10 20 30 40 50 60 70 80 1V7A - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 14-DEC-03 1V7A
TITLE CRYSTAL STRUCTURES OF ADENOSINE DEAMINASE COMPLEXED WITH TITLE 2 POTENT INHIBITORS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE DEAMINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADENOSINE AMINOHYDROLASE; COMPND 5 EC: 3.5.4.4
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913
KEYWDS BETA BARREL, ZINC, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR T.KINOSHITA
REVDAT 2 24-FEB-09 1V7A 1 VERSN REVDAT 1 21-DEC-04 1V7A 0
JRNL AUTH T.TERASAKA,H.OKUMURA,K.TSUJI,T.KATO,I.NAKANISHI, JRNL AUTH 2 T.KINOSHITA,Y.KATO,M.KUNO,N.SEKI,Y.NAOE,T.INOUE, JRNL AUTH 3 K.TANAKA,K.NAKAMURA JRNL TITL STRUCTURE-BASED DESIGN AND SYNTHESIS OF JRNL TITL 2 NON-NUCLEOSIDE, POTENT, AND ORALLY BIOAVAILABLE JRNL TITL 3 ADENOSINE DEAMINASE INHIBITORS JRNL REF J.MED.CHEM. V. 47 2728 2004 JRNL REFN ISSN 0022-2623 JRNL PMID 15139750 JRNL DOI 10.1021/JM0499559
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 14398 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 689 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 15087 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2789 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1V7A COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-DEC-03. REMARK 100 THE RCSB ID CODE IS RCSB006295.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL24XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8266 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14398 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 8.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUN SULPHATE, PEG400, MES REMARK 280 BUFFER, PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.10000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.76000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.76000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.15000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.76000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.76000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.05000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.76000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.76000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 102.15000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.76000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.76000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.05000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 68.10000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 MET A 353 REMARK 465 PRO A 354 REMARK 465 SER A 355 REMARK 465 PRO A 356 REMARK 465 ALA A 357
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 30 CB - CG - CD2 ANGL. DEV. = -5.3 DEGREES REMARK 500 TYR A 30 CD1 - CG - CD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 TYR A 30 CG - CD2 - CE2 ANGL. DEV. = -5.0 DEGREES REMARK 500 LYS A 32 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 33 CA - CB - CG ANGL. DEV. = -16.9 DEGREES REMARK 500 ARG A 33 NE - CZ - NH1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ILE A 50 C - N - CA ANGL. DEV. = -15.7 DEGREES REMARK 500 ARG A 81 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG A 101 NE - CZ - NH1 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG A 101 NE - CZ - NH2 ANGL. DEV. = 6.9 DEGREES REMARK 500 TYR A 102 CB - CG - CD1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 142 CD - NE - CZ ANGL. DEV. = 9.5 DEGREES REMARK 500 LYS A 147 CB - CA - C ANGL. DEV. = 13.3 DEGREES REMARK 500 VAL A 166 CG1 - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 VAL A 166 CA - CB - CG1 ANGL. DEV. = 13.2 DEGREES REMARK 500 VAL A 209 C - N - CA ANGL. DEV. = -16.1 DEGREES REMARK 500 HIS A 214 N - CA - C ANGL. DEV. = 16.2 DEGREES REMARK 500 TYR A 249 CB - CG - CD1 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 251 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 253 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 TYR A 267 CB - CG - CD1 ANGL. DEV. = -4.5 DEGREES REMARK 500 PHE A 283 CB - CG - CD2 ANGL. DEV. = -5.1 DEGREES REMARK 500 PHE A 317 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 PHE A 317 CB - CG - CD2 ANGL. DEV. = -9.0 DEGREES REMARK 500 PHE A 317 CB - CG - CD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 LEU A 325 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 TYR A 348 CB - CG - CD1 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 352 CD - NE - CZ ANGL. DEV. = -12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 7 81.35 -151.38 REMARK 500 ALA A 37 125.87 80.50 REMARK 500 PRO A 39 -37.83 -34.08 REMARK 500 ASP A 53 26.85 -151.16 REMARK 500 PRO A 59 -69.24 -28.36 REMARK 500 LYS A 111 66.07 8.82 REMARK 500 ASN A 118 14.90 49.57 REMARK 500 GLN A 175 86.30 160.21 REMARK 500 ASP A 185 58.48 70.13 REMARK 500 GLU A 186 -41.64 -16.89 REMARK 500 ALA A 215 119.36 19.71 REMARK 500 HIS A 238 -75.81 72.91 REMARK 500 HIS A 241 -9.01 -57.47 REMARK 500 GLU A 255 31.76 -91.66 REMARK 500 ALA A 271 -36.25 -39.63 REMARK 500 GLU A 277 107.33 -43.76 REMARK 500 ASP A 295 -69.74 66.52 REMARK 500 ASP A 296 85.19 -151.71 REMARK 500 PHE A 334 32.03 -85.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 110 LYS A 111 -144.09 REMARK 500 GLU A 121 GLY A 122 -110.37 REMARK 500 ASP A 185 GLU A 186 144.10 REMARK 500 PHE A 317 THR A 318 -141.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 30 0.07 SIDE_CHAIN REMARK 500 TYR A 67 0.17 SIDE_CHAIN REMARK 500 ARG A 101 0.16 SIDE_CHAIN REMARK 500 ARG A 149 0.09 SIDE_CHAIN REMARK 500 ARG A 211 0.11 SIDE_CHAIN REMARK 500 TYR A 249 0.13 SIDE_CHAIN REMARK 500 ARG A 251 0.10 SIDE_CHAIN REMARK 500 ARG A 253 0.19 SIDE_CHAIN REMARK 500 TYR A 267 0.15 SIDE_CHAIN REMARK 500 PHE A 322 0.16 SIDE_CHAIN REMARK 500 ARG A 352 0.34 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1047 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A1142 DISTANCE = 5.62 ANGSTROMS REMARK 525 HOH A1161 DISTANCE = 5.60 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 17 NE2 REMARK 620 2 ASP A 295 OD2 81.2 REMARK 620 3 HOH A1039 O 132.8 67.9 REMARK 620 4 HIS A 15 NE2 122.1 78.0 86.2 REMARK 620 5 HIS A 214 NE2 113.8 163.2 95.5 98.8 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 400 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FRC A 1001
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1V78 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH FR233623 REMARK 900 RELATED ID: 1V79 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH FR239087
DBREF 1V7A A 2 357 UNP P56658 ADA_BOVIN 1 356
SEQADV 1V7A ASP A 8 UNP P56658 ASN 7 SEE REMARK 999 SEQADV 1V7A LYS A 32 UNP P56658 ARG 31 SEE REMARK 999 SEQADV 1V7A ARG A 33 UNP P56658 LYS 32 SEE REMARK 999 SEQADV 1V7A THR A 57 UNP P56658 SER 56 SEE REMARK 999 SEQADV 1V7A ASP A 60 UNP P56658 GLU 59 SEE REMARK 999 SEQADV 1V7A ASP A 77 UNP P56658 GLU 76 SEE REMARK 999 SEQADV 1V7A ILE A 79 UNP P56658 VAL 78 SEE REMARK 999 SEQADV 1V7A GLN A 199 UNP P56658 LYS 198 SEE REMARK 999 SEQADV 1V7A THR A 246 UNP P56658 ALA 245 SEE REMARK 999 SEQADV 1V7A ILE A 261 UNP P56658 VAL 260 SEE REMARK 999 SEQADV 1V7A ALA A 279 UNP P56658 PRO 278 SEE REMARK 999 SEQADV 1V7A ILE A 281 UNP P56658 VAL 280 SEE REMARK 999 SEQADV 1V7A LYS A 313 UNP P56658 ASN 312 SEE REMARK 999 SEQADV 1V7A ASP A 314 UNP P56658 GLU 313 SEE REMARK 999 SEQADV 1V7A ARG A 352 UNP P56658 GLY 351 SEE REMARK 999
SEQRES 1 A 356 ALA GLN THR PRO ALA PHE ASP LYS PRO LYS VAL GLU LEU SEQRES 2 A 356 HIS VAL HIS LEU ASP GLY ALA ILE LYS PRO GLU THR ILE SEQRES 3 A 356 LEU TYR TYR GLY LYS ARG ARG GLY ILE ALA LEU PRO ALA SEQRES 4 A 356 ASP THR PRO GLU GLU LEU GLN ASN ILE ILE GLY MET ASP SEQRES 5 A 356 LYS PRO LEU THR LEU PRO ASP PHE LEU ALA LYS PHE ASP SEQRES 6 A 356 TYR TYR MET PRO ALA ILE ALA GLY CYS ARG ASP ALA ILE SEQRES 7 A 356 LYS ARG ILE ALA TYR GLU PHE VAL GLU MET LYS ALA LYS SEQRES 8 A 356 ASP GLY VAL VAL TYR VAL GLU VAL ARG TYR SER PRO HIS SEQRES 9 A 356 LEU LEU ALA ASN SER LYS VAL GLU PRO ILE PRO TRP ASN SEQRES 10 A 356 GLN ALA GLU GLY ASP LEU THR PRO ASP GLU VAL VAL SER SEQRES 11 A 356 LEU VAL ASN GLN GLY LEU GLN GLU GLY GLU ARG ASP PHE SEQRES 12 A 356 GLY VAL LYS VAL ARG SER ILE LEU CYS CYS MET ARG HIS SEQRES 13 A 356 GLN PRO SER TRP SER SER GLU VAL VAL GLU LEU CYS LYS SEQRES 14 A 356 LYS TYR ARG GLU GLN THR VAL VAL ALA ILE ASP LEU ALA SEQRES 15 A 356 GLY ASP GLU THR ILE GLU GLY SER SER LEU PHE PRO GLY SEQRES 16 A 356 HIS VAL GLN ALA TYR ALA GLU ALA VAL LYS SER GLY VAL SEQRES 17 A 356 HIS ARG THR VAL HIS ALA GLY GLU VAL GLY SER ALA ASN SEQRES 18 A 356 VAL VAL LYS GLU ALA VAL ASP THR LEU LYS THR GLU ARG SEQRES 19 A 356 LEU GLY HIS GLY TYR HIS THR LEU GLU ASP THR THR LEU SEQRES 20 A 356 TYR ASN ARG LEU ARG GLN GLU ASN MET HIS PHE GLU ILE SEQRES 21 A 356 CYS PRO TRP SER SER TYR LEU THR GLY ALA TRP LYS PRO SEQRES 22 A 356 ASP THR GLU HIS ALA VAL ILE ARG PHE LYS ASN ASP GLN SEQRES 23 A 356 VAL ASN TYR SER LEU ASN THR ASP ASP PRO LEU ILE PHE SEQRES 24 A 356 LYS SER THR LEU ASP THR ASP TYR GLN MET THR LYS LYS SEQRES 25 A 356 ASP MET GLY PHE THR GLU GLU GLU PHE LYS ARG LEU ASN SEQRES 26 A 356 ILE ASN ALA ALA LYS SER SER PHE LEU PRO GLU ASP GLU SEQRES 27 A 356 LYS LYS GLU LEU LEU ASP LEU LEU TYR LYS ALA TYR ARG SEQRES 28 A 356 MET PRO SER PRO ALA
HET ZN A 400 1 HET FRC A1001 25
HETNAM ZN ZINC ION HETNAM FRC 1-{(1R,2S)-2-HYDROXY-1-[2-(2-NAPHTHYLOXY) HETNAM 2 FRC ETHYL]PROPYL}-1H-IMIDAZONE-4-CARBOXAMIDE
HETSYN FRC FR247581
FORMUL 2 ZN ZN 2+ FORMUL 3 FRC C19 H21 N3 O3 FORMUL 4 HOH *186(H2 O)
HELIX 1 1 HIS A 17 ALA A 21 5 5 HELIX 2 2 LYS A 23 GLY A 35 1 13 HELIX 3 3 THR A 42 GLY A 51 1 10 HELIX 4 4 THR A 57 ALA A 73 1 17 HELIX 5 5 CYS A 75 ASP A 93 1 19 HELIX 6 6 THR A 125 GLY A 145 1 21 HELIX 7 7 GLN A 158 SER A 160 5 3 HELIX 8 8 TRP A 161 TYR A 172 1 12 HELIX 9 9 GLY A 190 LEU A 193 5 4 HELIX 10 10 PHE A 194 SER A 207 1 14 HELIX 11 11 SER A 220 THR A 230 1 11 HELIX 12 12 GLY A 239 GLU A 244 5 6 HELIX 13 13 ASP A 245 GLU A 255 1 11 HELIX 14 14 CYS A 262 GLY A 270 1 9 HELIX 15 15 HIS A 278 ASP A 286 1 9 HELIX 16 16 ASP A 296 LYS A 301 1 6 HELIX 17 17 THR A 303 ASP A 314 1 12 HELIX 18 18 THR A 318 SER A 332 1 15 HELIX 19 19 PRO A 336 TYR A 351 1 16
SHEET 1 A 8 LYS A 11 GLU A 13 0 SHEET 2 A 8 VAL A 95 TYR A 102 1 O VAL A 96 N LYS A 11 SHEET 3 A 8 LYS A 147 MET A 155 1 O ILE A 151 N VAL A 100 SHEET 4 A 8 VAL A 177 ALA A 183 1 O ALA A 183 N CYS A 154 SHEET 5 A 8 HIS A 210 VAL A 213 1 O THR A 212 N ILE A 180 SHEET 6 A 8 ARG A 235 GLY A 237 1 O GLY A 237 N VAL A 213 SHEET 7 A 8 HIS A 258 ILE A 261 1 O GLU A 260 N LEU A 236 SHEET 8 A 8 TYR A 290 LEU A 292 1 O SER A 291 N PHE A 259
LINK ZN ZN A 400 NE2 HIS A 17 1555 1555 1.97 LINK ZN ZN A 400 OD2 ASP A 295 1555 1555 2.72 LINK ZN ZN A 400 O HOH A1039 1555 1555 1.95 LINK ZN ZN A 400 NE2 HIS A 15 1555 1555 2.05 LINK ZN ZN A 400 NE2 HIS A 214 1555 1555 2.06
CISPEP 1 GLU A 113 PRO A 114 0 1.21 CISPEP 2 GLN A 175 THR A 176 0 -6.43
SITE 1 AC1 5 HIS A 15 HIS A 17 HIS A 214 ASP A 295 SITE 2 AC1 5 HOH A1039 SITE 1 AC2 16 HIS A 17 ASP A 19 PHE A 61 LEU A 62 SITE 2 AC2 16 PHE A 65 TYR A 102 SER A 103 LEU A 106 SITE 3 AC2 16 TRP A 117 MET A 155 ALA A 183 GLY A 184 SITE 4 AC2 16 ASP A 185 ASP A 296 HOH A1023 HOH A1171
CRYST1 77.520 77.520 136.200 90.00 90.00 90.00 P 43 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012900 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012900 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007342 0.00000