10 20 30 40 50 60 70 80 1UZO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 14-MAR-04 1UZO
TITLE CRYSTAL STRUCTURE OF SORBITOL DEHYDROGENASE FROM TITLE 2 R.SPHAEROIDES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SORBITOL DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: L-IDITOL 2-DEHYDROGENASE, POLYOL DEHYDROGENASE; COMPND 5 EC: 1.1.1.14; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 3 EXPRESSION_SYSTEM: ESCHERICHIA COLI
KEYWDS OXIDOREDUCTASE, SHORT-CHAIN DEHYDROGENASE, ENZYME
EXPDTA THEORETICAL MODEL
AUTHOR A.PHILIPPSEN,T.SCHIRMER,J.STETEFELD
REVDAT 2 06-APR-05 1UZO 1 JRNL REVDAT 1 21-MAR-05 1UZO 0
JRNL AUTH A.PHILIPPSEN,T.SCHIRMER,M.STEIN,F.GIFFHORN, JRNL AUTH 2 J.STETEFELD JRNL TITL STRUCTURE OF ZINC-INDEPENDENT SORBITOL JRNL TITL 2 DEHYDROGENASE FROM RHODOBACTER SPHAEROIDES AT 2.4 JRNL TITL 3 A RESOLUTION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 61 374 2005 JRNL REFN ASTM ABCRE6 DK ISSN 0907-4449
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.SCHAUDER,K.H.SCHNEIDER,F.GIFFHORN REMARK 1 TITL POLYOL METABOLISM OF RHODOBACTER SPHAEROIDES: REMARK 1 TITL 2 BIOCHEMICAL CHARACTERIZATION OF A SHORT-CHAIN REMARK 1 TITL 3 SORBITOL DEHYDROGENASE REMARK 1 REF MICROBIOLOGY (READING, UK) V. 141 1857 1995 REMARK 1 REFN ASTM MROBEO UK ISSN 1350-0872
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1UZO COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY EBI ON 15-MAR-2004. REMARK 100 THE EBI ID CODE IS EBI-14800.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 400 REMARK 400 COMPOUND REMARK 400 CATALYZES THE OXIDATION OF D-GLUCITOL (SORBITOL) TO D- REMARK 400 FRUCTOSE, GALACTITOL TO D-TAGATOSE AND OF L-IDITOL.
REMARK 525 REMARK 525 SOLVENT REMARK 525 THE FOLLOWING SOLVENT MOLECULES LIE FARTHER THAN EXPECTED REMARK 525 FROM THE PROTEIN OR NUCLEIC ACID MOLECULE AND MAY BE REMARK 525 ASSOCIATED WITH A SYMMETRY RELATED MOLECULE (M=MODEL REMARK 525 NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH W 1 DISTANCE = 30.49 ANGSTROMS REMARK 525 HOH W 53 DISTANCE = 25.98 ANGSTROMS REMARK 525 HOH W 107 DISTANCE = 26.77 ANGSTROMS REMARK 525 HOH W 170 DISTANCE = 32.99 ANGSTROMS REMARK 525 HOH W 176 DISTANCE = 35.87 ANGSTROMS REMARK 525 HOH W 826 DISTANCE = 34.49 ANGSTROMS REMARK 525 HOH W1395 DISTANCE = 25.22 ANGSTROMS REMARK 525 HOH W1970 DISTANCE = 27.21 ANGSTROMS REMARK 525 HOH W2103 DISTANCE = 28.37 ANGSTROMS REMARK 525 HOH W2235 DISTANCE = 24.58 ANGSTROMS REMARK 525 HOH W2367 DISTANCE = 26.99 ANGSTROMS REMARK 525 HOH W2419 DISTANCE = 30.73 ANGSTROMS REMARK 525 HOH W9288 DISTANCE = 33.78 ANGSTROMS REMARK 525 HOH W9298 DISTANCE = 22.81 ANGSTROMS REMARK 525 HOH W9370 DISTANCE = 19.25 ANGSTROMS REMARK 525 HOH W9444 DISTANCE = 28.35 ANGSTROMS REMARK 525 HOH W9495 DISTANCE = 36.43 ANGSTROMS REMARK 525 HOH W9544 DISTANCE = 18.97 ANGSTROMS REMARK 525 HOH W9616 DISTANCE = 14.05 ANGSTROMS REMARK 525 HOH W9690 DISTANCE = 21.24 ANGSTROMS REMARK 525 HOH W9741 DISTANCE = 27.60 ANGSTROMS REMARK 525 HOH W9790 DISTANCE = 21.30 ANGSTROMS REMARK 525 HOH W9862 DISTANCE = 16.27 ANGSTROMS REMARK 525 HOH W9936 DISTANCE = 24.00 ANGSTROMS REMARK 525 HOH W9987 DISTANCE = 29.82 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AS REMARK 800 SITE_DESCRIPTION: ACTIVE SITE
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1K2W RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SORBITOL DEHYDROGENASE REMARK 900 FROMR.SPHAEROIDES
DBREF 1UZO A 1 256 UNP Q59787 DHSO_RHOSH 1 256
SEQRES 1 A 256 MET ARG LEU ASP GLY LYS THR ALA LEU ILE THR GLY SER SEQRES 2 A 256 ALA ARG GLY ILE GLY ARG ALA PHE ALA GLU ALA TYR VAL SEQRES 3 A 256 ARG GLU GLY ALA ARG VAL ALA ILE ALA ASP ILE ASN LEU SEQRES 4 A 256 GLU ALA ALA ARG ALA THR ALA ALA GLU ILE GLY PRO ALA SEQRES 5 A 256 ALA CYS ALA ILE ALA LEU ASP VAL THR ASP GLN ALA SER SEQRES 6 A 256 ILE ASP ARG CYS VAL ALA GLU LEU LEU ASP ARG TRP GLY SEQRES 7 A 256 SER ILE ASP ILE LEU VAL ASN ASN ALA ALA LEU PHE ASP SEQRES 8 A 256 LEU ALA PRO ILE VAL GLU ILE THR ARG GLU SER TYR ASP SEQRES 9 A 256 ARG LEU PHE ALA ILE ASN VAL SER GLY THR LEU PHE MET SEQRES 10 A 256 MET GLN ALA VAL ALA ARG ALA MET ILE ALA GLY GLY ARG SEQRES 11 A 256 GLY GLY LYS ILE ILE ASN MET ALA SER GLN ALA GLY ARG SEQRES 12 A 256 ARG GLY GLU ALA LEU VAL GLY VAL TYR CYS ALA THR LYS SEQRES 13 A 256 ALA ALA VAL ILE SER LEU THR GLN SER ALA GLY LEU ASN SEQRES 14 A 256 LEU ILE ARG HIS GLY ILE ASN VAL ASN ALA ILE ALA PRO SEQRES 15 A 256 GLY VAL VAL ASP GLY GLU HIS TRP ASP GLY VAL ASP ALA SEQRES 16 A 256 LYS PHE ALA ASP TYR GLU ASN LEU PRO ARG GLY GLU LYS SEQRES 17 A 256 LYS ARG GLN VAL GLY ALA ALA VAL PRO PHE GLY ARG MET SEQRES 18 A 256 GLY ARG ALA GLU ASP LEU THR GLY MET ALA ILE PHE LEU SEQRES 19 A 256 ALA THR PRO GLU ALA ASP TYR ILE VAL ALA GLN THR TYR SEQRES 20 A 256 ASN VAL ASP GLY GLY ASN TRP MET SER
HET SOR A1258 18 HET NAD A1257 52
HETNAM SOR D-SORBITOL HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE
FORMUL 2 SOR C6 H14 O6 FORMUL 3 NAD C21 H27 N7 O14 P2 FORMUL 4 HOH *9920(H2 O1)
HELIX 1 1 ARG A 15 GLU A 28 1 14 HELIX 2 2 ASN A 38 GLY A 50 1 13 HELIX 3 3 ASP A 62 GLY A 78 1 17 HELIX 4 4 PRO A 94 ILE A 98 5 5 HELIX 5 5 THR A 99 VAL A 111 1 13 HELIX 6 6 VAL A 111 GLY A 129 1 19 HELIX 7 7 SER A 139 ARG A 143 5 5 HELIX 8 8 VAL A 149 ILE A 171 1 23 HELIX 9 9 HIS A 189 ASN A 202 1 14 HELIX 10 10 GLY A 206 VAL A 216 1 11 HELIX 11 11 ALA A 224 ALA A 235 1 12 HELIX 12 12 THR A 236 ASP A 240 5 5
SHEET 1 AA 7 ALA A 53 ALA A 57 0 SHEET 2 AA 7 ALA A 30 ASP A 36 1 O VAL A 32 N CYS A 54 SHEET 3 AA 7 LYS A 6 THR A 11 1 O LYS A 6 N ARG A 31 SHEET 4 AA 7 ILE A 82 ASN A 85 1 O ILE A 82 N LEU A 9 SHEET 5 AA 7 GLY A 132 MET A 137 1 O LYS A 133 N LEU A 83 SHEET 6 AA 7 ILE A 175 PRO A 182 1 O ASN A 176 N ILE A 134 SHEET 7 AA 7 THR A 246 VAL A 249 1 O TYR A 247 N ALA A 181
SITE 1 AS 4 ASN A 110 SER A 139 TYR A 152 LYS A 156
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000