10 20 30 40 50 60 70 80 1V6E - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL PROTEIN 29-NOV-03 1V6E
TITLE SOLUTION STRUCTURE OF A N-TERMINAL UBIQUITIN-LIKE DOMAIN IN TITLE 2 MOUSE TUBULIN-SPECIFIC CHAPERONE B
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOSKELETON-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN-LIKE DOMAIN; COMPND 5 SYNONYM: TUBULIN-SPECIFIC CHAPERONE B, TBCB; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RIKEN CDNA 2410007D12; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030414-64; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS TUBULIN-SPECIFIC CHAPERONE B, TUBULIN FOLDING COFACTOR B, KEYWDS 2 CYTOSKELETON-ASSOCIATED PROTEIN CKAP1, CYTOSKELETON, KEYWDS 3 MICROTUBULE, UBIQUITIN-LIKE FOLD, STRUCTURAL GENOMICS, KEYWDS 4 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 5 STRUCTURAL PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.ZHAO,T.KIGAWA,K.SAITO,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1V6E 1 VERSN REVDAT 1 14-DEC-04 1V6E 0
JRNL AUTH C.ZHAO,T.KIGAWA,K.SAITO,S.KOSHIBA,M.INOUE, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF A N-TERMINAL UBIQUITIN-LIKE JRNL TITL 2 DOMAIN IN MOUSE TUBULIN-SPECIFIC CHAPERONE B JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1V6E COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-DEC-03. REMARK 100 THE RCSB ID CODE IS RCSB006263.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.15MM PROTEIN U-15N, 13C; REMARK 210 20MM PHOSPHATE NA (PH6.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.860, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 86.33 -165.11 REMARK 500 1 SER A 14 134.08 -173.51 REMARK 500 1 CYS A 48 -59.63 -127.51 REMARK 500 1 ALA A 56 -73.69 -80.24 REMARK 500 1 ASP A 58 75.99 39.62 REMARK 500 1 TYR A 61 -74.28 -114.58 REMARK 500 1 LEU A 71 101.14 -56.05 REMARK 500 1 ASP A 78 96.36 -58.59 REMARK 500 1 CYS A 80 -172.92 -64.32 REMARK 500 1 SER A 90 158.20 60.75 REMARK 500 1 SER A 94 -60.04 73.65 REMARK 500 2 SER A 5 -45.42 -167.46 REMARK 500 2 GLU A 39 -35.85 -39.43 REMARK 500 2 MET A 49 154.31 -44.35 REMARK 500 2 ASP A 58 78.57 37.96 REMARK 500 2 TYR A 61 -80.19 -112.32 REMARK 500 2 GLN A 66 107.58 -40.69 REMARK 500 2 LEU A 71 101.39 -54.09 REMARK 500 2 ASP A 78 103.48 -57.43 REMARK 500 2 CYS A 80 -173.36 -68.43 REMARK 500 2 ASP A 86 105.43 -59.43 REMARK 500 3 SER A 2 99.85 63.93 REMARK 500 3 SER A 5 150.36 -41.52 REMARK 500 3 CYS A 48 -65.30 -120.72 REMARK 500 3 MET A 49 150.45 -46.53 REMARK 500 3 ALA A 56 -72.37 -92.18 REMARK 500 3 ASP A 58 60.01 154.05 REMARK 500 3 TYR A 61 -76.06 -114.75 REMARK 500 3 GLN A 66 103.62 -41.42 REMARK 500 3 ASP A 78 100.80 -58.25 REMARK 500 3 CYS A 80 -173.49 -68.67 REMARK 500 3 SER A 93 80.06 65.03 REMARK 500 4 SER A 2 116.62 -170.09 REMARK 500 4 SER A 5 132.59 -170.39 REMARK 500 4 CYS A 48 -65.36 -122.21 REMARK 500 4 MET A 49 159.83 -44.89 REMARK 500 4 ALA A 56 -73.56 -81.04 REMARK 500 4 ASP A 58 74.84 39.49 REMARK 500 4 TYR A 61 -80.89 -115.73 REMARK 500 4 LEU A 71 102.36 -57.20 REMARK 500 4 ASP A 78 92.53 -60.99 REMARK 500 4 CYS A 80 -170.90 -58.74 REMARK 500 4 ASP A 86 98.88 -55.85 REMARK 500 4 SER A 90 -55.55 -168.88 REMARK 500 5 SER A 5 -60.03 -150.04 REMARK 500 5 PHE A 19 -177.25 178.99 REMARK 500 5 CYS A 48 -63.95 -126.23 REMARK 500 5 ALA A 56 -69.91 -107.50 REMARK 500 5 ASP A 58 46.05 159.32 REMARK 500 5 TYR A 61 -79.02 -106.35 REMARK 500 5 LEU A 71 101.30 -52.71 REMARK 500 5 ASP A 78 98.84 -58.02 REMARK 500 5 CYS A 80 -163.91 -57.50 REMARK 500 5 ASP A 86 98.90 -54.21 REMARK 500 6 SER A 18 32.70 71.97 REMARK 500 6 CYS A 48 -64.98 -123.61 REMARK 500 6 MET A 49 160.37 -45.17 REMARK 500 6 ALA A 56 -71.63 -90.27 REMARK 500 6 ASP A 58 58.54 38.41 REMARK 500 6 GLN A 66 109.27 -47.14 REMARK 500 6 ASP A 77 141.65 -175.49 REMARK 500 6 ASP A 78 96.96 -49.96 REMARK 500 6 CYS A 80 -169.61 -58.19 REMARK 500 6 ASP A 86 103.71 -57.64 REMARK 500 7 SER A 2 -57.26 -154.24 REMARK 500 7 SER A 3 84.95 55.86 REMARK 500 7 CYS A 48 -57.88 -121.63 REMARK 500 7 ALA A 56 -70.41 -100.50 REMARK 500 7 ASP A 58 68.87 39.40 REMARK 500 7 TYR A 61 -74.77 -115.28 REMARK 500 7 ASP A 78 90.19 -68.95 REMARK 500 7 CYS A 80 -170.87 -57.19 REMARK 500 7 ASP A 86 104.52 -54.44 REMARK 500 7 SER A 94 -176.52 51.15 REMARK 500 8 SER A 6 -66.69 -138.83 REMARK 500 8 GLU A 39 -39.14 -39.38 REMARK 500 8 CYS A 48 -62.22 -124.48 REMARK 500 8 MET A 49 152.34 -49.99 REMARK 500 8 ALA A 56 -73.48 -79.52 REMARK 500 8 ASP A 58 72.21 37.67 REMARK 500 8 TYR A 61 -79.94 -109.27 REMARK 500 8 GLN A 66 103.92 -40.25 REMARK 500 8 CYS A 80 -172.83 -67.92 REMARK 500 8 SER A 94 112.94 -175.19 REMARK 500 9 SER A 2 91.22 -166.23 REMARK 500 9 SER A 6 168.83 55.92 REMARK 500 9 ILE A 31 -39.26 -36.46 REMARK 500 9 CYS A 48 -62.35 -125.84 REMARK 500 9 ALA A 56 -69.55 -106.11 REMARK 500 9 ASP A 58 70.18 156.66 REMARK 500 9 TYR A 61 -82.58 -115.50 REMARK 500 9 ASP A 77 167.74 178.95 REMARK 500 9 ASP A 78 100.57 -59.83 REMARK 500 9 CYS A 80 -173.53 -65.81 REMARK 500 9 ASP A 86 100.94 -56.38 REMARK 500 9 SER A 88 -62.35 -96.87 REMARK 500 9 SER A 94 -64.92 72.95 REMARK 500 10 SER A 6 99.92 -178.83 REMARK 500 10 SER A 18 -60.84 76.10 REMARK 500 10 ALA A 56 -73.63 -79.80 REMARK 500 10 ASP A 58 76.36 39.41 REMARK 500 10 TYR A 61 -72.05 -116.30 REMARK 500 10 GLN A 66 108.97 -43.81 REMARK 500 10 LEU A 71 101.15 -53.22 REMARK 500 10 ASP A 78 104.99 -56.59 REMARK 500 10 CYS A 80 -171.46 -64.74 REMARK 500 10 ASP A 86 104.27 -54.58 REMARK 500 10 SER A 88 71.78 -117.67 REMARK 500 10 SER A 93 -58.16 -132.03 REMARK 500 10 SER A 94 154.00 63.55 REMARK 500 11 SER A 3 -61.09 -91.64 REMARK 500 11 CYS A 48 -63.11 -124.31 REMARK 500 11 ALA A 56 -71.93 -91.76 REMARK 500 11 ASP A 58 61.09 38.06 REMARK 500 11 TYR A 61 -72.13 -112.26 REMARK 500 11 ASP A 77 144.48 -178.57 REMARK 500 11 ASP A 78 97.20 -51.05 REMARK 500 11 CYS A 80 -169.11 -60.90 REMARK 500 11 ASP A 86 106.63 -58.98 REMARK 500 11 SER A 88 76.74 -112.94 REMARK 500 11 SER A 90 146.86 -179.74 REMARK 500 11 SER A 94 -85.35 -143.12 REMARK 500 12 SER A 18 -60.39 78.58 REMARK 500 12 CYS A 48 37.62 -145.24 REMARK 500 12 ALA A 56 -69.49 -103.31 REMARK 500 12 ASP A 58 67.18 38.20 REMARK 500 12 LEU A 64 49.29 -85.07 REMARK 500 12 ASP A 78 96.20 -57.43 REMARK 500 12 CYS A 80 -170.82 -68.55 REMARK 500 12 SER A 88 63.94 -111.75 REMARK 500 13 SER A 2 98.34 -172.92 REMARK 500 13 SER A 5 73.06 45.65 REMARK 500 13 SER A 14 132.55 -173.84 REMARK 500 13 PHE A 19 160.07 179.53 REMARK 500 13 ILE A 31 -38.33 -38.07 REMARK 500 13 GLU A 39 -30.47 -38.37 REMARK 500 13 ALA A 56 -71.82 -91.84 REMARK 500 13 ASP A 58 61.38 38.81 REMARK 500 13 ALA A 69 171.40 -53.24 REMARK 500 13 ASP A 78 97.78 -59.68 REMARK 500 13 CYS A 80 -172.41 -61.83 REMARK 500 13 ASP A 86 101.02 -55.26 REMARK 500 13 SER A 93 93.08 178.52 REMARK 500 13 SER A 94 -59.50 -167.14 REMARK 500 14 SER A 2 -59.19 73.19 REMARK 500 14 SER A 6 -54.86 -120.54 REMARK 500 14 ILE A 31 -38.47 -37.87 REMARK 500 14 ALA A 56 -72.47 -86.36 REMARK 500 14 ASP A 58 65.89 39.67 REMARK 500 14 CYS A 80 -172.23 -66.14 REMARK 500 14 SER A 90 -92.13 54.55 REMARK 500 14 SER A 94 122.75 -173.36 REMARK 500 15 SER A 5 111.84 -178.48 REMARK 500 15 SER A 6 102.09 54.37 REMARK 500 15 PHE A 19 -178.59 -177.18 REMARK 500 15 CYS A 48 26.43 -141.48 REMARK 500 15 ALA A 56 -71.76 -98.70 REMARK 500 15 ASP A 58 45.96 154.82 REMARK 500 15 TYR A 61 -72.49 -114.16 REMARK 500 15 ASP A 77 147.00 -177.86 REMARK 500 15 ASP A 78 101.17 -49.42 REMARK 500 15 CYS A 80 -162.47 -58.22 REMARK 500 15 SER A 88 -59.85 -121.13 REMARK 500 16 SER A 3 89.72 -150.05 REMARK 500 16 PHE A 19 160.34 178.85 REMARK 500 16 CYS A 48 29.49 -140.11 REMARK 500 16 ALA A 56 -71.83 -92.66 REMARK 500 16 ASP A 58 47.03 155.02 REMARK 500 16 TYR A 61 -61.93 -106.72 REMARK 500 16 LEU A 64 65.56 -69.20 REMARK 500 16 ASP A 78 98.28 -67.78 REMARK 500 16 CYS A 80 -165.26 -57.34 REMARK 500 16 ASP A 86 100.45 -58.80 REMARK 500 16 SER A 90 116.13 62.52 REMARK 500 16 SER A 94 122.63 60.95 REMARK 500 17 SER A 2 -57.49 -149.50 REMARK 500 17 SER A 6 89.95 60.01 REMARK 500 17 LEU A 16 -65.94 -93.01 REMARK 500 17 GLU A 39 -34.82 -39.19 REMARK 500 17 CYS A 48 -58.39 -123.66 REMARK 500 17 ALA A 56 -70.26 -99.65 REMARK 500 17 ASP A 58 55.45 38.34 REMARK 500 17 TYR A 61 -70.99 -111.11 REMARK 500 17 GLN A 66 107.72 -41.33 REMARK 500 17 ASP A 77 144.55 -174.98 REMARK 500 17 CYS A 80 -168.16 -55.81 REMARK 500 17 ASP A 86 90.00 -54.38 REMARK 500 17 SER A 90 117.90 62.99 REMARK 500 18 SER A 2 -57.86 -167.23 REMARK 500 18 SER A 3 -60.51 -103.09 REMARK 500 18 SER A 5 -67.96 -165.03 REMARK 500 18 SER A 14 148.20 -170.15 REMARK 500 18 PHE A 19 -166.40 -112.60 REMARK 500 18 ALA A 56 -70.40 -102.69 REMARK 500 18 ASP A 58 46.15 155.46 REMARK 500 18 TYR A 61 -70.43 -109.47 REMARK 500 18 LEU A 64 59.71 -91.11 REMARK 500 18 CYS A 80 -170.48 -57.60 REMARK 500 18 ASP A 86 97.20 -54.03 REMARK 500 18 SER A 90 93.79 -169.54 REMARK 500 18 SER A 93 156.92 65.51 REMARK 500 18 SER A 94 -58.90 -149.50 REMARK 500 19 SER A 18 -66.62 70.75 REMARK 500 19 PHE A 19 174.48 -58.81 REMARK 500 19 CYS A 48 33.33 -144.11 REMARK 500 19 ALA A 56 -69.59 -106.74 REMARK 500 19 ASP A 58 72.72 159.11 REMARK 500 19 TYR A 61 -78.19 -114.65 REMARK 500 19 CYS A 80 -172.45 -55.62 REMARK 500 19 ASP A 86 106.38 -57.24 REMARK 500 19 SER A 90 100.38 81.91 REMARK 500 19 SER A 93 138.21 -174.06 REMARK 500 19 SER A 94 -57.96 -125.42 REMARK 500 20 SER A 3 78.95 45.76 REMARK 500 20 SER A 6 -82.73 61.44 REMARK 500 20 PHE A 19 161.20 179.54 REMARK 500 20 ALA A 56 -70.69 -100.36 REMARK 500 20 ASP A 58 65.14 39.98 REMARK 500 20 GLN A 66 104.96 -41.32 REMARK 500 20 ASP A 78 102.33 -56.72 REMARK 500 20 CYS A 80 -164.88 -58.78 REMARK 500 20 ASP A 86 102.29 -55.59 REMARK 500 20 SER A 88 62.87 -112.41 REMARK 500 20 SER A 93 96.18 48.83 REMARK 500 20 SER A 94 -59.59 -176.30 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007003018.1 RELATED DB: TARGETDB
DBREF 1V6E A 8 89 UNP Q9D1E6 TBCB_MOUSE 11 92
SEQADV 1V6E GLY A 1 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E SER A 2 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E SER A 3 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E GLY A 4 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E SER A 5 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E SER A 6 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E GLY A 7 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E ARG A 81 UNP Q9D1E6 SER 84 ENGINEERED SEQADV 1V6E SER A 90 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E GLY A 91 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E PRO A 92 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E SER A 93 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E SER A 94 UNP Q9D1E6 CLONING ARTIFACT SEQADV 1V6E GLY A 95 UNP Q9D1E6 CLONING ARTIFACT
SEQRES 1 A 95 GLY SER SER GLY SER SER GLY VAL MET VAL PHE ILE SER SEQRES 2 A 95 SER SER LEU ASN SER PHE ARG SER GLU LYS ARG TYR SER SEQRES 3 A 95 ARG SER LEU THR ILE ALA GLU PHE LYS CYS LYS LEU GLU SEQRES 4 A 95 LEU VAL VAL GLY SER PRO ALA SER CYS MET GLU LEU GLU SEQRES 5 A 95 LEU TYR GLY ALA ASP ASP LYS PHE TYR SER LYS LEU ASP SEQRES 6 A 95 GLN GLU ASP ALA LEU LEU GLY SER TYR PRO VAL ASP ASP SEQRES 7 A 95 GLY CYS ARG ILE HIS VAL ILE ASP HIS SER GLY SER GLY SEQRES 8 A 95 PRO SER SER GLY
HELIX 1 1 THR A 30 VAL A 42 1 13
SHEET 1 A 5 SER A 21 TYR A 25 0 SHEET 2 A 5 VAL A 8 SER A 14 -1 N ILE A 12 O SER A 21 SHEET 3 A 5 ARG A 81 VAL A 84 1 O ILE A 82 N PHE A 11 SHEET 4 A 5 GLU A 52 TYR A 54 -1 N TYR A 54 O ARG A 81 SHEET 5 A 5 PHE A 60 SER A 62 -1 O TYR A 61 N LEU A 53
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000