLU G 77 O LYS G 102 SHEET 4 O 8 THR G 118 ASN G 126 -1 O THR G 118 N THR G 83 SHEET 5 O 8 ILE H 5 GLY H 11 -1 O GLY H 8 N PRO G 123 SHEET 6 O 8 LEU H 140 SER H 148 -1 O MET H 147 N ILE H 5 SHEET 7 O 8 LEU H 128 THR H 136 -1 N LYS H 133 O GLY H 144 SHEET 8 O 8 ASN H 16 ASP H 19 -1 N TRP H 18 O GLY H 134 SHEET 1 P 4 ASP H 49 SER H 52 0 SHEET 2 P 4 ILE H 37 LEU H 46 -1 N LEU H 46 O ASP H 49 SHEET 3 P 4 GLY H 25 TYR H 33 -1 N SER H 32 O GLY H 38 SHEET 4 P 4 LYS H 63 GLU H 68 -1 O ILE H 67 N ILE H 29

LINK C1 MAN A 405 O3 MAN A 406 1555 1555 1.31 LINK O6 MAN A 406 C1 MAN A 407 1555 1555 1.22 LINK C1 MAN B 405 O3 MAN B 406 1555 1555 1.47 LINK O6 MAN B 406 C1 MAN B 407 1555 1555 1.20 LINK C1 MAN C 405 O3 MAN C 406 1555 1555 1.40 LINK O6 MAN C 406 C1 MAN C 407 1555 1555 1.49 LINK C1 MAN E 405 O3 MAN E 406 1555 1555 1.40 LINK O6 MAN E 406 C1 MAN E 407 1555 1555 1.36 LINK C1 MAN G 405 O3 MAN G 406 1555 1555 1.38 LINK O6 MAN G 406 C1 MAN G 407 1555 1555 1.29 LINK C1 MAN H 405 O3 MAN H 406 1555 1555 1.40 LINK O6 MAN H 406 C1 MAN H 407 1555 1555 1.47 LINK C AYA A 1 N SER A 2 1555 1555 1.56 LINK O6 MAN A 406 O5 MAN A 407 1555 1555 2.02 LINK C AYA B 1 N SER B 2 1555 1555 1.58 LINK O6 MAN B 406 O5 MAN B 407 1555 1555 1.96 LINK C AYA C 1 N SER C 2 1555 1555 1.58 LINK O6 MAN C 406 O5 MAN C 407 1555 1555 1.96 LINK C AYA D 1 N SER D 2 1555 1555 1.61 LINK C AYA E 1 N SER E 2 1555 1555 1.56 LINK C AYA F 1 N SER F 2 1555 1555 1.65 LINK C AYA G 1 N SER G 2 1555 1555 1.63 LINK C AYA H 1 N SER H 2 1555 1555 1.65

CISPEP 1 GLY A 8 PRO A 9 0 -15.02 CISPEP 2 PHE A 71 PRO A 72 0 -0.17 CISPEP 3 GLY A 110 PRO A 111 0 5.58 CISPEP 4 GLY B 8 PRO B 9 0 -3.05 CISPEP 5 PHE B 71 PRO B 72 0 0.37 CISPEP 6 PHE B 86 SER B 87 0 -5.19 CISPEP 7 PHE C 71 PRO C 72 0 -0.21 CISPEP 8 GLY D 8 PRO D 9 0 5.31 CISPEP 9 PHE D 71 PRO D 72 0 0.52 CISPEP 10 GLY D 110 PRO D 111 0 2.98 CISPEP 11 PHE E 71 PRO E 72 0 0.15 CISPEP 12 PHE F 71 PRO F 72 0 -0.14 CISPEP 13 GLY F 110 PRO F 111 0 1.85 CISPEP 14 PHE G 71 PRO G 72 0 -0.62 CISPEP 15 GLY G 110 PRO G 111 0 10.85 CISPEP 16 GLY H 8 PRO H 9 0 0.07 CISPEP 17 PHE H 71 PRO H 72 0 -0.34 CISPEP 18 GLY H 110 PRO H 111 0 6.78

SITE 1 AC1 11 GLY A 14 GLY A 15 THR A 91 THR A 93 SITE 2 AC1 11 GLY A 137 ASP A 138 LEU A 139 ASP A 141 SITE 3 AC1 11 MAN A 406 HOH A 434 HOH A 435 SITE 1 AC2 7 LEU A 89 ALA A 90 THR A 91 ASP A 138 SITE 2 AC2 7 MAN A 405 MAN A 407 HOH A 441 SITE 1 AC3 1 MAN A 406 SITE 1 AC4 10 GLY B 14 GLY B 15 THR B 91 THR B 93 SITE 2 AC4 10 GLY B 137 ASP B 138 LEU B 139 ASP B 141 SITE 3 AC4 10 MAN B 406 HOH B 462 SITE 1 AC5 7 LEU B 89 ALA B 90 THR B 91 ASP B 138 SITE 2 AC5 7 MAN B 405 MAN B 407 ASP E 73 SITE 1 AC6 1 MAN B 406 SITE 1 AC7 12 GLY C 14 GLY C 15 THR C 91 THR C 93 SITE 2 AC7 12 GLY C 137 ASP C 138 LEU C 139 ASP C 141 SITE 3 AC7 12 MAN C 406 HOH C 428 HOH C 430 HOH C 459 SITE 1 AC8 7 LEU C 89 ALA C 90 THR C 91 ASP C 138 SITE 2 AC8 7 MAN C 405 MAN C 407 HOH C 449 SITE 1 AC9 5 ALA C 90 MAN C 406 HOH C 465 LYS D 55 SITE 2 AC9 5 THR D 57 SITE 1 BC1 6 GLY D 15 THR D 91 GLY D 137 ASP D 138 SITE 2 BC1 6 LEU D 139 ASP D 141 SITE 1 BC2 11 GLY E 14 GLY E 15 THR E 91 THR E 93 SITE 2 BC2 11 GLY E 137 ASP E 138 LEU E 139 ASP E 141 SITE 3 BC2 11 MAN E 406 HOH E 435 HOH E 443 SITE 1 BC3 5 ALA E 90 THR E 91 ASP E 138 MAN E 405 SITE 2 BC3 5 MAN E 407 SITE 1 BC4 1 MAN E 406 SITE 1 BC5 7 GLY F 15 THR F 91 THR F 93 GLY F 137 SITE 2 BC5 7 ASP F 138 LEU F 139 ASP F 141 SITE 1 BC6 9 GLY G 15 THR G 91 GLY G 137 ASP G 138 SITE 2 BC6 9 LEU G 139 ASP G 141 MAN G 406 HOH G 412 SITE 3 BC6 9 HOH G 413 SITE 1 BC7 7 LEU G 89 ALA G 90 THR G 91 ASP G 138 SITE 2 BC7 7 MAN G 405 MAN G 407 HOH G 439 SITE 1 BC8 3 ALA G 90 MAN G 406 HOH G 448 SITE 1 BC9 11 GLY H 14 GLY H 15 THR H 91 THR H 93 SITE 2 BC9 11 GLY H 137 ASP H 138 LEU H 139 ASP H 141 SITE 3 BC9 11 MAN H 406 HOH H 414 HOH H 445 SITE 1 CC1 7 LEU H 89 ALA H 90 THR H 91 ASP H 138 SITE 2 CC1 7 MAN H 405 MAN H 407 HOH H 437 SITE 1 CC2 4 AYA A 1 PRO C 72 HOH C 481 MAN H 406

CRYST1 138.217 72.296 59.373 90.00 94.48 90.00 P 1 21 1 16

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.007235 0.000000 0.000568 0.00000

SCALE2 0.000000 0.013832 0.000000 0.00000

SCALE3 0.000000 0.000000 0.016894 0.00000