10 20 30 40 50 60 70 80 1V5J - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CELL ADHESION 25-NOV-03 1V5J
TITLE SOLUTION STRUCTURE OF RSGI RUH-008, FN3 DOMAIN IN HUMAN CDNA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA1355 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FN3 DOMAIN; COMPND 5 SYNONYM: RSGI RUH-008; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAZUSA CDNA KIAA1355; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P021007-47; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS FN3 DOMAIN, HUMAN CDNA, STRUCTURAL GENOMICS, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, CELL KEYWDS 3 ADHESION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR Y.DOI-KATAYAMA,F.HAYASHI,H.HIROTA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1V5J 1 VERSN REVDAT 1 25-MAY-04 1V5J 0
JRNL AUTH Y.DOI-KATAYAMA,F.HAYASHI,H.HIROTA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-008, A FN3 DOMAIN JRNL TITL 2 IN HUMAN CDNA JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1V5J COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-DEC-03. REMARK 100 THE RCSB ID CODE IS RCSB006232.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 120MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.3MM FN3 DOMAIN U-15, 13C; REMARK 210 20MM SODIUM PHOSPHATE; 100MM REMARK 210 NACL; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20020425, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.822, REMARK 210 CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 87.20 43.83 REMARK 500 1 SER A 5 103.87 -160.86 REMARK 500 1 LYS A 35 -89.31 177.94 REMARK 500 1 ARG A 45 154.50 177.44 REMARK 500 1 TRP A 51 105.06 -57.99 REMARK 500 1 ASP A 55 103.33 -165.75 REMARK 500 1 ALA A 59 131.22 -37.22 REMARK 500 1 SER A 92 165.52 -41.22 REMARK 500 1 ASN A 93 154.61 -37.08 REMARK 500 1 THR A 99 63.90 -157.65 REMARK 500 1 SER A 103 72.12 44.67 REMARK 500 1 SER A 106 137.99 -175.34 REMARK 500 2 SER A 3 33.76 -92.88 REMARK 500 2 LYS A 35 -88.17 174.20 REMARK 500 2 ARG A 45 153.81 176.16 REMARK 500 2 VAL A 53 104.19 -46.01 REMARK 500 2 ALA A 59 131.32 -36.63 REMARK 500 2 LEU A 70 174.48 -47.95 REMARK 500 2 ASP A 73 19.58 54.74 REMARK 500 2 SER A 86 -58.47 90.94 REMARK 500 2 SER A 92 169.69 -43.28 REMARK 500 2 ASN A 93 160.17 -39.16 REMARK 500 2 THR A 99 73.83 -160.24 REMARK 500 2 SER A 107 126.48 -176.92 REMARK 500 3 SER A 2 -57.16 -138.19 REMARK 500 3 SER A 5 135.73 68.96 REMARK 500 3 SER A 6 -81.88 177.14 REMARK 500 3 LYS A 35 -106.09 -148.54 REMARK 500 3 ARG A 45 150.18 177.48 REMARK 500 3 SER A 48 -56.63 78.98 REMARK 500 3 GLN A 49 -144.69 25.36 REMARK 500 3 TRP A 51 105.16 -41.13 REMARK 500 3 ALA A 59 125.31 -37.96 REMARK 500 3 SER A 86 -60.36 87.76 REMARK 500 3 SER A 92 173.30 -45.51 REMARK 500 3 ASN A 93 168.14 -43.50 REMARK 500 3 SER A 103 -67.95 67.86 REMARK 500 4 SER A 5 74.60 -104.15 REMARK 500 4 LYS A 35 -90.25 172.30 REMARK 500 4 ARG A 45 153.20 176.49 REMARK 500 4 SER A 48 50.91 -118.66 REMARK 500 4 ALA A 59 128.35 -36.56 REMARK 500 4 SER A 92 172.57 -45.54 REMARK 500 4 ASN A 93 158.80 -39.68 REMARK 500 4 THR A 99 31.37 -157.74 REMARK 500 4 SER A 103 -63.32 80.40 REMARK 500 5 SER A 3 34.95 -91.27 REMARK 500 5 LEU A 14 98.30 -56.99 REMARK 500 5 LYS A 35 -86.36 177.22 REMARK 500 5 ARG A 45 147.38 178.15 REMARK 500 5 ALA A 59 128.28 -37.31 REMARK 500 5 SER A 86 -59.74 91.04 REMARK 500 5 SER A 92 162.75 -40.52 REMARK 500 5 ASN A 93 151.72 -36.03 REMARK 500 5 THR A 99 21.56 -150.12 REMARK 500 5 SER A 103 36.48 73.26 REMARK 500 5 SER A 106 -51.24 176.79 REMARK 500 5 SER A 107 150.18 -42.83 REMARK 500 6 SER A 2 146.12 -178.36 REMARK 500 6 VAL A 17 108.00 -162.39 REMARK 500 6 LYS A 35 -85.90 168.38 REMARK 500 6 ARG A 45 148.56 -178.61 REMARK 500 6 VAL A 53 105.49 -59.36 REMARK 500 6 ALA A 59 122.04 -34.34 REMARK 500 6 LYS A 72 -126.98 -61.79 REMARK 500 6 ASP A 73 85.54 -56.22 REMARK 500 6 SER A 92 162.17 -39.39 REMARK 500 6 ASN A 93 151.58 -35.35 REMARK 500 6 SER A 103 64.72 60.67 REMARK 500 6 SER A 106 85.55 46.46 REMARK 500 7 LYS A 35 -88.94 -175.85 REMARK 500 7 ARG A 45 147.14 178.57 REMARK 500 7 VAL A 53 100.33 -50.34 REMARK 500 7 ALA A 59 127.75 -39.17 REMARK 500 7 SER A 92 162.39 -40.25 REMARK 500 7 ASN A 93 152.55 -35.94 REMARK 500 7 THR A 99 55.52 -157.09 REMARK 500 7 SER A 103 -73.47 67.26 REMARK 500 7 SER A 107 113.39 58.70 REMARK 500 8 SER A 2 -42.76 -179.34 REMARK 500 8 SER A 3 32.15 -98.67 REMARK 500 8 SER A 6 147.15 -177.78 REMARK 500 8 LEU A 14 97.39 -54.16 REMARK 500 8 LYS A 35 -104.28 -161.02 REMARK 500 8 VAL A 53 107.70 -57.40 REMARK 500 8 ALA A 59 128.11 -32.56 REMARK 500 8 SER A 92 167.89 -44.05 REMARK 500 8 ASN A 93 147.79 -39.55 REMARK 500 8 THR A 99 44.59 -103.22 REMARK 500 8 SER A 103 -70.27 72.68 REMARK 500 9 SER A 6 -56.11 -134.49 REMARK 500 9 LYS A 35 -111.09 -150.07 REMARK 500 9 ARG A 45 146.24 179.38 REMARK 500 9 VAL A 53 104.86 -49.80 REMARK 500 9 ALA A 59 124.29 -38.13 REMARK 500 9 ILE A 71 -155.10 -127.46 REMARK 500 9 SER A 92 176.58 -45.98 REMARK 500 9 ASN A 93 170.83 -43.89 REMARK 500 9 THR A 99 30.70 -149.26 REMARK 500 10 SER A 2 -60.40 -143.19 REMARK 500 10 SER A 5 94.09 64.44 REMARK 500 10 SER A 6 103.74 -161.84 REMARK 500 10 LYS A 35 -104.62 -158.29 REMARK 500 10 ARG A 45 148.66 179.87 REMARK 500 10 ASP A 55 105.87 -166.15 REMARK 500 10 ALA A 59 123.02 -38.29 REMARK 500 10 SER A 86 -59.46 89.21 REMARK 500 10 SER A 92 156.10 -36.76 REMARK 500 10 ASN A 93 151.04 -35.67 REMARK 500 10 SER A 103 -71.82 68.62 REMARK 500 10 SER A 106 138.15 -171.87 REMARK 500 10 SER A 107 103.88 57.75 REMARK 500 11 LYS A 35 -108.73 -150.90 REMARK 500 11 ARG A 45 149.20 177.09 REMARK 500 11 ASP A 55 104.69 -165.42 REMARK 500 11 ALA A 59 128.16 -39.90 REMARK 500 11 LEU A 70 -176.02 46.56 REMARK 500 11 ILE A 71 -150.40 -149.35 REMARK 500 11 SER A 92 170.35 -44.33 REMARK 500 11 ASN A 93 157.52 -39.03 REMARK 500 11 THR A 99 54.41 -149.41 REMARK 500 11 SER A 103 85.54 54.84 REMARK 500 11 SER A 106 136.00 -173.87 REMARK 500 12 SER A 5 74.43 64.85 REMARK 500 12 LYS A 35 -101.82 -162.58 REMARK 500 12 ARG A 45 152.87 174.47 REMARK 500 12 ALA A 59 137.32 -27.21 REMARK 500 12 LEU A 70 159.48 -39.71 REMARK 500 12 ILE A 71 -153.13 -115.13 REMARK 500 12 ASP A 73 19.91 83.28 REMARK 500 12 SER A 86 -61.79 86.96 REMARK 500 12 SER A 92 164.31 -39.56 REMARK 500 12 ASN A 93 155.96 -37.10 REMARK 500 12 THR A 99 69.57 -167.22 REMARK 500 12 SER A 103 -69.47 78.87 REMARK 500 12 SER A 107 126.19 -173.49 REMARK 500 13 SER A 2 117.99 64.99 REMARK 500 13 LYS A 35 -88.90 -172.80 REMARK 500 13 ARG A 45 147.50 178.23 REMARK 500 13 ALA A 59 139.02 -33.34 REMARK 500 13 SER A 92 172.15 -43.48 REMARK 500 13 ASN A 93 171.40 -43.12 REMARK 500 13 THR A 99 22.18 -148.29 REMARK 500 13 SER A 103 79.21 44.34 REMARK 500 13 SER A 106 89.49 43.92 REMARK 500 13 SER A 107 170.17 63.11 REMARK 500 14 LEU A 14 101.53 -58.49 REMARK 500 14 LYS A 35 -90.76 -171.56 REMARK 500 14 ARG A 45 146.25 -179.23 REMARK 500 14 SER A 48 18.33 59.86 REMARK 500 14 GLN A 49 -172.58 -60.71 REMARK 500 14 TRP A 51 105.74 -57.06 REMARK 500 14 VAL A 53 102.17 -41.31 REMARK 500 14 ALA A 59 128.75 -39.05 REMARK 500 14 LEU A 70 158.55 -39.11 REMARK 500 14 SER A 86 -58.84 90.07 REMARK 500 14 SER A 92 163.06 -39.05 REMARK 500 14 ASN A 93 145.85 -33.84 REMARK 500 14 THR A 99 44.54 -158.88 REMARK 500 14 SER A 106 103.40 -168.26 REMARK 500 15 SER A 2 -60.46 -176.93 REMARK 500 15 SER A 3 34.36 -97.49 REMARK 500 15 SER A 6 121.61 60.29 REMARK 500 15 LYS A 35 -111.37 -142.19 REMARK 500 15 ARG A 45 146.42 178.78 REMARK 500 15 VAL A 53 92.54 -63.59 REMARK 500 15 ALA A 59 150.13 -34.26 REMARK 500 15 THR A 63 10.71 -140.04 REMARK 500 15 LEU A 70 169.43 -44.98 REMARK 500 15 SER A 86 30.76 -92.59 REMARK 500 15 SER A 92 167.77 -42.95 REMARK 500 15 ASN A 93 155.97 -37.36 REMARK 500 15 THR A 99 37.04 -141.07 REMARK 500 15 SER A 107 -57.45 -145.63 REMARK 500 16 SER A 2 -64.01 -138.23 REMARK 500 16 SER A 6 158.65 57.92 REMARK 500 16 LYS A 35 -107.71 -151.17 REMARK 500 16 ASP A 55 103.47 -161.16 REMARK 500 16 ALA A 59 138.33 -36.86 REMARK 500 16 LEU A 70 161.24 -41.24 REMARK 500 16 ASP A 73 23.11 82.18 REMARK 500 16 SER A 86 -58.77 90.41 REMARK 500 16 SER A 92 163.88 -40.08 REMARK 500 16 ASN A 93 155.83 -37.36 REMARK 500 16 SER A 103 76.00 44.14 REMARK 500 16 SER A 107 164.96 58.39 REMARK 500 17 ARG A 18 97.61 -66.52 REMARK 500 17 LYS A 35 -86.97 -177.17 REMARK 500 17 ARG A 45 146.58 178.89 REMARK 500 17 VAL A 53 105.99 -47.52 REMARK 500 17 ALA A 59 132.20 -38.81 REMARK 500 17 ILE A 71 -169.42 -118.69 REMARK 500 17 ASP A 73 -4.63 82.03 REMARK 500 17 SER A 92 161.50 -39.51 REMARK 500 17 ASN A 93 149.62 -35.67 REMARK 500 17 SER A 103 56.97 38.75 REMARK 500 18 LYS A 35 -90.16 175.91 REMARK 500 18 ARG A 45 153.80 179.20 REMARK 500 18 GLN A 49 -172.14 -69.33 REMARK 500 18 ALA A 59 131.63 -38.27 REMARK 500 18 LEU A 70 -176.56 45.62 REMARK 500 18 ILE A 71 -149.95 -146.51 REMARK 500 18 ASP A 73 36.19 75.85 REMARK 500 18 SER A 86 -59.94 86.16 REMARK 500 18 SER A 92 167.81 -45.02 REMARK 500 18 ASN A 93 153.19 -38.44 REMARK 500 18 SER A 106 117.89 -171.55 REMARK 500 19 SER A 6 147.86 60.83 REMARK 500 19 LYS A 35 -106.41 -149.23 REMARK 500 19 ARG A 45 146.82 177.72 REMARK 500 19 ASP A 55 105.30 -165.63 REMARK 500 19 ALA A 59 124.58 -38.27 REMARK 500 19 LEU A 70 159.08 -39.00 REMARK 500 19 ILE A 71 -124.94 -103.67 REMARK 500 19 LYS A 72 -91.51 -135.99 REMARK 500 19 ASP A 73 64.69 -66.20 REMARK 500 19 SER A 92 163.51 -40.62 REMARK 500 19 ASN A 93 151.18 -36.52 REMARK 500 20 SER A 3 37.07 -92.37 REMARK 500 20 SER A 5 51.50 -104.02 REMARK 500 20 LYS A 35 -88.44 175.48 REMARK 500 20 SER A 48 53.16 37.64 REMARK 500 20 ASP A 55 105.35 -163.89 REMARK 500 20 ALA A 59 124.51 -37.33 REMARK 500 20 ASP A 73 18.77 82.68 REMARK 500 20 SER A 92 173.05 -43.65 REMARK 500 20 ASN A 93 173.46 -44.46 REMARK 500 20 SER A 103 81.19 38.80 REMARK 500 REMARK 500 REMARK: NULL
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001328.1 RELATED DB: TARGETDB
DBREF 1V5J A 8 102 GB 7243091 BAA92593 634 728
SEQADV 1V5J GLY A 1 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 2 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 3 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 4 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 5 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 6 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 7 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 103 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 104 GB 7243091 CLONING ARTIFACT SEQADV 1V5J PRO A 105 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 106 GB 7243091 CLONING ARTIFACT SEQADV 1V5J SER A 107 GB 7243091 CLONING ARTIFACT SEQADV 1V5J GLY A 108 GB 7243091 CLONING ARTIFACT
SEQRES 1 A 108 GLY SER SER GLY SER SER GLY LEU SER PRO PRO ARG GLY SEQRES 2 A 108 LEU VAL ALA VAL ARG THR PRO ARG GLY VAL LEU LEU HIS SEQRES 3 A 108 TRP ASP PRO PRO GLU LEU VAL PRO LYS ARG LEU ASP GLY SEQRES 4 A 108 TYR VAL LEU GLU GLY ARG GLN GLY SER GLN GLY TRP GLU SEQRES 5 A 108 VAL LEU ASP PRO ALA VAL ALA GLY THR GLU THR GLU LEU SEQRES 6 A 108 LEU VAL PRO GLY LEU ILE LYS ASP VAL LEU TYR GLU PHE SEQRES 7 A 108 ARG LEU VAL ALA PHE ALA GLY SER PHE VAL SER ASP PRO SEQRES 8 A 108 SER ASN THR ALA ASN VAL SER THR SER GLY LEU SER GLY SEQRES 9 A 108 PRO SER SER GLY
SHEET 1 A 6 ARG A 12 THR A 19 0 SHEET 2 A 6 GLY A 22 ASP A 28 -1 SHEET 3 A 6 TYR A 40 GLN A 46 -1 SHEET 4 A 6 GLU A 52 VAL A 58 -1 SHEET 5 A 6 GLU A 64 VAL A 67 -1 SHEET 6 A 6 PHE A 87 ASN A 96 -1
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000